RNA–Protein interactions for RNA: ENST00000470357.1

VAMP3-202, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 3 BASIC

Gene VAMP3, Length 954 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-202ENST00000470357 SLC18B1Q6NT16 456 aa5.85□□□□□ -1.47
VAMP3-202ENST00000470357 ZNF544Q6NX49 715 aa5.85□□□□□ -1.47
VAMP3-202ENST00000470357 KCTD18Q6PI47 426 aaPredicted RBP5.85□□□□□ -1.47
VAMP3-202ENST00000470357 SLC25A47Q6Q0C1 308 aa5.85□□□□□ -1.47
VAMP3-202ENST00000470357 RHOUQ7L0Q8 258 aa5.85□□□□□ -1.47
VAMP3-202ENST00000470357 FAM220AQ7Z4H9 259 aa5.85□□□□□ -1.47
VAMP3-202ENST00000470357 ERI1Q8IV48 349 aaKnown RBP5.85□□□□□ -1.47
VAMP3-202ENST00000470357 TIGD4Q8IY51 512 aa5.85□□□□□ -1.47
VAMP3-202ENST00000470357 C20orf196Q8IYI0 205 aa5.85□□□□□ -1.47
VAMP3-202ENST00000470357 ZNF100Q8IYN0 542 aa5.85□□□□□ -1.47
VAMP3-202ENST00000470357 CELF2-AS1Q8N7Q2 184 aa5.85□□□□□ -1.47
VAMP3-202ENST00000470357 ZIC4Q8N9L1 334 aa5.85□□□□□ -1.47
VAMP3-202ENST00000470357 SLC26A10Q8NG04 563 aa5.85□□□□□ -1.47
VAMP3-202ENST00000470357 OR4F15Q8NGB8 312 aa5.85□□□□□ -1.47
VAMP3-202ENST00000470357 OR51L1Q8NGJ5 315 aa5.85□□□□□ -1.47
VAMP3-202ENST00000470357 OR6N2Q8NGY6 317 aa5.85□□□□□ -1.47
VAMP3-202ENST00000470357 ZNF420Q8TAQ5 688 aaPredicted RBP5.85□□□□□ -1.47
VAMP3-202ENST00000470357 FNDC9Q8TBE3 224 aa5.85□□□□□ -1.47
VAMP3-202ENST00000470357 ABHD3Q8WU67 409 aa5.85□□□□□ -1.47
VAMP3-202ENST00000470357 SNX33Q8WV41 574 aa5.85□□□□□ -1.47
VAMP3-202ENST00000470357 MCHR2Q969V1 340 aa5.85□□□□□ -1.47
VAMP3-202ENST00000470357 APH1AQ96BI3 265 aa5.85□□□□□ -1.47
VAMP3-202ENST00000470357 NMD3Q96D46 503 aaKnown RBP5.85□□□□□ -1.47
VAMP3-202ENST00000470357 COG8Q96MW5 612 aa5.85□□□□□ -1.47
VAMP3-202ENST00000470357 ZNF385AQ96PM9 386 aaKnown RBP5.85□□□□□ -1.47
VAMP3-202ENST00000470357 MGLLQ99685 303 aa5.85□□□□□ -1.47
VAMP3-202ENST00000470357 BCL7BQ9BQE9 202 aa5.85□□□□□ -1.47
VAMP3-202ENST00000470357 TTYH2Q9BSA4 534 aa5.85□□□□□ -1.47
VAMP3-202ENST00000470357 RHNO1Q9BSD3 238 aa5.85□□□□□ -1.47
VAMP3-202ENST00000470357 EMC6Q9BV81 110 aa5.85□□□□□ -1.47
VAMP3-202ENST00000470357 SLCO5A1Q9H2Y9 848 aa5.85□□□□□ -1.47
VAMP3-202ENST00000470357 TRIM36Q9NQ86 728 aa5.85□□□□□ -1.47
VAMP3-202ENST00000470357 CLCF1Q9UBD9 225 aa5.85□□□□□ -1.47
VAMP3-202ENST00000470357 ERRFI1Q9UJM3 462 aaPredicted RBP5.85□□□□□ -1.47
VAMP3-202ENST00000470357 LAMP5Q9UJQ1 280 aa5.85□□□□□ -1.47
VAMP3-202ENST00000470357 NCOA6Q14686 2063 aaPredicted RBP5.85□□□□□ -1.47
VAMP3-202ENST00000470357 POLEQ07864 2286 aa5.85□□□□□ -1.47
VAMP3-202ENST00000470357 FREM1Q5H8C1 2179 aa5.84□□□□□ -1.47
VAMP3-202ENST00000470357 INTS1Q8N201 2190 aaKnown RBP5.84□□□□□ -1.47
VAMP3-202ENST00000470357 CCDC168Q8NDH2 2452 aa5.84□□□□□ -1.47
VAMP3-202ENST00000470357 ARPC4-TTLL3A0A0A6YYG9 625 aa5.84□□□□□ -1.47
VAMP3-202ENST00000470357 A0A1W2PPL8 197 aa5.84□□□□□ -1.47
VAMP3-202ENST00000470357 A0A1W2PQL4 384 aaPredicted RBP5.84□□□□□ -1.47
VAMP3-202ENST00000470357 ZNF587BE7ETH6 402 aa5.84□□□□□ -1.47
VAMP3-202ENST00000470357 ZNF701M0R085 212 aaPredicted RBP5.84□□□□□ -1.47
VAMP3-202ENST00000470357 DCTN6O00399 190 aa5.84□□□□□ -1.47
VAMP3-202ENST00000470357 ZNF593O00488 134 aaPredicted RBP5.84□□□□□ -1.47
VAMP3-202ENST00000470357 DHHO43323 396 aa5.84□□□□□ -1.47
VAMP3-202ENST00000470357 ZNF254O75437 659 aa5.84□□□□□ -1.47
VAMP3-202ENST00000470357 FARS2O95363 451 aaKnown RBP5.84□□□□□ -1.47
VAMP3-202ENST00000470357 PTHP01270 115 aa5.84□□□□□ -1.47
VAMP3-202ENST00000470357 SCG5P05408 212 aa5.84□□□□□ -1.47
VAMP3-202ENST00000470357 KRT8P05787 483 aa5.84□□□□□ -1.47
VAMP3-202ENST00000470357 TPOP07202 933 aa5.84□□□□□ -1.47
VAMP3-202ENST00000470357 MRPL3P09001 348 aaKnown RBP5.84□□□□□ -1.47
VAMP3-202ENST00000470357 LIMS3P0CW19 117 aa5.84□□□□□ -1.47
VAMP3-202ENST00000470357 LIMS4P0CW20 117 aa5.84□□□□□ -1.47
VAMP3-202ENST00000470357 CD53P19397 219 aa5.84□□□□□ -1.47
VAMP3-202ENST00000470357 KLK2P20151 261 aa5.84□□□□□ -1.47
VAMP3-202ENST00000470357 MSR1P21757 451 aa5.84□□□□□ -1.47
VAMP3-202ENST00000470357 AGTR1P30556 359 aa5.84□□□□□ -1.47
VAMP3-202ENST00000470357 NAA10P41227 235 aaPredicted RBP5.84□□□□□ -1.47
VAMP3-202ENST00000470357 MAP2K4P45985 399 aa5.84□□□□□ -1.47
VAMP3-202ENST00000470357 ETV1P50549 477 aa5.84□□□□□ -1.47
VAMP3-202ENST00000470357 GBX2P52951 348 aaPredicted RBP5.84□□□□□ -1.47
VAMP3-202ENST00000470357 CASP6P55212 293 aa5.84□□□□□ -1.47
VAMP3-202ENST00000470357 ERVFRD-1P60508 538 aa5.84□□□□□ -1.47
VAMP3-202ENST00000470357 ADAM8P78325 824 aa5.84□□□□□ -1.47
VAMP3-202ENST00000470357 MRPS34P82930 218 aaKnown RBP5.84□□□□□ -1.47
VAMP3-202ENST00000470357 SRSF3P84103 164 aaKnown RBP5.84□□□□□ -1.47
VAMP3-202ENST00000470357 RUNX1T1Q06455 604 aa5.84□□□□□ -1.47
VAMP3-202ENST00000470357 PIGFQ07326 219 aa5.84□□□□□ -1.47
VAMP3-202ENST00000470357 GPR50Q13585 617 aa5.84□□□□□ -1.47
VAMP3-202ENST00000470357 RAB39AQ14964 217 aa5.84□□□□□ -1.47
VAMP3-202ENST00000470357 C3AR1Q16581 482 aa5.84□□□□□ -1.47
VAMP3-202ENST00000470357 PCK2Q16822 640 aa5.84□□□□□ -1.47
VAMP3-202ENST00000470357 KRTAP21-3Q3LHN1 58 aa5.84□□□□□ -1.47
VAMP3-202ENST00000470357 ACSF3Q4G176 576 aaPredicted RBP5.84□□□□□ -1.47
VAMP3-202ENST00000470357 CCDC58Q4VC31 144 aa5.84□□□□□ -1.47
VAMP3-202ENST00000470357 C1orf185Q5T7R7 199 aa5.84□□□□□ -1.47
VAMP3-202ENST00000470357 LCE3BQ5TA77 95 aa5.84□□□□□ -1.47
VAMP3-202ENST00000470357 CARD17Q5XLA6 110 aa5.84□□□□□ -1.47
VAMP3-202ENST00000470357 DEGS2Q6QHC5 323 aa5.84□□□□□ -1.47
VAMP3-202ENST00000470357 ZNF322Q6U7Q0 402 aaPredicted RBP5.84□□□□□ -1.47
VAMP3-202ENST00000470357 FOXL2NBQ6ZUU3 175 aa5.84□□□□□ -1.47
VAMP3-202ENST00000470357 FGD2Q7Z6J4 655 aa5.84□□□□□ -1.47
VAMP3-202ENST00000470357 DPPA2Q7Z7J5 298 aa5.84□□□□□ -1.47
VAMP3-202ENST00000470357 LHFPL3Q86UP9 236 aa5.84□□□□□ -1.47
VAMP3-202ENST00000470357 CDC20BQ86Y33 519 aa5.84□□□□□ -1.47
VAMP3-202ENST00000470357 CISD2Q8N5K1 135 aaKnown RBP5.84□□□□□ -1.47
VAMP3-202ENST00000470357 Q8NA96 180 aa5.84□□□□□ -1.47
VAMP3-202ENST00000470357 OR13F1Q8NGS4 319 aa5.84□□□□□ -1.47
VAMP3-202ENST00000470357 OR2AJ1Q8NGZ0 328 aa5.84□□□□□ -1.47
VAMP3-202ENST00000470357 OTOSQ8NHW6 89 aa5.84□□□□□ -1.47
VAMP3-202ENST00000470357 FAM57AQ8TBR7 257 aa5.84□□□□□ -1.47
VAMP3-202ENST00000470357 SGCDQ92629 289 aa5.84□□□□□ -1.47
VAMP3-202ENST00000470357 TSSK2Q96PF2 358 aa5.84□□□□□ -1.47
VAMP3-202ENST00000470357 TRIB1Q96RU8 372 aa5.84□□□□□ -1.47
VAMP3-202ENST00000470357 SLX1AQ9BQ83 275 aa5.84□□□□□ -1.47
VAMP3-202ENST00000470357 ALG8Q9BVK2 526 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms