RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 EIF2AK4Q9P2K8 1649 aaKnown RBP3.3□□□□□ -1.88
LSM5-209ENST00000468872 MAP3K15Q6ZN16 1313 aa3.29□□□□□ -1.88
LSM5-209ENST00000468872 TTC21AQ8NDW8 1320 aa3.29□□□□□ -1.88
LSM5-209ENST00000468872 TRBV6-6A0A0A6YYG2 114 aa3.29□□□□□ -1.88
LSM5-209ENST00000468872 A0A0B4J2A0 478 aa3.29□□□□□ -1.88
LSM5-209ENST00000468872 PLAC8L1A1L4L8 177 aa3.29□□□□□ -1.88
LSM5-209ENST00000468872 LRRIQ3A6PVS8 624 aaPredicted RBP3.29□□□□□ -1.88
LSM5-209ENST00000468872 HIDE1A8MVS5 230 aa3.29□□□□□ -1.88
LSM5-209ENST00000468872 CDC7O00311 574 aa3.29□□□□□ -1.88
LSM5-209ENST00000468872 LAD1O00515 517 aa3.29□□□□□ -1.88
LSM5-209ENST00000468872 XKRYO14609 159 aa3.29□□□□□ -1.88
LSM5-209ENST00000468872 EIF3HO15372 352 aaKnown RBP eCLIP3.29□□□□□ -1.88
LSM5-209ENST00000468872 KLHL41O60662 606 aa3.29□□□□□ -1.88
LSM5-209ENST00000468872 UTS2O95399 124 aa3.29□□□□□ -1.88
LSM5-209ENST00000468872 H6PDO95479 791 aa3.29□□□□□ -1.88
LSM5-209ENST00000468872 C6orf47O95873 294 aa3.29□□□□□ -1.88
LSM5-209ENST00000468872 BGLAPP02818 100 aa3.29□□□□□ -1.88
LSM5-209ENST00000468872 PNMA6AP0CW24 399 aaPredicted RBP3.29□□□□□ -1.88
LSM5-209ENST00000468872 MGMTP16455 207 aa3.29□□□□□ -1.88
LSM5-209ENST00000468872 CCR6P51684 374 aa3.29□□□□□ -1.88
LSM5-209ENST00000468872 RPS15P62841 145 aaKnown RBP3.29□□□□□ -1.88
LSM5-209ENST00000468872 PAX5Q02548 391 aa3.29□□□□□ -1.88
LSM5-209ENST00000468872 SMARCB1Q12824 385 aa3.29□□□□□ -1.88
LSM5-209ENST00000468872 ECH1Q13011 328 aa3.29□□□□□ -1.88
LSM5-209ENST00000468872 CHRNA6Q15825 494 aa3.29□□□□□ -1.88
LSM5-209ENST00000468872 TMEM183BQ1AE95 376 aa3.29□□□□□ -1.88
LSM5-209ENST00000468872 TMEM255AQ5JRV8 349 aa3.29□□□□□ -1.88
LSM5-209ENST00000468872 PEX26Q7Z412 305 aa3.29□□□□□ -1.88
LSM5-209ENST00000468872 C6orf120Q7Z4R8 191 aa3.29□□□□□ -1.88
LSM5-209ENST00000468872 MMAAQ8IVH4 418 aaKnown RBP3.29□□□□□ -1.88
LSM5-209ENST00000468872 TMEM183AQ8IXX5 376 aa3.29□□□□□ -1.88
LSM5-209ENST00000468872 OR4C5Q8NGB2 326 aa3.29□□□□□ -1.88
LSM5-209ENST00000468872 OR10R2Q8NGX6 335 aa3.29□□□□□ -1.88
LSM5-209ENST00000468872 SLC7A13Q8TCU3 470 aa3.29□□□□□ -1.88
LSM5-209ENST00000468872 IL22RA2Q969J5 263 aa3.29□□□□□ -1.88
LSM5-209ENST00000468872 PIK3IP1Q96FE7 263 aa3.29□□□□□ -1.88
LSM5-209ENST00000468872 ZNF799Q96GE5 643 aa3.29□□□□□ -1.88
LSM5-209ENST00000468872 TSNARE1Q96NA8 513 aa3.29□□□□□ -1.88
LSM5-209ENST00000468872 TGS1Q96RS0 853 aaKnown RBP3.29□□□□□ -1.88
LSM5-209ENST00000468872 C20orf24Q9BUV8 137 aa3.29□□□□□ -1.88
LSM5-209ENST00000468872 CDC42EP4Q9H3Q1 356 aaKnown RBP3.29□□□□□ -1.88
LSM5-209ENST00000468872 STOX2Q9P2F5 926 aaPredicted RBP3.29□□□□□ -1.88
LSM5-209ENST00000468872 SHPKQ9UHJ6 478 aa3.29□□□□□ -1.88
LSM5-209ENST00000468872 KIAA1257Q9ULG3 409 aa3.29□□□□□ -1.88
LSM5-209ENST00000468872 ADAMTSL1Q8N6G6 1762 aa3.29□□□□□ -1.88
LSM5-209ENST00000468872 TEX15Q9BXT5 2789 aa3.29□□□□□ -1.88
LSM5-209ENST00000468872 ITSN1Q15811 1721 aa3.29□□□□□ -1.88
LSM5-209ENST00000468872 SMG1Q96Q15 3661 aaKnown RBP3.29□□□□□ -1.88
LSM5-209ENST00000468872 KALRNO60229 2985 aa3.28□□□□□ -1.88
LSM5-209ENST00000468872 MTUS2Q5JR59 1369 aa3.28□□□□□ -1.88
LSM5-209ENST00000468872 GTF3C1Q12789 2109 aa3.28□□□□□ -1.88
LSM5-209ENST00000468872 NFASCO94856 1347 aa3.28□□□□□ -1.88
LSM5-209ENST00000468872 CNOT1A5YKK6 2376 aaKnown RBP3.28□□□□□ -1.88
LSM5-209ENST00000468872 TRAV39A0A0B4J263 110 aa3.28□□□□□ -1.88
LSM5-209ENST00000468872 PRSS37A4D1T9 235 aa3.28□□□□□ -1.88
LSM5-209ENST00000468872 SMCO2A6NFE2 343 aa3.28□□□□□ -1.88
LSM5-209ENST00000468872 SPECC1L-ADORA2AF8WAN1 911 aa3.28□□□□□ -1.88
LSM5-209ENST00000468872 PES1O00541 588 aaKnown RBP3.28□□□□□ -1.88
LSM5-209ENST00000468872 AIM2O14862 343 aa3.28□□□□□ -1.88
LSM5-209ENST00000468872 SS18L1O75177 396 aaPredicted RBP3.28□□□□□ -1.88
LSM5-209ENST00000468872 CDH16O75309 829 aa3.28□□□□□ -1.88
LSM5-209ENST00000468872 OR2F2O95006 317 aa3.28□□□□□ -1.88
LSM5-209ENST00000468872 SMIM10L1P0DMW3 83 aa3.28□□□□□ -1.88
LSM5-209ENST00000468872 AK4P27144 223 aaPredicted RBP3.28□□□□□ -1.88
LSM5-209ENST00000468872 OTX1P32242 354 aaPredicted RBP3.28□□□□□ -1.88
LSM5-209ENST00000468872 HRH1P35367 487 aa3.28□□□□□ -1.88
LSM5-209ENST00000468872 CXCL5P42830 114 aa3.28□□□□□ -1.88
LSM5-209ENST00000468872 SYKP43405 635 aa3.28□□□□□ -1.88
LSM5-209ENST00000468872 NUTF2P61970 127 aaKnown RBP3.28□□□□□ -1.88
LSM5-209ENST00000468872 TTLL9Q3SXZ7 439 aa3.28□□□□□ -1.88
LSM5-209ENST00000468872 PIGGQ5H8A4 983 aa3.28□□□□□ -1.88
LSM5-209ENST00000468872 SOHLH1Q5JUK2 328 aa3.28□□□□□ -1.88
LSM5-209ENST00000468872 SPANXN2Q5MJ10 180 aa3.28□□□□□ -1.88
LSM5-209ENST00000468872 PPM1LQ5SGD2 360 aa3.28□□□□□ -1.88
LSM5-209ENST00000468872 C9orf135Q5VTT2 229 aa3.28□□□□□ -1.88
LSM5-209ENST00000468872 SPECC1LQ69YQ0 1117 aa3.28□□□□□ -1.88
LSM5-209ENST00000468872 LYPD2Q6UXB3 125 aa3.28□□□□□ -1.88
LSM5-209ENST00000468872 CERS6Q6ZMG9 384 aa3.28□□□□□ -1.88
LSM5-209ENST00000468872 KRTAP5-2Q701N4 177 aa3.28□□□□□ -1.88
LSM5-209ENST00000468872 STPG2Q8N412 459 aa3.28□□□□□ -1.88
LSM5-209ENST00000468872 CCDC148Q8NFR7 591 aa3.28□□□□□ -1.88
LSM5-209ENST00000468872 OR5B3Q8NH48 314 aa3.28□□□□□ -1.88
LSM5-209ENST00000468872 ZNF502Q8TBZ5 544 aa3.28□□□□□ -1.88
LSM5-209ENST00000468872 MCUR1Q96AQ8 359 aa3.28□□□□□ -1.88
LSM5-209ENST00000468872 SMIM10Q96HG1 83 aa3.28□□□□□ -1.88
LSM5-209ENST00000468872 FAM210BQ96KR6 192 aa3.28□□□□□ -1.88
LSM5-209ENST00000468872 P2RX4Q99571 388 aa3.28□□□□□ -1.88
LSM5-209ENST00000468872 WSB1Q9Y6I7 421 aa3.28□□□□□ -1.88
LSM5-209ENST00000468872 CLTCL1P53675 1640 aa3.28□□□□□ -1.88
LSM5-209ENST00000468872 MYO15AQ9UKN7 3530 aa3.28□□□□□ -1.88
LSM5-209ENST00000468872 C2CD3Q4AC94 2353 aa3.27□□□□□ -1.89
LSM5-209ENST00000468872 NAV3Q8IVL0 2385 aa3.27□□□□□ -1.89
LSM5-209ENST00000468872 ARHGEF10O15013 1369 aa3.27□□□□□ -1.89
LSM5-209ENST00000468872 CTTNBP2Q8WZ74 1663 aa3.27□□□□□ -1.89
LSM5-209ENST00000468872 IGKV6D-21A0A0A0MT36 114 aa3.27□□□□□ -1.89
LSM5-209ENST00000468872 ZNF816-ZNF321PA0A0X1KG74 233 aa3.27□□□□□ -1.89
LSM5-209ENST00000468872 CIB4A0PJX0 185 aa3.27□□□□□ -1.89
LSM5-209ENST00000468872 CD5LO43866 347 aa3.27□□□□□ -1.89
LSM5-209ENST00000468872 CHST1O43916 411 aa3.27□□□□□ -1.89
LSM5-209ENST00000468872 CA11O75493 328 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms