RNA–Protein interactions for RNA: ENST00000471702.2

NPHP3-ACAD11-201, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

TSL 2 BASIC

Gene NPHP3-ACAD11, Length 7,784 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-201ENST00000471702 SSSCA1O60232 199 aa12.14□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 CACNG3O60359 315 aa12.14□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 EXT1Q16394 746 aa12.14□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 MFSD9Q8NBP5 474 aa12.14□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 UBTD2Q8WUN7 234 aa12.14□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 KCNE4Q8WWG9 221 aa12.14□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 MRPS24Q96EL2 167 aaKnown RBP12.14□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 ZNF835Q9Y2P0 537 aa12.14□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 SPRY3O43610 288 aa12.14□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 CDC14BO60729 498 aa12.14□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 C21orf58P58505 322 aa12.14□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 CLN3Q13286 438 aa12.14□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 ZNF519Q8TB69 540 aa12.14□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 GPR119Q8TDV5 335 aa12.14□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 CA5BP1Q8WTZ4 195 aa12.14□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 SLC46A1Q96NT5 459 aa12.14□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 NECAP2Q9NVZ3 263 aa12.14□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 C5orf52A6NGY3 159 aa12.14□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 PTTG1O95997 202 aa12.14□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 RAB40ALP0C0E4 278 aa12.14□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 ACP2P11117 423 aa12.14□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 CACNG7P62955 275 aa12.14□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 RACK1P63244 317 aaKnown RBP12.14□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 TMEM179BQ7Z7N9 219 aa12.14□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 EXD3Q8N9H8 876 aa12.14□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 RAB40AQ8WXH6 277 aa12.14□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 ST8SIA4Q92187 359 aa12.14□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 TMEM9BQ9NQ34 198 aa12.14□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 TRAV36DV7A0A075B6V5 113 aa12.14□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 PCSK6P29122 969 aa12.14□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 EIF1P41567 113 aaKnown RBP12.14□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 SHHQ15465 462 aa12.14□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 RRN3P1Q2M238 152 aa12.14□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 CXorf67Q86X51 503 aaPredicted RBP12.14□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 NUDT10Q8NFP7 164 aa12.14□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 NUDT11Q96G61 164 aa12.14□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 ZNF71Q9NQZ8 489 aaPredicted RBP12.14□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 PROCRQ9UNN8 238 aa12.14□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 REC114Q7Z4M0 266 aa12.13□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 SLC35A4Q96G79 324 aa12.13□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 CTDSP1Q9GZU7 261 aa12.13□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 SDR39U1Q9NRG7 319 aaPredicted RBP12.13□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 ADAM11O75078 769 aa12.13□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 HBE1P02100 147 aa12.13□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 NOVA1P51513 510 aaKnown RBP12.13□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 PCK2Q16822 640 aa12.13□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 PRSS45Q7RTY3 260 aa12.13□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 CMTM4Q8IZR5 234 aa12.13□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 SLC22A24Q8N4F4 322 aa12.13□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 KCNG3Q8TAE7 436 aa12.13□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 HAVCR2Q8TDQ0 301 aa12.13□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 SLC22A12Q96S37 553 aa12.13□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 CHST6Q9GZX3 395 aa12.13□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 ORM1P02763 201 aa12.13□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 IAH1Q2TAA2 248 aaPredicted RBP12.13□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 LILRA3Q8N6C8 439 aaPredicted RBP12.13□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 OR51F2Q8NH61 342 aa12.13□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 UBALD1Q8TB05 177 aa12.13□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 PDXPQ96GD0 296 aa12.13□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 PTDSS2Q9BVG9 487 aa12.13□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 TGIF2Q9GZN2 237 aa12.13□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 GPR171O14626 319 aa12.13□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 SULT1C4O75897 302 aa12.13□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 MORN1Q5T089 497 aa12.13□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 GLIPR1L1Q6UWM5 242 aa12.13□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.13□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.13□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 SH2D1BO14796 132 aa12.13□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 COL3A1P02461 1466 aaPredicted RBP12.13□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 KEAP1Q14145 624 aa12.13□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 SCN5AQ14524 2016 aa12.13□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 BTNL8Q6UX41 500 aa12.13□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 SVBPQ8N300 66 aa12.13□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 CENPOQ9BU64 300 aa12.13□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 OR52A5Q9H2C5 316 aa12.13□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 CLEC1BQ9P126 229 aa12.13□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 K7ESM1 405 aa12.13□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 PRAF2O60831 178 aa12.13□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 GCSHP23434 173 aa12.13□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 TPPP2P59282 170 aa12.13□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 IQCJQ1A5X6 159 aa12.13□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 ZNF385BQ569K4 471 aa12.13□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 COX20Q5RI15 118 aa12.13□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 RBPMS2Q6ZRY4 209 aaKnown RBP12.13□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 SEMA6DQ8NFY4 1073 aa12.13□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 ATP5SQ99766 215 aa12.13□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 MED9Q9NWA0 146 aa12.13□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 C9orf172C9J069 976 aa12.12□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 GALR2O43603 387 aaPredicted RBP12.12□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 CD40P25942 277 aa12.12□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 CASP3P42574 277 aa12.12□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 HCCSP53701 268 aa12.12□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 VEZF1Q14119 521 aa12.12□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 SCGB1D4Q6XE38 83 aa12.12□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 FIGNL2A6NMB9 653 aa12.12□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 M0R296 226 aa12.12□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 PPIHO43447 177 aaKnown RBP12.12□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 OPRM1P35372 400 aa12.12□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 ZNF140P52738 457 aaPredicted RBP12.12□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 LAX1Q8IWV1 398 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms