RNA–Protein interactions for RNA: ENST00000470167.1

COL3A1-205, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 628 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-205ENST00000470167 TAS2R14Q9NYV8 317 aa4.6□□□□□ -1.67
COL3A1-205ENST00000470167 ARMCX1Q9P291 453 aa4.6□□□□□ -1.67
COL3A1-205ENST00000470167 ABI3Q9P2A4 366 aa4.6□□□□□ -1.67
COL3A1-205ENST00000470167 ZNF629Q9UEG4 869 aaPredicted RBP4.6□□□□□ -1.67
COL3A1-205ENST00000470167 SS18L2Q9UHA2 77 aa4.6□□□□□ -1.67
COL3A1-205ENST00000470167 IKZF2Q9UKS7 526 aa4.6□□□□□ -1.67
COL3A1-205ENST00000470167 DAPP1Q9UN19 280 aa4.6□□□□□ -1.67
COL3A1-205ENST00000470167 YBX2Q9Y2T7 364 aaKnown RBP4.6□□□□□ -1.67
COL3A1-205ENST00000470167 MEMO1Q9Y316 297 aa4.6□□□□□ -1.67
COL3A1-205ENST00000470167 WDR45Q9Y484 360 aa4.6□□□□□ -1.67
COL3A1-205ENST00000470167 ADGRB2O60241 1585 aa4.6□□□□□ -1.67
COL3A1-205ENST00000470167 SPHKAPQ2M3C7 1700 aa4.6□□□□□ -1.67
COL3A1-205ENST00000470167 CRYBG1Q9Y4K1 1723 aa4.6□□□□□ -1.67
COL3A1-205ENST00000470167 TCRBV3S1A0A5B6 114 aa4.59□□□□□ -1.67
COL3A1-205ENST00000470167 ANKRD20A5PA0PJZ0 165 aa4.59□□□□□ -1.67
COL3A1-205ENST00000470167 PRSS37A4D1T9 235 aa4.59□□□□□ -1.67
COL3A1-205ENST00000470167 SMIM9A6NGZ8 99 aa4.59□□□□□ -1.67
COL3A1-205ENST00000470167 ARL5CA6NH57 179 aa4.59□□□□□ -1.67
COL3A1-205ENST00000470167 FAM90A27PA6NNH2 459 aa4.59□□□□□ -1.67
COL3A1-205ENST00000470167 C21orf140B9A014 251 aa4.59□□□□□ -1.67
COL3A1-205ENST00000470167 PPP1R2P9O14990 202 aa4.59□□□□□ -1.67
COL3A1-205ENST00000470167 ARPC1BO15143 372 aaKnown RBP4.59□□□□□ -1.67
COL3A1-205ENST00000470167 OR7C2O60412 319 aa4.59□□□□□ -1.67
COL3A1-205ENST00000470167 ETHE1O95571 254 aa4.59□□□□□ -1.67
COL3A1-205ENST00000470167 RAB36O95755 333 aa4.59□□□□□ -1.67
COL3A1-205ENST00000470167 JCHAINP01591 159 aa4.59□□□□□ -1.67
COL3A1-205ENST00000470167 RNASE1P07998 156 aaKnown RBP4.59□□□□□ -1.67
COL3A1-205ENST00000470167 DBHP09172 617 aa4.59□□□□□ -1.67
COL3A1-205ENST00000470167 MPC1LP0DKB6 136 aa4.59□□□□□ -1.67
COL3A1-205ENST00000470167 OR5H8P0DN80 308 aa4.59□□□□□ -1.67
COL3A1-205ENST00000470167 LIPCP11150 499 aa4.59□□□□□ -1.67
COL3A1-205ENST00000470167 HSD17B1P14061 328 aa4.59□□□□□ -1.67
COL3A1-205ENST00000470167 CHRNB2P17787 502 aa4.59□□□□□ -1.67
COL3A1-205ENST00000470167 ADCYAP1P18509 176 aa4.59□□□□□ -1.67
COL3A1-205ENST00000470167 SDHBP21912 280 aa4.59□□□□□ -1.67
COL3A1-205ENST00000470167 CHATP28329 748 aa4.59□□□□□ -1.67
COL3A1-205ENST00000470167 GABRR2P28476 465 aa4.59□□□□□ -1.67
COL3A1-205ENST00000470167 ADORA2AP29274 412 aa4.59□□□□□ -1.67
COL3A1-205ENST00000470167 NPBWR1P48145 328 aa4.59□□□□□ -1.67
COL3A1-205ENST00000470167 GAS1P54826 345 aa4.59□□□□□ -1.67
COL3A1-205ENST00000470167 RAG2P55895 527 aa4.59□□□□□ -1.67
COL3A1-205ENST00000470167 CLDN12P56749 244 aa4.59□□□□□ -1.67
COL3A1-205ENST00000470167 PIGPP57054 158 aa4.59□□□□□ -1.67
COL3A1-205ENST00000470167 RIPPLY3P57055 190 aa4.59□□□□□ -1.67
COL3A1-205ENST00000470167 RPS16P62249 146 aaKnown RBP4.59□□□□□ -1.67
COL3A1-205ENST00000470167 YBX1P67809 324 aaKnown RBP4.59□□□□□ -1.67
COL3A1-205ENST00000470167 MRPS34P82930 218 aaKnown RBP4.59□□□□□ -1.67
COL3A1-205ENST00000470167 HOXC5Q00444 222 aa4.59□□□□□ -1.67
COL3A1-205ENST00000470167 PTPRJQ12913 1337 aa4.59□□□□□ -1.67
COL3A1-205ENST00000470167 TUSC3Q13454 348 aa4.59□□□□□ -1.67
COL3A1-205ENST00000470167 CEACAM7Q14002 265 aa4.59□□□□□ -1.67
COL3A1-205ENST00000470167 EBPQ15125 230 aaKnown RBP4.59□□□□□ -1.67
COL3A1-205ENST00000470167 ZIC1Q15915 447 aa4.59□□□□□ -1.67
COL3A1-205ENST00000470167 SNAI3Q3KNW1 292 aa4.59□□□□□ -1.67
COL3A1-205ENST00000470167 TFDP3Q5H9I0 405 aa4.59□□□□□ -1.67
COL3A1-205ENST00000470167 C3orf38Q5JPI3 329 aa4.59□□□□□ -1.67
COL3A1-205ENST00000470167 TMEM69Q5SWH9 247 aa4.59□□□□□ -1.67
COL3A1-205ENST00000470167 FAM78BQ5VT40 261 aa4.59□□□□□ -1.67
COL3A1-205ENST00000470167 TMEM268Q5VZI3 342 aa4.59□□□□□ -1.67
COL3A1-205ENST00000470167 CST9Q5W186 159 aa4.59□□□□□ -1.67
COL3A1-205ENST00000470167 LAIR1Q6GTX8 287 aa4.59□□□□□ -1.67
COL3A1-205ENST00000470167 FAM71F2Q6NXP2 309 aa4.59□□□□□ -1.67
COL3A1-205ENST00000470167 FAAP20Q6NZ36 180 aa4.59□□□□□ -1.67
COL3A1-205ENST00000470167 DHRS11Q6UWP2 260 aa4.59□□□□□ -1.67
COL3A1-205ENST00000470167 MOB3CQ70IA8 216 aa4.59□□□□□ -1.67
COL3A1-205ENST00000470167 TRMT1LQ7Z2T5 733 aaKnown RBP4.59□□□□□ -1.67
COL3A1-205ENST00000470167 C6orf120Q7Z4R8 191 aa4.59□□□□□ -1.67
COL3A1-205ENST00000470167 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.59□□□□□ -1.67
COL3A1-205ENST00000470167 TMPRSS12Q86WS5 348 aa4.59□□□□□ -1.67
COL3A1-205ENST00000470167 DOLPP1Q86YN1 238 aa4.59□□□□□ -1.67
COL3A1-205ENST00000470167 TP53INP2Q8IXH6 220 aa4.59□□□□□ -1.67
COL3A1-205ENST00000470167 YAF2Q8IY57 180 aa4.59□□□□□ -1.67
COL3A1-205ENST00000470167 DEFB107AQ8IZN7 70 aa4.59□□□□□ -1.67
COL3A1-205ENST00000470167 PELI3Q8N2H9 469 aa4.59□□□□□ -1.67
COL3A1-205ENST00000470167 BPIFB2Q8N4F0 458 aa4.59□□□□□ -1.67
COL3A1-205ENST00000470167 ARIH2OSQ8N7S6 290 aa4.59□□□□□ -1.67
COL3A1-205ENST00000470167 ACOT4Q8N9L9 421 aa4.59□□□□□ -1.67
COL3A1-205ENST00000470167 RNF149Q8NC42 400 aa4.59□□□□□ -1.67
COL3A1-205ENST00000470167 OR9Q2Q8NGE9 314 aa4.59□□□□□ -1.67
COL3A1-205ENST00000470167 OR1J2Q8NGS2 313 aa4.59□□□□□ -1.67
COL3A1-205ENST00000470167 GALMQ96C23 342 aa4.59□□□□□ -1.67
COL3A1-205ENST00000470167 SCRN2Q96FV2 425 aa4.59□□□□□ -1.67
COL3A1-205ENST00000470167 SNX22Q96L94 193 aa4.59□□□□□ -1.67
COL3A1-205ENST00000470167 RDH12Q96NR8 316 aa4.59□□□□□ -1.67
COL3A1-205ENST00000470167 ACCSQ96QU6 501 aa4.59□□□□□ -1.67
COL3A1-205ENST00000470167 RAB40CQ96S21 281 aa4.59□□□□□ -1.67
COL3A1-205ENST00000470167 ATOH8Q96SQ7 321 aa4.59□□□□□ -1.67
COL3A1-205ENST00000470167 MEIS3Q99687 375 aa4.59□□□□□ -1.67
COL3A1-205ENST00000470167 SIGMAR1Q99720 223 aa4.59□□□□□ -1.67
COL3A1-205ENST00000470167 SPAG8Q99932 426 aaPredicted RBP4.59□□□□□ -1.67
COL3A1-205ENST00000470167 SRSF8Q9BRL6 282 aaKnown RBP4.59□□□□□ -1.67
COL3A1-205ENST00000470167 CBWD1Q9BRT8 395 aa4.59□□□□□ -1.67
COL3A1-205ENST00000470167 LMF2Q9BU23 707 aaKnown RBP4.59□□□□□ -1.67
COL3A1-205ENST00000470167 RNF26Q9BY78 433 aaPredicted RBP4.59□□□□□ -1.67
COL3A1-205ENST00000470167 NMNAT2Q9BZQ4 307 aa4.59□□□□□ -1.67
COL3A1-205ENST00000470167 TMEM231Q9H6L2 316 aa4.59□□□□□ -1.67
COL3A1-205ENST00000470167 ZMAT4Q9H898 229 aa4.59□□□□□ -1.67
COL3A1-205ENST00000470167 MANSC1Q9H8J5 431 aa4.59□□□□□ -1.67
COL3A1-205ENST00000470167 TNFRSF12AQ9NP84 129 aa4.59□□□□□ -1.67
COL3A1-205ENST00000470167 CBLN4Q9NTU7 201 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms