RNA–Protein interactions for RNA: ENST00000468653.5

SMC4-209, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-209ENST00000468653 P4HA3Q7Z4N8 544 aa16.72■□□□□ 0.27
SMC4-209ENST00000468653 GJC3Q8NFK1 279 aa16.72■□□□□ 0.27
SMC4-209ENST00000468653 PPP1R14AQ96A00 147 aa16.72■□□□□ 0.27
SMC4-209ENST00000468653 SARAFQ96BY9 339 aa16.72■□□□□ 0.27
SMC4-209ENST00000468653 DERL3Q96Q80 235 aa16.72■□□□□ 0.27
SMC4-209ENST00000468653 LINC00470Q9BZP3 86 aa16.72■□□□□ 0.27
SMC4-209ENST00000468653 NIPAL2Q9H841 368 aa16.72■□□□□ 0.27
SMC4-209ENST00000468653 BRD7Q9NPI1 651 aa16.72■□□□□ 0.27
SMC4-209ENST00000468653 B3GNT3Q9Y2A9 372 aa16.72■□□□□ 0.27
SMC4-209ENST00000468653 ASPMQ8IZT6 3477 aa16.71■□□□□ 0.27
SMC4-209ENST00000468653 TRBV5-5A0A0J9YX44 114 aa16.71■□□□□ 0.27
SMC4-209ENST00000468653 J3QRK9 145 aa16.71■□□□□ 0.27
SMC4-209ENST00000468653 WISP2O76076 250 aa16.71■□□□□ 0.27
SMC4-209ENST00000468653 TGM6O95932 706 aa16.71■□□□□ 0.27
SMC4-209ENST00000468653 MMP16P51512 607 aa16.71■□□□□ 0.27
SMC4-209ENST00000468653 SIAH3Q8IW03 269 aa16.71■□□□□ 0.27
SMC4-209ENST00000468653 TSEN15Q8WW01 171 aaKnown RBP16.71■□□□□ 0.27
SMC4-209ENST00000468653 APH1AQ96BI3 265 aa16.71■□□□□ 0.27
SMC4-209ENST00000468653 FOXB1Q99853 325 aa16.71■□□□□ 0.27
SMC4-209ENST00000468653 SLC24A3Q9HC58 644 aa16.71■□□□□ 0.27
SMC4-209ENST00000468653 H3BSH0 61 aa16.7■□□□□ 0.26
SMC4-209ENST00000468653 TAF4O00268 1085 aa16.7■□□□□ 0.26
SMC4-209ENST00000468653 PIN1P1O15428 100 aa16.7■□□□□ 0.26
SMC4-209ENST00000468653 SRMP19623 302 aa16.7■□□□□ 0.26
SMC4-209ENST00000468653 RAB3BP20337 219 aa16.7■□□□□ 0.26
SMC4-209ENST00000468653 TBR1Q16650 682 aa16.7■□□□□ 0.26
SMC4-209ENST00000468653 BCL2L15Q5TBC7 163 aa16.7■□□□□ 0.26
SMC4-209ENST00000468653 ZNF100Q8IYN0 542 aa16.7■□□□□ 0.26
SMC4-209ENST00000468653 MFSD4AQ8N468 514 aa16.7■□□□□ 0.26
SMC4-209ENST00000468653 OR10AC1Q8NH08 325 aa16.7■□□□□ 0.26
SMC4-209ENST00000468653 ABHD17AQ96GS6 310 aa16.7■□□□□ 0.26
SMC4-209ENST00000468653 PNRC2Q9NPJ4 139 aaKnown RBP16.7■□□□□ 0.26
SMC4-209ENST00000468653 G6PC2Q9NQR9 355 aa16.7■□□□□ 0.26
SMC4-209ENST00000468653 SLC7A10Q9NS82 523 aa16.7■□□□□ 0.26
SMC4-209ENST00000468653 CMAHPQ9Y471 501 aa16.7■□□□□ 0.26
SMC4-209ENST00000468653 B4GALT1P15291 398 aa16.69■□□□□ 0.26
SMC4-209ENST00000468653 CFL1P23528 166 aaKnown RBP16.69■□□□□ 0.26
SMC4-209ENST00000468653 OR10A3P58181 314 aa16.69■□□□□ 0.26
SMC4-209ENST00000468653 GRB2P62993 217 aaKnown RBP16.69■□□□□ 0.26
SMC4-209ENST00000468653 ZNF704Q6ZNC4 412 aaPredicted RBP16.69■□□□□ 0.26
SMC4-209ENST00000468653 NR2C2APQ86WQ0 139 aa16.69■□□□□ 0.26
SMC4-209ENST00000468653 CROCCP3Q8IVE0 287 aa16.69■□□□□ 0.26
SMC4-209ENST00000468653 OR51A4Q8NGJ6 313 aa16.69■□□□□ 0.26
SMC4-209ENST00000468653 THRSPQ92748 146 aa16.69■□□□□ 0.26
SMC4-209ENST00000468653 SH3GL3Q99963 347 aa16.69■□□□□ 0.26
SMC4-209ENST00000468653 PLSCR2Q9NRY7 297 aa16.69■□□□□ 0.26
SMC4-209ENST00000468653 FAM206AQ9NX38 181 aa16.69■□□□□ 0.26
SMC4-209ENST00000468653 DCHS1Q96JQ0 3298 aa16.69■□□□□ 0.26
SMC4-209ENST00000468653 CST2P09228 141 aa16.69■□□□□ 0.26
SMC4-209ENST00000468653 PRKXP51817 358 aa16.69■□□□□ 0.26
SMC4-209ENST00000468653 IDNKQ5T6J7 187 aa16.69■□□□□ 0.26
SMC4-209ENST00000468653 RPUSD3Q6P087 351 aaKnown RBP16.69■□□□□ 0.26
SMC4-209ENST00000468653 C16orf87Q6PH81 154 aa16.69■□□□□ 0.26
SMC4-209ENST00000468653 NUFIP2Q7Z417 695 aaKnown RBP16.69■□□□□ 0.26
SMC4-209ENST00000468653 ORAI1Q96D31 301 aa16.69■□□□□ 0.26
SMC4-209ENST00000468653 FBXO17Q96EF6 278 aa16.69■□□□□ 0.26
SMC4-209ENST00000468653 ATF6BQ99941 703 aa16.69■□□□□ 0.26
SMC4-209ENST00000468653 SLITRK2Q9H156 845 aa16.69■□□□□ 0.26
SMC4-209ENST00000468653 GP6Q9HCN6 339 aa16.69■□□□□ 0.26
SMC4-209ENST00000468653 TCF7L1Q9HCS4 588 aa16.69■□□□□ 0.26
SMC4-209ENST00000468653 UPB1Q9UBR1 384 aa16.69■□□□□ 0.26
SMC4-209ENST00000468653 LHX6Q9UPM6 363 aa16.69■□□□□ 0.26
SMC4-209ENST00000468653 SLC5A6Q9Y289 635 aa16.69■□□□□ 0.26
SMC4-209ENST00000468653 CEP295Q9C0D2 2601 aa16.68■□□□□ 0.26
SMC4-209ENST00000468653 ZNF587BE7ETH6 402 aa16.68■□□□□ 0.26
SMC4-209ENST00000468653 PDCD5O14737 125 aa16.68■□□□□ 0.26
SMC4-209ENST00000468653 ZNHIT1O43257 154 aa16.68■□□□□ 0.26
SMC4-209ENST00000468653 DOK2O60496 412 aa16.68■□□□□ 0.26
SMC4-209ENST00000468653 RAF1P04049 648 aa16.68■□□□□ 0.26
SMC4-209ENST00000468653 TMPRSS3P57727 454 aa16.68■□□□□ 0.26
SMC4-209ENST00000468653 PSMA6P60900 246 aaKnown RBP16.68■□□□□ 0.26
SMC4-209ENST00000468653 HIST1H3AP68431 136 aa16.68■□□□□ 0.26
SMC4-209ENST00000468653 PLEKHN1Q494U1 663 aaPredicted RBP16.68■□□□□ 0.26
SMC4-209ENST00000468653 SPANXN2Q5MJ10 180 aa16.68■□□□□ 0.26
SMC4-209ENST00000468653 DDI2Q5TDH0 399 aa16.68■□□□□ 0.26
SMC4-209ENST00000468653 HIST2H3PS2Q5TEC6 136 aa16.68■□□□□ 0.26
SMC4-209ENST00000468653 MZT2AQ6P582 158 aa16.68■□□□□ 0.26
SMC4-209ENST00000468653 HIST2H3AQ71DI3 136 aa16.68■□□□□ 0.26
SMC4-209ENST00000468653 SYT9Q86SS6 491 aa16.68■□□□□ 0.26
SMC4-209ENST00000468653 UBE2J2Q8N2K1 259 aa16.68■□□□□ 0.26
SMC4-209ENST00000468653 SLC22A24Q8N4F4 322 aa16.68■□□□□ 0.26
SMC4-209ENST00000468653 OR5M9Q8NGP3 310 aa16.68■□□□□ 0.26
SMC4-209ENST00000468653 EXTL1Q92935 676 aa16.68■□□□□ 0.26
SMC4-209ENST00000468653 TMEM106AQ96A25 262 aa16.68■□□□□ 0.26
SMC4-209ENST00000468653 TRIB1Q96RU8 372 aa16.68■□□□□ 0.26
SMC4-209ENST00000468653 PBOV1Q9GZY1 135 aa16.68■□□□□ 0.26
SMC4-209ENST00000468653 ABCB9Q9NP78 766 aa16.68■□□□□ 0.26
SMC4-209ENST00000468653 DDX28Q9NUL7 540 aaKnown RBP16.68■□□□□ 0.26
SMC4-209ENST00000468653 COMMD3Q9UBI1 195 aa16.68■□□□□ 0.26
SMC4-209ENST00000468653 LOC400499M0QZD8 3231 aa16.68■□□□□ 0.26
SMC4-209ENST00000468653 ZFHX4Q86UP3 3567 aa16.67■□□□□ 0.26
SMC4-209ENST00000468653 CRYABP02511 175 aaKnown RBP16.67■□□□□ 0.26
SMC4-209ENST00000468653 UBCP0CG48 685 aaKnown RBP16.67■□□□□ 0.26
SMC4-209ENST00000468653 TNFSF8P32971 234 aa16.67■□□□□ 0.26
SMC4-209ENST00000468653 UCNP55089 124 aa16.67■□□□□ 0.26
SMC4-209ENST00000468653 GALK2Q01415 458 aa16.67■□□□□ 0.26
SMC4-209ENST00000468653 ZNF45Q02386 682 aa16.67■□□□□ 0.26
SMC4-209ENST00000468653 CCDC92Q53HC0 331 aaPredicted RBP16.67■□□□□ 0.26
SMC4-209ENST00000468653 ELFN2Q5R3F8 820 aa16.67■□□□□ 0.26
SMC4-209ENST00000468653 TMEM244Q5VVB8 128 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms