RNA–Protein interactions for RNA: ENST00000470687.1

UBXN4-206, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-206ENST00000470687 RBP1P09455 135 aa2.15□□□□□ -2.07
UBXN4-206ENST00000470687 ANXA4P09525 319 aaPredicted RBP2.15□□□□□ -2.07
UBXN4-206ENST00000470687 IFI6P09912 130 aa2.15□□□□□ -2.07
UBXN4-206ENST00000470687 GSTT2P0CG29 244 aa2.15□□□□□ -2.07
UBXN4-206ENST00000470687 GSTT2BP0CG30 244 aa2.15□□□□□ -2.07
UBXN4-206ENST00000470687 RNF224P0DH78 156 aa2.15□□□□□ -2.07
UBXN4-206ENST00000470687 FUT1P19526 365 aa2.15□□□□□ -2.07
UBXN4-206ENST00000470687 CSNK2A2P19784 350 aaPredicted RBP2.15□□□□□ -2.07
UBXN4-206ENST00000470687 DRD5P21918 477 aa2.15□□□□□ -2.07
UBXN4-206ENST00000470687 CPN2P22792 545 aa2.15□□□□□ -2.07
UBXN4-206ENST00000470687 ATP5A1P25705 553 aaKnown RBP2.15□□□□□ -2.07
UBXN4-206ENST00000470687 FKBP2P26885 142 aaKnown RBP2.15□□□□□ -2.07
UBXN4-206ENST00000470687 PSMB5P28074 263 aa2.15□□□□□ -2.07
UBXN4-206ENST00000470687 PTPN6P29350 595 aa2.15□□□□□ -2.07
UBXN4-206ENST00000470687 LCN1P31025 176 aa2.15□□□□□ -2.07
UBXN4-206ENST00000470687 FCGR2BP31994 310 aaPredicted RBP2.15□□□□□ -2.07
UBXN4-206ENST00000470687 FCGR2CP31995 323 aa2.15□□□□□ -2.07
UBXN4-206ENST00000470687 PRDX2P32119 198 aa2.15□□□□□ -2.07
UBXN4-206ENST00000470687 DEKP35659 375 aaKnown RBP2.15□□□□□ -2.07
UBXN4-206ENST00000470687 CHI3L1P36222 383 aaPredicted RBP2.15□□□□□ -2.07
UBXN4-206ENST00000470687 SLC1A2P43004 574 aa2.15□□□□□ -2.07
UBXN4-206ENST00000470687 BDKRB1P46663 353 aa2.15□□□□□ -2.07
UBXN4-206ENST00000470687 CRYBA2P53672 197 aa2.15□□□□□ -2.07
UBXN4-206ENST00000470687 ATP12AP54707 1039 aa2.15□□□□□ -2.07
UBXN4-206ENST00000470687 PSMD4P55036 377 aaKnown RBP2.15□□□□□ -2.07
UBXN4-206ENST00000470687 DIO3P55073 304 aa2.15□□□□□ -2.07
UBXN4-206ENST00000470687 LIM2P55344 173 aa2.15□□□□□ -2.07
UBXN4-206ENST00000470687 KCNJ2P63252 427 aa2.15□□□□□ -2.07
UBXN4-206ENST00000470687 CRADDP78560 199 aa2.15□□□□□ -2.07
UBXN4-206ENST00000470687 REEP5Q00765 189 aa2.15□□□□□ -2.07
UBXN4-206ENST00000470687 DR1Q01658 176 aa2.15□□□□□ -2.07
UBXN4-206ENST00000470687 IRF8Q02556 426 aa2.15□□□□□ -2.07
UBXN4-206ENST00000470687 TFF3Q07654 80 aa2.15□□□□□ -2.07
UBXN4-206ENST00000470687 TGFBIQ15582 683 aa2.15□□□□□ -2.07
UBXN4-206ENST00000470687 PDK4Q16654 411 aa2.15□□□□□ -2.07
UBXN4-206ENST00000470687 ECSCRQ19T08 205 aa2.15□□□□□ -2.07
UBXN4-206ENST00000470687 FAM83EQ2M2I3 478 aa2.15□□□□□ -2.07
UBXN4-206ENST00000470687 ZNF791Q3KP31 576 aaPredicted RBP2.15□□□□□ -2.07
UBXN4-206ENST00000470687 GLYR1Q49A26 553 aaPredicted RBP2.15□□□□□ -2.07
UBXN4-206ENST00000470687 ZNF876PQ49A33 203 aa2.15□□□□□ -2.07
UBXN4-206ENST00000470687 CCSMST1Q4G0I0 132 aa2.15□□□□□ -2.07
UBXN4-206ENST00000470687 KHDRBS2Q5VWX1 349 aaKnown RBP2.15□□□□□ -2.07
UBXN4-206ENST00000470687 STEAP4Q687X5 459 aa2.15□□□□□ -2.07
UBXN4-206ENST00000470687 TIGD3Q6B0B8 471 aa2.15□□□□□ -2.07
UBXN4-206ENST00000470687 OR2A2Q6IF42 318 aa2.15□□□□□ -2.07
UBXN4-206ENST00000470687 SBSNQ6UWP8 590 aa2.15□□□□□ -2.07
UBXN4-206ENST00000470687 MBOAT1Q6ZNC8 495 aa2.15□□□□□ -2.07
UBXN4-206ENST00000470687 ZNF497Q6ZNH5 498 aa2.15□□□□□ -2.07
UBXN4-206ENST00000470687 Q6ZSR9 355 aa2.15□□□□□ -2.07
UBXN4-206ENST00000470687 C3orf62Q6ZUJ4 267 aa2.15□□□□□ -2.07
UBXN4-206ENST00000470687 TGIF2LYQ8IUE0 185 aa2.15□□□□□ -2.07
UBXN4-206ENST00000470687 CCDC36Q8IYA8 594 aa2.15□□□□□ -2.07
UBXN4-206ENST00000470687 CA13Q8N1Q1 262 aa2.15□□□□□ -2.07
UBXN4-206ENST00000470687 LRRC25Q8N386 305 aaPredicted RBP2.15□□□□□ -2.07
UBXN4-206ENST00000470687 LIX1Q8N485 282 aa2.15□□□□□ -2.07
UBXN4-206ENST00000470687 FADS6Q8N9I5 356 aa2.15□□□□□ -2.07
UBXN4-206ENST00000470687 ACOT4Q8N9L9 421 aa2.15□□□□□ -2.07
UBXN4-206ENST00000470687 MAPK1IP1LQ8NDC0 245 aa2.15□□□□□ -2.07
UBXN4-206ENST00000470687 NUP37Q8NFH4 326 aa2.15□□□□□ -2.07
UBXN4-206ENST00000470687 OR2M7Q8NG81 312 aa2.15□□□□□ -2.07
UBXN4-206ENST00000470687 OR10G7Q8NGN6 311 aa2.15□□□□□ -2.07
UBXN4-206ENST00000470687 NEIL3Q8TAT5 605 aa2.15□□□□□ -2.07
UBXN4-206ENST00000470687 SPPL2AQ8TCT8 520 aa2.15□□□□□ -2.07
UBXN4-206ENST00000470687 LKAAEAR1Q8TD35 194 aa2.15□□□□□ -2.07
UBXN4-206ENST00000470687 PYROXD1Q8WU10 500 aa2.15□□□□□ -2.07
UBXN4-206ENST00000470687 SMAP2Q8WU79 429 aaPredicted RBP2.15□□□□□ -2.07
UBXN4-206ENST00000470687 PCNPQ8WW12 178 aaKnown RBP2.15□□□□□ -2.07
UBXN4-206ENST00000470687 RNASE6Q93091 150 aaKnown RBP2.15□□□□□ -2.07
UBXN4-206ENST00000470687 MRPL24Q96A35 216 aaKnown RBP2.15□□□□□ -2.07
UBXN4-206ENST00000470687 FBXO17Q96EF6 278 aa2.15□□□□□ -2.07
UBXN4-206ENST00000470687 MRPL53Q96EL3 112 aaKnown RBP2.15□□□□□ -2.07
UBXN4-206ENST00000470687 RMND5BQ96G75 393 aaPredicted RBP2.15□□□□□ -2.07
UBXN4-206ENST00000470687 LRR1Q96L50 414 aa2.15□□□□□ -2.07
UBXN4-206ENST00000470687 C2orf48Q96LS8 159 aa2.15□□□□□ -2.07
UBXN4-206ENST00000470687 OR4K3Q96R72 315 aa2.15□□□□□ -2.07
UBXN4-206ENST00000470687 RAB40CQ96S21 281 aa2.15□□□□□ -2.07
UBXN4-206ENST00000470687 SERPINI1Q99574 410 aa2.15□□□□□ -2.07
UBXN4-206ENST00000470687 SFXN3Q9BWM7 321 aa2.15□□□□□ -2.07
UBXN4-206ENST00000470687 FAIM2Q9BWQ8 316 aa2.15□□□□□ -2.07
UBXN4-206ENST00000470687 CLEC7AQ9BXN2 247 aa2.15□□□□□ -2.07
UBXN4-206ENST00000470687 ANGPTL4Q9BY76 406 aa2.15□□□□□ -2.07
UBXN4-206ENST00000470687 TTTY12Q9BZ98 90 aa2.15□□□□□ -2.07
UBXN4-206ENST00000470687 STMN4Q9H169 189 aaPredicted RBP2.15□□□□□ -2.07
UBXN4-206ENST00000470687 EXO5Q9H790 373 aa2.15□□□□□ -2.07
UBXN4-206ENST00000470687 RPF2Q9H7B2 306 aaKnown RBP2.15□□□□□ -2.07
UBXN4-206ENST00000470687 SH2D2AQ9NP31 389 aa2.15□□□□□ -2.07
UBXN4-206ENST00000470687 LZTFL1Q9NQ48 299 aa2.15□□□□□ -2.07
UBXN4-206ENST00000470687 FBXO6Q9NRD1 293 aaPredicted RBP2.15□□□□□ -2.07
UBXN4-206ENST00000470687 ATAD3AQ9NVI7 634 aa2.15□□□□□ -2.07
UBXN4-206ENST00000470687 LYARQ9NX58 379 aaKnown RBP2.15□□□□□ -2.07
UBXN4-206ENST00000470687 KLRF1Q9NZS2 232 aa2.15□□□□□ -2.07
UBXN4-206ENST00000470687 BAIAP2L1Q9UHR4 511 aa2.15□□□□□ -2.07
UBXN4-206ENST00000470687 SNX12Q9UMY4 172 aa2.15□□□□□ -2.07
UBXN4-206ENST00000470687 PACSIN2Q9UNF0 486 aaPredicted RBP2.15□□□□□ -2.07
UBXN4-206ENST00000470687 RNF6Q9Y252 685 aa2.15□□□□□ -2.07
UBXN4-206ENST00000470687 EIF3LQ9Y262 564 aaKnown RBP2.15□□□□□ -2.07
UBXN4-206ENST00000470687 SLC6A5Q9Y345 797 aa2.15□□□□□ -2.07
UBXN4-206ENST00000470687 UTP11Q9Y3A2 253 aaKnown RBP2.15□□□□□ -2.07
UBXN4-206ENST00000470687 ZNF175Q9Y473 711 aa2.15□□□□□ -2.07
UBXN4-206ENST00000470687 SAR1BQ9Y6B6 198 aa2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms