RNA–Protein interactions for RNA: ENST00000466222.6

CAPN3-209, Transcript of calpain 3, humanhuman

TSL 2

Gene CAPN3, Length 1,934 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-209ENST00000466222 TXNIPQ9H3M7 391 aa16.53■□□□□ 0.24
CAPN3-209ENST00000466222 NPIPA5E9PKD4 350 aa16.53■□□□□ 0.24
CAPN3-209ENST00000466222 GSTZ1O43708 216 aaPredicted RBP16.53■□□□□ 0.24
CAPN3-209ENST00000466222 LANCL1O43813 399 aa16.53■□□□□ 0.24
CAPN3-209ENST00000466222 ZNF780AO75290 641 aaPredicted RBP16.53■□□□□ 0.24
CAPN3-209ENST00000466222 APEHP13798 732 aaKnown RBP16.53■□□□□ 0.24
CAPN3-209ENST00000466222 ZNF708P17019 499 aa16.53■□□□□ 0.24
CAPN3-209ENST00000466222 RAC3P60763 192 aa16.53■□□□□ 0.24
CAPN3-209ENST00000466222 CSNK2A1P68400 391 aaPredicted RBP16.53■□□□□ 0.24
CAPN3-209ENST00000466222 SIRPAP78324 504 aa16.53■□□□□ 0.24
CAPN3-209ENST00000466222 OTPQ5XKR4 325 aa16.53■□□□□ 0.24
CAPN3-209ENST00000466222 SLC35D2Q76EJ3 337 aa16.53■□□□□ 0.24
CAPN3-209ENST00000466222 PM20D2Q8IYS1 436 aa16.53■□□□□ 0.24
CAPN3-209ENST00000466222 ZNF519Q8TB69 540 aa16.53■□□□□ 0.24
CAPN3-209ENST00000466222 PELI1Q96FA3 418 aa16.53■□□□□ 0.24
CAPN3-209ENST00000466222 ABHD1Q96SE0 405 aa16.53■□□□□ 0.24
CAPN3-209ENST00000466222 SYT4Q9H2B2 425 aa16.53■□□□□ 0.24
CAPN3-209ENST00000466222 NPIPA1Q9UND3 350 aa16.53■□□□□ 0.24
CAPN3-209ENST00000466222 CAMK2AQ9UQM7 478 aa16.53■□□□□ 0.24
CAPN3-209ENST00000466222 A0A1W2PRG6 482 aa16.52■□□□□ 0.23
CAPN3-209ENST00000466222 ZNF879B4DU55 563 aa16.52■□□□□ 0.23
CAPN3-209ENST00000466222 TFP02787 698 aa16.52■□□□□ 0.23
CAPN3-209ENST00000466222 EPXP11678 715 aa16.52■□□□□ 0.23
CAPN3-209ENST00000466222 BTCP35070 178 aa16.52■□□□□ 0.23
CAPN3-209ENST00000466222 GNG2P59768 71 aa16.52■□□□□ 0.23
CAPN3-209ENST00000466222 SLC25A35Q3KQZ1 300 aa16.52■□□□□ 0.23
CAPN3-209ENST00000466222 UNQ9370/PRO34162Q6UXP9 181 aa16.52■□□□□ 0.23
CAPN3-209ENST00000466222 SSX6Q7RTT6 188 aa16.52■□□□□ 0.23
CAPN3-209ENST00000466222 JAZF1Q86VZ6 243 aa16.52■□□□□ 0.23
CAPN3-209ENST00000466222 TOMM5Q8N4H5 51 aa16.52■□□□□ 0.23
CAPN3-209ENST00000466222 HAVCR2Q8TDQ0 301 aa16.52■□□□□ 0.23
CAPN3-209ENST00000466222 OR2M2Q96R28 347 aa16.52■□□□□ 0.23
CAPN3-209ENST00000466222 MED28Q9H204 178 aa16.52■□□□□ 0.23
CAPN3-209ENST00000466222 SRA1Q9HD15 236 aaKnown RBP16.52■□□□□ 0.23
CAPN3-209ENST00000466222 EMC7Q9NPA0 242 aa16.52■□□□□ 0.23
CAPN3-209ENST00000466222 SPATA2Q9UM82 520 aa16.52■□□□□ 0.23
CAPN3-209ENST00000466222 A0A1W2PNV4 684 aa16.51■□□□□ 0.23
CAPN3-209ENST00000466222 PDCD5O14737 125 aa16.51■□□□□ 0.23
CAPN3-209ENST00000466222 TRAF3IP2O43734 574 aaPredicted RBP16.51■□□□□ 0.23
CAPN3-209ENST00000466222 GPANK1O95872 356 aa16.51■□□□□ 0.23
CAPN3-209ENST00000466222 TP53I3Q53FA7 332 aa16.51■□□□□ 0.23
CAPN3-209ENST00000466222 RPTNQ6XPR3 784 aa16.51■□□□□ 0.23
CAPN3-209ENST00000466222 SNX33Q8WV41 574 aa16.51■□□□□ 0.23
CAPN3-209ENST00000466222 YIPF5Q969M3 257 aa16.51■□□□□ 0.23
CAPN3-209ENST00000466222 ZMYND19Q96E35 227 aaPredicted RBP16.51■□□□□ 0.23
CAPN3-209ENST00000466222 FOXN4Q96NZ1 517 aa16.51■□□□□ 0.23
CAPN3-209ENST00000466222 NDEL1Q9GZM8 345 aa16.51■□□□□ 0.23
CAPN3-209ENST00000466222 TNRC6AQ8NDV7 1962 aaKnown RBP16.51■□□□□ 0.23
CAPN3-209ENST00000466222 STOMP27105 288 aa16.51■□□□□ 0.23
CAPN3-209ENST00000466222 BIDP55957 195 aa16.51■□□□□ 0.23
CAPN3-209ENST00000466222 DYRK1AQ13627 763 aa16.51■□□□□ 0.23
CAPN3-209ENST00000466222 ETFDHQ16134 617 aa16.51■□□□□ 0.23
CAPN3-209ENST00000466222 SLC36A2Q495M3 483 aa16.51■□□□□ 0.23
CAPN3-209ENST00000466222 CD276Q5ZPR3 534 aa16.51■□□□□ 0.23
CAPN3-209ENST00000466222 GPR139Q6DWJ6 353 aa16.51■□□□□ 0.23
CAPN3-209ENST00000466222 SIAH3Q8IW03 269 aa16.51■□□□□ 0.23
CAPN3-209ENST00000466222 UEVLDQ8IX04 471 aa16.51■□□□□ 0.23
CAPN3-209ENST00000466222 OR6V1Q8N148 313 aa16.51■□□□□ 0.23
CAPN3-209ENST00000466222 DEDD2Q8WXF8 326 aa16.51■□□□□ 0.23
CAPN3-209ENST00000466222 ASB10Q8WXI3 467 aa16.51■□□□□ 0.23
CAPN3-209ENST00000466222 ZNF385AQ96PM9 386 aaKnown RBP16.51■□□□□ 0.23
CAPN3-209ENST00000466222 MRI1Q9BV20 369 aa16.51■□□□□ 0.23
CAPN3-209ENST00000466222 NMNAT2Q9BZQ4 307 aa16.51■□□□□ 0.23
CAPN3-209ENST00000466222 FANCFQ9NPI8 374 aa16.51■□□□□ 0.23
CAPN3-209ENST00000466222 ING4Q9UNL4 249 aa16.51■□□□□ 0.23
CAPN3-209ENST00000466222 SMG1Q96Q15 3661 aaKnown RBP16.5■□□□□ 0.23
CAPN3-209ENST00000466222 A0A0A6YYJ9 748 aa16.5■□□□□ 0.23
CAPN3-209ENST00000466222 LINC01387J3KSC0 135 aa16.5■□□□□ 0.23
CAPN3-209ENST00000466222 EIF1BO60739 113 aaKnown RBP16.5■□□□□ 0.23
CAPN3-209ENST00000466222 IGHMP01871 453 aa16.5■□□□□ 0.23
CAPN3-209ENST00000466222 ZNF43P17038 809 aa16.5■□□□□ 0.23
CAPN3-209ENST00000466222 SPI1P17947 270 aa16.5■□□□□ 0.23
CAPN3-209ENST00000466222 NTF4P34130 210 aa16.5■□□□□ 0.23
CAPN3-209ENST00000466222 GALK2Q01415 458 aa16.5■□□□□ 0.23
CAPN3-209ENST00000466222 EMC4Q5J8M3 183 aa16.5■□□□□ 0.23
CAPN3-209ENST00000466222 UBE2NLQ5JXB2 153 aa16.5■□□□□ 0.23
CAPN3-209ENST00000466222 C1QTNF12Q5T7M4 302 aa16.5■□□□□ 0.23
CAPN3-209ENST00000466222 EEF1A1P5Q5VTE0 462 aa16.5■□□□□ 0.23
CAPN3-209ENST00000466222 CARD17Q5XLA6 110 aa16.5■□□□□ 0.23
CAPN3-209ENST00000466222 ADPRHL1Q8NDY3 354 aa16.5■□□□□ 0.23
CAPN3-209ENST00000466222 RPS4Y2Q8TD47 263 aa16.5■□□□□ 0.23
CAPN3-209ENST00000466222 ABHD3Q8WU67 409 aa16.5■□□□□ 0.23
CAPN3-209ENST00000466222 OXGR1Q96P68 337 aa16.5■□□□□ 0.23
CAPN3-209ENST00000466222 ACTR6Q9GZN1 396 aa16.5■□□□□ 0.23
CAPN3-209ENST00000466222 GHITMQ9H3K2 345 aa16.5■□□□□ 0.23
CAPN3-209ENST00000466222 DIABLOQ9NR28 239 aa16.5■□□□□ 0.23
CAPN3-209ENST00000466222 EMC3Q9P0I2 261 aa16.5■□□□□ 0.23
CAPN3-209ENST00000466222 MPDZO75970 2070 aa16.49■□□□□ 0.23
CAPN3-209ENST00000466222 IGKV1D-43A0A0B4J1Z2 117 aa16.49■□□□□ 0.23
CAPN3-209ENST00000466222 XKRYO14609 159 aa16.49■□□□□ 0.23
CAPN3-209ENST00000466222 ATF1P18846 271 aa16.49■□□□□ 0.23
CAPN3-209ENST00000466222 EDNRAP25101 427 aa16.49■□□□□ 0.23
CAPN3-209ENST00000466222 FMODQ06828 376 aa16.49■□□□□ 0.23
CAPN3-209ENST00000466222 RIPPLY1Q0D2K3 151 aa16.49■□□□□ 0.23
CAPN3-209ENST00000466222 CAMK2DQ13557 499 aa16.49■□□□□ 0.23
CAPN3-209ENST00000466222 SLC17A1Q14916 467 aa16.49■□□□□ 0.23
CAPN3-209ENST00000466222 ZNF239Q16600 458 aaKnown RBP16.49■□□□□ 0.23
CAPN3-209ENST00000466222 CEP78Q5JTW2 689 aa16.49■□□□□ 0.23
CAPN3-209ENST00000466222 ZNF782Q6ZMW2 699 aaPredicted RBP16.49■□□□□ 0.23
CAPN3-209ENST00000466222 KRT74Q7RTS7 529 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms