RNA–Protein interactions for RNA: ENST00000467318.5

DDX56-208, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,665 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-208ENST00000467318 SPI1P17947 270 aa12.96□□□□□ -0.34
DDX56-208ENST00000467318 NPR2P20594 1047 aa12.96□□□□□ -0.34
DDX56-208ENST00000467318 CD79BP40259 229 aa12.96□□□□□ -0.34
DDX56-208ENST00000467318 EIF2B2P49770 351 aaKnown RBP12.96□□□□□ -0.34
DDX56-208ENST00000467318 CDSNQ15517 529 aa12.96□□□□□ -0.34
DDX56-208ENST00000467318 SNX29P2Q8IUI4 249 aa12.96□□□□□ -0.34
DDX56-208ENST00000467318 GLB1L2Q8IW92 636 aa12.96□□□□□ -0.34
DDX56-208ENST00000467318 PHC2Q8IXK0 858 aa12.96□□□□□ -0.34
DDX56-208ENST00000467318 C1orf162Q8NEQ5 155 aaPredicted RBP12.96□□□□□ -0.34
DDX56-208ENST00000467318 NSMAFQ92636 917 aa12.96□□□□□ -0.34
DDX56-208ENST00000467318 ZNF837Q96EG3 531 aaPredicted RBP12.96□□□□□ -0.34
DDX56-208ENST00000467318 RNFT2Q96EX2 444 aa12.96□□□□□ -0.34
DDX56-208ENST00000467318 FOXB1Q99853 325 aa12.96□□□□□ -0.34
DDX56-208ENST00000467318 RERGLQ9H628 205 aa12.96□□□□□ -0.34
DDX56-208ENST00000467318 IGLV1-36A0A0B4J1U3 117 aa12.95□□□□□ -0.34
DDX56-208ENST00000467318 CIB4A0PJX0 185 aa12.95□□□□□ -0.34
DDX56-208ENST00000467318 FAM90A27PA6NNH2 459 aa12.95□□□□□ -0.34
DDX56-208ENST00000467318 GAAP10253 952 aa12.95□□□□□ -0.34
DDX56-208ENST00000467318 TNFSF8P32971 234 aa12.95□□□□□ -0.34
DDX56-208ENST00000467318 RPS19P39019 145 aaKnown RBP12.95□□□□□ -0.34
DDX56-208ENST00000467318 MTNR1AP48039 350 aa12.95□□□□□ -0.34
DDX56-208ENST00000467318 MRPS34P82930 218 aaKnown RBP12.95□□□□□ -0.34
DDX56-208ENST00000467318 ETFDHQ16134 617 aa12.95□□□□□ -0.34
DDX56-208ENST00000467318 SLC35D3Q5M8T2 416 aa12.95□□□□□ -0.34
DDX56-208ENST00000467318 TMPRSS11AQ6ZMR5 421 aa12.95□□□□□ -0.34
DDX56-208ENST00000467318 STAC2Q6ZMT1 411 aa12.95□□□□□ -0.34
DDX56-208ENST00000467318 CXorf67Q86X51 503 aaPredicted RBP12.95□□□□□ -0.34
DDX56-208ENST00000467318 GID4Q8IVV7 300 aa12.95□□□□□ -0.34
DDX56-208ENST00000467318 ZNF433Q8N7K0 673 aaPredicted RBP12.95□□□□□ -0.34
DDX56-208ENST00000467318 AP3S1Q92572 193 aa12.95□□□□□ -0.34
DDX56-208ENST00000467318 UFD1Q92890 307 aa12.95□□□□□ -0.34
DDX56-208ENST00000467318 RNASE6Q93091 150 aaKnown RBP12.95□□□□□ -0.34
DDX56-208ENST00000467318 KISS1RQ969F8 398 aaPredicted RBP12.95□□□□□ -0.34
DDX56-208ENST00000467318 KCNS3Q9BQ31 491 aa12.95□□□□□ -0.34
DDX56-208ENST00000467318 OR51V1Q9H2C8 321 aa12.95□□□□□ -0.34
DDX56-208ENST00000467318 NELFAQ9H3P2 528 aa12.95□□□□□ -0.34
DDX56-208ENST00000467318 COA3Q9Y2R0 106 aaPredicted RBP12.95□□□□□ -0.34
DDX56-208ENST00000467318 LYZL6O75951 148 aa12.94□□□□□ -0.34
DDX56-208ENST00000467318 UBR5O95071 2799 aaPredicted RBP12.94□□□□□ -0.34
DDX56-208ENST00000467318 RNF224P0DH78 156 aa12.94□□□□□ -0.34
DDX56-208ENST00000467318 HOXB1P14653 301 aaPredicted RBP12.94□□□□□ -0.34
DDX56-208ENST00000467318 LAP3P28838 519 aa12.94□□□□□ -0.34
DDX56-208ENST00000467318 FOXG1P55316 489 aaPredicted RBP12.94□□□□□ -0.34
DDX56-208ENST00000467318 ARF1P84077 181 aaKnown RBP12.94□□□□□ -0.34
DDX56-208ENST00000467318 HSF2Q03933 536 aa12.94□□□□□ -0.34
DDX56-208ENST00000467318 FAM27E3Q08E93 113 aa12.94□□□□□ -0.34
DDX56-208ENST00000467318 C1QTNF12Q5T7M4 302 aa12.94□□□□□ -0.34
DDX56-208ENST00000467318 C9orf135Q5VTT2 229 aa12.94□□□□□ -0.34
DDX56-208ENST00000467318 AADACL4Q5VUY2 407 aa12.94□□□□□ -0.34
DDX56-208ENST00000467318 ANKRD16Q6P6B7 361 aa12.94□□□□□ -0.34
DDX56-208ENST00000467318 FOXL2NBQ6ZUU3 175 aa12.94□□□□□ -0.34
DDX56-208ENST00000467318 HPS1Q92902 700 aa12.94□□□□□ -0.34
DDX56-208ENST00000467318 KCTD7Q96MP8 289 aa12.94□□□□□ -0.34
DDX56-208ENST00000467318 HCAR1Q9BXC0 346 aa12.94□□□□□ -0.34
DDX56-208ENST00000467318 OR10A4Q9H209 315 aa12.94□□□□□ -0.34
DDX56-208ENST00000467318 MED20Q9H944 212 aa12.94□□□□□ -0.34
DDX56-208ENST00000467318 SEC61A2Q9H9S3 476 aa12.94□□□□□ -0.34
DDX56-208ENST00000467318 TMEM38BQ9NVV0 291 aa12.94□□□□□ -0.34
DDX56-208ENST00000467318 NPAP1Q9NZP6 1156 aa12.94□□□□□ -0.34
DDX56-208ENST00000467318 GRIP1Q9Y3R0 1128 aa12.94□□□□□ -0.34
DDX56-208ENST00000467318 CMAHPQ9Y471 501 aa12.94□□□□□ -0.34
DDX56-208ENST00000467318 SLC22A31A6NKX4 558 aa12.93□□□□□ -0.34
DDX56-208ENST00000467318 C16orf97H3BN30 126 aa12.93□□□□□ -0.34
DDX56-208ENST00000467318 CTDSP2O14595 271 aa12.93□□□□□ -0.34
DDX56-208ENST00000467318 GLCEO94923 617 aa12.93□□□□□ -0.34
DDX56-208ENST00000467318 FARS2O95363 451 aaKnown RBP12.93□□□□□ -0.34
DDX56-208ENST00000467318 HRGP04196 525 aa12.93□□□□□ -0.34
DDX56-208ENST00000467318 GYPBP06028 91 aa12.93□□□□□ -0.34
DDX56-208ENST00000467318 OR8G3PP0DMU2 310 aa12.93□□□□□ -0.34
DDX56-208ENST00000467318 CLUP10909 449 aa12.93□□□□□ -0.34
DDX56-208ENST00000467318 ETV1P50549 477 aa12.93□□□□□ -0.34
DDX56-208ENST00000467318 SRSF1Q07955 248 aaKnown RBP eCLIP12.93□□□□□ -0.34
DDX56-208ENST00000467318 ACSM1Q08AH1 577 aa12.93□□□□□ -0.34
DDX56-208ENST00000467318 GABRA6Q16445 453 aa12.93□□□□□ -0.34
DDX56-208ENST00000467318 KLHL12Q53G59 568 aa12.93□□□□□ -0.34
DDX56-208ENST00000467318 LIPKQ5VXJ0 399 aa12.93□□□□□ -0.34
DDX56-208ENST00000467318 ZNF813Q6ZN06 617 aa12.93□□□□□ -0.34
DDX56-208ENST00000467318 BHLHA15Q7RTS1 189 aaPredicted RBP12.93□□□□□ -0.34
DDX56-208ENST00000467318 CCDC36Q8IYA8 594 aa12.93□□□□□ -0.34
DDX56-208ENST00000467318 C17orf78Q8N4C9 275 aa12.93□□□□□ -0.34
DDX56-208ENST00000467318 STEAP2Q8NFT2 490 aa12.93□□□□□ -0.34
DDX56-208ENST00000467318 OR1K1Q8NGR3 316 aa12.93□□□□□ -0.34
DDX56-208ENST00000467318 SSC4DQ8WTU2 575 aa12.93□□□□□ -0.34
DDX56-208ENST00000467318 SLC25A46Q96AG3 418 aa12.93□□□□□ -0.34
DDX56-208ENST00000467318 TEAD3Q99594 435 aa12.93□□□□□ -0.34
DDX56-208ENST00000467318 JAM3Q9BX67 310 aa12.93□□□□□ -0.34
DDX56-208ENST00000467318 SNTG1Q9NSN8 517 aa12.93□□□□□ -0.34
DDX56-208ENST00000467318 TXNL4BQ9NX01 149 aaKnown RBP12.93□□□□□ -0.34
DDX56-208ENST00000467318 EXOGQ9Y2C4 368 aaKnown RBP12.93□□□□□ -0.34
DDX56-208ENST00000467318 A0A1W2PPL8 197 aa12.93□□□□□ -0.34
DDX56-208ENST00000467318 CLEC18AA5D8T8 446 aa12.93□□□□□ -0.34
DDX56-208ENST00000467318 NKX2-6A6NCS4 301 aa12.93□□□□□ -0.34
DDX56-208ENST00000467318 RAD51DO75771 328 aa12.93□□□□□ -0.34
DDX56-208ENST00000467318 HLA-DQA2P01906 255 aa12.93□□□□□ -0.34
DDX56-208ENST00000467318 SLC2A5P22732 501 aa12.93□□□□□ -0.34
DDX56-208ENST00000467318 IL32P24001 234 aa12.93□□□□□ -0.34
DDX56-208ENST00000467318 FGF9P31371 208 aaPredicted RBP12.93□□□□□ -0.34
DDX56-208ENST00000467318 PYCR1P32322 319 aa12.93□□□□□ -0.34
DDX56-208ENST00000467318 RPS7P62081 194 aaKnown RBP12.93□□□□□ -0.34
DDX56-208ENST00000467318 TFF3Q07654 80 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms