RNA–Protein interactions for RNA: ENST00000466285.1

COL6A1-203, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 500 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-203ENST00000466285 ZNF570Q96NI8 536 aa17.3■□□□□ 0.36
COL6A1-203ENST00000466285 FNDC11Q9BVV2 318 aa17.3■□□□□ 0.36
COL6A1-203ENST00000466285 SYT4Q9H2B2 425 aa17.3■□□□□ 0.36
COL6A1-203ENST00000466285 ASH2LQ9UBL3 628 aa17.3■□□□□ 0.36
COL6A1-203ENST00000466285 INSIG2Q9Y5U4 225 aa17.3■□□□□ 0.36
COL6A1-203ENST00000466285 MDFIC2A0A1B0GVS7 189 aa17.29■□□□□ 0.36
COL6A1-203ENST00000466285 CEACAM18A8MTB9 384 aa17.29■□□□□ 0.36
COL6A1-203ENST00000466285 A8MXK9 166 aa17.29■□□□□ 0.36
COL6A1-203ENST00000466285 TMPRSS2O15393 492 aa17.29■□□□□ 0.36
COL6A1-203ENST00000466285 FOXH1O75593 365 aa17.29■□□□□ 0.36
COL6A1-203ENST00000466285 NPPAP01160 153 aa17.29■□□□□ 0.36
COL6A1-203ENST00000466285 CD14P08571 375 aa17.29■□□□□ 0.36
COL6A1-203ENST00000466285 RPL4P36578 427 aaKnown RBP17.29■□□□□ 0.36
COL6A1-203ENST00000466285 LIPEQ05469 1076 aa17.29■□□□□ 0.36
COL6A1-203ENST00000466285 KRR1Q13601 381 aaKnown RBP17.29■□□□□ 0.36
COL6A1-203ENST00000466285 MEP1BQ16820 701 aa17.29■□□□□ 0.36
COL6A1-203ENST00000466285 ARMCX4Q5H9R4 360 aa17.29■□□□□ 0.36
COL6A1-203ENST00000466285 FAM201AQ5SY85 155 aa17.29■□□□□ 0.36
COL6A1-203ENST00000466285 DOK3Q7L591 496 aa17.29■□□□□ 0.36
COL6A1-203ENST00000466285 NPEPL1Q8NDH3 523 aa17.29■□□□□ 0.36
COL6A1-203ENST00000466285 ZMYND19Q96E35 227 aaPredicted RBP17.29■□□□□ 0.36
COL6A1-203ENST00000466285 DIRC2Q96SL1 478 aa17.29■□□□□ 0.36
COL6A1-203ENST00000466285 RERGLQ9H628 205 aa17.29■□□□□ 0.36
COL6A1-203ENST00000466285 TBCCD1Q9NVR7 557 aa17.29■□□□□ 0.36
COL6A1-203ENST00000466285 PTTG3PQ9NZH4 202 aa17.29■□□□□ 0.36
COL6A1-203ENST00000466285 COA3Q9Y2R0 106 aaPredicted RBP17.29■□□□□ 0.36
COL6A1-203ENST00000466285 PPIAL4EA0A075B759 164 aa17.28■□□□□ 0.36
COL6A1-203ENST00000466285 PPIAL4CA0A0B4J2A2 164 aa17.28■□□□□ 0.36
COL6A1-203ENST00000466285 PRSS37A4D1T9 235 aa17.28■□□□□ 0.36
COL6A1-203ENST00000466285 PPIAL4DF5H284 164 aa17.28■□□□□ 0.36
COL6A1-203ENST00000466285 DCTN6O00399 190 aa17.28■□□□□ 0.36
COL6A1-203ENST00000466285 CXCR6O00574 342 aa17.28■□□□□ 0.36
COL6A1-203ENST00000466285 RER1O15258 196 aa17.28■□□□□ 0.36
COL6A1-203ENST00000466285 CYB5R3P00387 301 aaPredicted RBP17.28■□□□□ 0.36
COL6A1-203ENST00000466285 VIMP08670 466 aaKnown RBP17.28■□□□□ 0.36
COL6A1-203ENST00000466285 PPIAL4FP0DN26 164 aa17.28■□□□□ 0.36
COL6A1-203ENST00000466285 COX5BP10606 129 aa17.28■□□□□ 0.36
COL6A1-203ENST00000466285 NCK1P16333 377 aa17.28■□□□□ 0.36
COL6A1-203ENST00000466285 GSTM3P21266 225 aa17.28■□□□□ 0.36
COL6A1-203ENST00000466285 ANOS1P23352 680 aa17.28■□□□□ 0.36
COL6A1-203ENST00000466285 LIPAP38571 399 aa17.28■□□□□ 0.36
COL6A1-203ENST00000466285 PAX2Q02962 417 aa17.28■□□□□ 0.36
COL6A1-203ENST00000466285 SCRN3Q0VDG4 424 aa17.28■□□□□ 0.36
COL6A1-203ENST00000466285 TMEM155Q4W5P6 130 aa17.28■□□□□ 0.36
COL6A1-203ENST00000466285 ZMAT1Q5H9K5 638 aa17.28■□□□□ 0.36
COL6A1-203ENST00000466285 TMPRSS11FQ6ZWK6 438 aa17.28■□□□□ 0.36
COL6A1-203ENST00000466285 CBLL1Q75N03 491 aa17.28■□□□□ 0.36
COL6A1-203ENST00000466285 ZSCAN2Q7Z7L9 614 aaPredicted RBP17.28■□□□□ 0.36
COL6A1-203ENST00000466285 SYT9Q86SS6 491 aa17.28■□□□□ 0.36
COL6A1-203ENST00000466285 LRRC28Q86X40 367 aaPredicted RBP17.28■□□□□ 0.36
COL6A1-203ENST00000466285 FAM86B1Q8N7N1 296 aa17.28■□□□□ 0.36
COL6A1-203ENST00000466285 FAM156AQ8NDB6 213 aa17.28■□□□□ 0.36
COL6A1-203ENST00000466285 FNDC8Q8TC99 324 aa17.28■□□□□ 0.36
COL6A1-203ENST00000466285 SLC7A13Q8TCU3 470 aa17.28■□□□□ 0.36
COL6A1-203ENST00000466285 SAMD8Q96LT4 415 aa17.28■□□□□ 0.36
COL6A1-203ENST00000466285 TSSK2Q96PF2 358 aa17.28■□□□□ 0.36
COL6A1-203ENST00000466285 GCM1Q9NP62 436 aa17.28■□□□□ 0.36
COL6A1-203ENST00000466285 PLEK2Q9NYT0 353 aa17.28■□□□□ 0.36
COL6A1-203ENST00000466285 PPP1R3CQ9UQK1 317 aa17.28■□□□□ 0.36
COL6A1-203ENST00000466285 POLR3KQ9Y2Y1 108 aaPredicted RBP17.28■□□□□ 0.36
COL6A1-203ENST00000466285 AUP1Q9Y679 476 aa17.28■□□□□ 0.36
COL6A1-203ENST00000466285 CAPN7Q9Y6W3 813 aa17.28■□□□□ 0.36
COL6A1-203ENST00000466285 DOCK11Q5JSL3 2073 aa17.28■□□□□ 0.36
COL6A1-203ENST00000466285 TMEM178BH3BS89 294 aa17.27■□□□□ 0.36
COL6A1-203ENST00000466285 SOCS2O14508 198 aa17.27■□□□□ 0.36
COL6A1-203ENST00000466285 MLNRO43193 412 aa17.27■□□□□ 0.36
COL6A1-203ENST00000466285 SERPINA1P01009 418 aa17.27■□□□□ 0.36
COL6A1-203ENST00000466285 HKR1P10072 659 aa17.27■□□□□ 0.36
COL6A1-203ENST00000466285 TROVE2P10155 538 aaKnown RBP eCLIP17.27■□□□□ 0.36
COL6A1-203ENST00000466285 CD80P33681 288 aa17.27■□□□□ 0.36
COL6A1-203ENST00000466285 GSK3BP49841 420 aa17.27■□□□□ 0.36
COL6A1-203ENST00000466285 SLC7A2P52569 658 aa17.27■□□□□ 0.36
COL6A1-203ENST00000466285 AQP6Q13520 282 aa17.27■□□□□ 0.36
COL6A1-203ENST00000466285 SEC23BQ15437 767 aa17.27■□□□□ 0.36
COL6A1-203ENST00000466285 MAPRE2Q15555 327 aa17.27■□□□□ 0.36
COL6A1-203ENST00000466285 ZBED5Q49AG3 693 aa17.27■□□□□ 0.36
COL6A1-203ENST00000466285 IFI44LQ53G44 452 aa17.27■□□□□ 0.36
COL6A1-203ENST00000466285 OR2T2Q6IF00 324 aa17.27■□□□□ 0.36
COL6A1-203ENST00000466285 UNQ6126/PRO20091Q6UXV3 157 aa17.27■□□□□ 0.36
COL6A1-203ENST00000466285 SPICQ8N5J4 248 aa17.27■□□□□ 0.36
COL6A1-203ENST00000466285 SGMS2Q8NHU3 365 aa17.27■□□□□ 0.36
COL6A1-203ENST00000466285 POP5Q969H6 163 aaKnown RBP17.27■□□□□ 0.36
COL6A1-203ENST00000466285 HAVCR1Q96D42 359 aa17.27■□□□□ 0.36
COL6A1-203ENST00000466285 GPA33Q99795 319 aa17.27■□□□□ 0.36
COL6A1-203ENST00000466285 WDR76Q9H967 626 aa17.27■□□□□ 0.36
COL6A1-203ENST00000466285 GRHPRQ9UBQ7 328 aa17.27■□□□□ 0.36
COL6A1-203ENST00000466285 NUP50Q9UKX7 468 aa17.27■□□□□ 0.36
COL6A1-203ENST00000466285 SIGLEC7Q9Y286 467 aa17.27■□□□□ 0.36
COL6A1-203ENST00000466285 SLC16A7O60669 478 aa17.26■□□□□ 0.35
COL6A1-203ENST00000466285 DIRAS1O95057 198 aa17.26■□□□□ 0.35
COL6A1-203ENST00000466285 C8orf82Q6P1X6 216 aaPredicted RBP17.26■□□□□ 0.35
COL6A1-203ENST00000466285 CORO6Q6QEF8 472 aa17.26■□□□□ 0.35
COL6A1-203ENST00000466285 KLHL36Q8N4N3 616 aa17.26■□□□□ 0.35
COL6A1-203ENST00000466285 PCYOX1LQ8NBM8 494 aa17.26■□□□□ 0.35
COL6A1-203ENST00000466285 OR1F12Q8NHA8 337 aa17.26■□□□□ 0.35
COL6A1-203ENST00000466285 DACT3Q96B18 629 aaPredicted RBP17.26■□□□□ 0.35
COL6A1-203ENST00000466285 ZNF747Q9BV97 191 aa17.26■□□□□ 0.35
COL6A1-203ENST00000466285 DDX28Q9NUL7 540 aaKnown RBP17.26■□□□□ 0.35
COL6A1-203ENST00000466285 GID8Q9NWU2 228 aa17.26■□□□□ 0.35
COL6A1-203ENST00000466285 IL19Q9UHD0 177 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms