RNA–Protein interactions for RNA: ENST00000465860.5

EXOSC3-204, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-204ENST00000465860 UGT2A1Q9Y4X1 527 aa4.14□□□□□ -1.75
EXOSC3-204ENST00000465860 MXRA5Q9NR99 2828 aa4.14□□□□□ -1.75
EXOSC3-204ENST00000465860 NAV3Q8IVL0 2385 aa4.13□□□□□ -1.75
EXOSC3-204ENST00000465860 ARPC4-TTLL3A0A0A6YYG9 625 aa4.13□□□□□ -1.75
EXOSC3-204ENST00000465860 IGHV2OR16-5A0A0B4J2B6 119 aa4.13□□□□□ -1.75
EXOSC3-204ENST00000465860 TMEM129A0AVI4 362 aa4.13□□□□□ -1.75
EXOSC3-204ENST00000465860 ZNF99A8MXY4 864 aaPredicted RBP4.13□□□□□ -1.75
EXOSC3-204ENST00000465860 SMPD2O60906 423 aa4.13□□□□□ -1.75
EXOSC3-204ENST00000465860 PTP4A3O75365 173 aa4.13□□□□□ -1.75
EXOSC3-204ENST00000465860 TRMUO75648 421 aaKnown RBP4.13□□□□□ -1.75
EXOSC3-204ENST00000465860 DCTN3O75935 186 aa4.13□□□□□ -1.75
EXOSC3-204ENST00000465860 KRT33AO76009 404 aa4.13□□□□□ -1.75
EXOSC3-204ENST00000465860 IGF2P01344 180 aa4.13□□□□□ -1.75
EXOSC3-204ENST00000465860 IFNA14P01570 189 aa4.13□□□□□ -1.75
EXOSC3-204ENST00000465860 IGKV3-15P01624 115 aa4.13□□□□□ -1.75
EXOSC3-204ENST00000465860 IGLV1-44P01699 117 aa4.13□□□□□ -1.75
EXOSC3-204ENST00000465860 IGHV4-39P01824 125 aa4.13□□□□□ -1.75
EXOSC3-204ENST00000465860 IFNW1P05000 195 aa4.13□□□□□ -1.75
EXOSC3-204ENST00000465860 GRPP07492 148 aa4.13□□□□□ -1.75
EXOSC3-204ENST00000465860 IGFBP1P08833 259 aaPredicted RBP4.13□□□□□ -1.75
EXOSC3-204ENST00000465860 QDPRP09417 244 aa4.13□□□□□ -1.75
EXOSC3-204ENST00000465860 CCL2P13500 99 aa4.13□□□□□ -1.75
EXOSC3-204ENST00000465860 CD99P14209 185 aa4.13□□□□□ -1.75
EXOSC3-204ENST00000465860 ZNF14P17017 642 aaPredicted RBP4.13□□□□□ -1.75
EXOSC3-204ENST00000465860 PTAFRP25105 342 aa4.13□□□□□ -1.75
EXOSC3-204ENST00000465860 CDAP32320 146 aa4.13□□□□□ -1.75
EXOSC3-204ENST00000465860 ACVR1BP36896 505 aa4.13□□□□□ -1.75
EXOSC3-204ENST00000465860 RBMXP38159 391 aaKnown RBP4.13□□□□□ -1.75
EXOSC3-204ENST00000465860 RBM34P42696 430 aaKnown RBP4.13□□□□□ -1.75
EXOSC3-204ENST00000465860 CSNK1A1P48729 337 aa4.13□□□□□ -1.75
EXOSC3-204ENST00000465860 IDH3GP51553 393 aaPredicted RBP4.13□□□□□ -1.75
EXOSC3-204ENST00000465860 PRKCDQ05655 676 aa4.13□□□□□ -1.75
EXOSC3-204ENST00000465860 ST3GAL3Q11203 375 aa4.13□□□□□ -1.75
EXOSC3-204ENST00000465860 PPP1R8Q12972 351 aaKnown RBP4.13□□□□□ -1.75
EXOSC3-204ENST00000465860 KRT72Q14CN4 511 aa4.13□□□□□ -1.75
EXOSC3-204ENST00000465860 HMBOX1Q6NT76 420 aa4.13□□□□□ -1.75
EXOSC3-204ENST00000465860 SLC22A25Q6T423 547 aa4.13□□□□□ -1.75
EXOSC3-204ENST00000465860 MBOAT2Q6ZWT7 520 aa4.13□□□□□ -1.75
EXOSC3-204ENST00000465860 NANOGNBQ7Z5D8 188 aa4.13□□□□□ -1.75
EXOSC3-204ENST00000465860 SKA3Q8IX90 412 aa4.13□□□□□ -1.75
EXOSC3-204ENST00000465860 C17orf78Q8N4C9 275 aa4.13□□□□□ -1.75
EXOSC3-204ENST00000465860 PAQR4Q8N4S7 273 aaPredicted RBP4.13□□□□□ -1.75
EXOSC3-204ENST00000465860 CCDC197Q8NCU1 140 aa4.13□□□□□ -1.75
EXOSC3-204ENST00000465860 MAPK1IP1LQ8NDC0 245 aa4.13□□□□□ -1.75
EXOSC3-204ENST00000465860 OR52J3Q8NH60 311 aa4.13□□□□□ -1.75
EXOSC3-204ENST00000465860 OR51A7Q8NH64 312 aa4.13□□□□□ -1.75
EXOSC3-204ENST00000465860 OR6X1Q8NH79 312 aa4.13□□□□□ -1.75
EXOSC3-204ENST00000465860 ZNF519Q8TB69 540 aa4.13□□□□□ -1.75
EXOSC3-204ENST00000465860 MAGEE2Q8TD90 523 aaPredicted RBP4.13□□□□□ -1.75
EXOSC3-204ENST00000465860 GEMIN6Q8WXD5 167 aaKnown RBP4.13□□□□□ -1.75
EXOSC3-204ENST00000465860 MCHR2Q969V1 340 aa4.13□□□□□ -1.75
EXOSC3-204ENST00000465860 NABP1Q96AH0 204 aa4.13□□□□□ -1.75
EXOSC3-204ENST00000465860 R3HDM4Q96D70 268 aa4.13□□□□□ -1.75
EXOSC3-204ENST00000465860 RADILQ96JH8 1075 aa4.13□□□□□ -1.75
EXOSC3-204ENST00000465860 LRR1Q96L50 414 aa4.13□□□□□ -1.75
EXOSC3-204ENST00000465860 HS6ST2Q96MM7 605 aa4.13□□□□□ -1.75
EXOSC3-204ENST00000465860 FOXN4Q96NZ1 517 aa4.13□□□□□ -1.75
EXOSC3-204ENST00000465860 SLC38A2Q96QD8 506 aa4.13□□□□□ -1.75
EXOSC3-204ENST00000465860 TSPAN32Q96QS1 320 aa4.13□□□□□ -1.75
EXOSC3-204ENST00000465860 SEPHS2Q99611 448 aa4.13□□□□□ -1.75
EXOSC3-204ENST00000465860 SH3GL3Q99963 347 aa4.13□□□□□ -1.75
EXOSC3-204ENST00000465860 FNDC11Q9BVV2 318 aa4.13□□□□□ -1.75
EXOSC3-204ENST00000465860 ULBP2Q9BZM5 246 aa4.13□□□□□ -1.75
EXOSC3-204ENST00000465860 POLR2J2Q9GZM3 115 aaKnown RBP4.13□□□□□ -1.75
EXOSC3-204ENST00000465860 POLR2J3Q9H1A7 115 aaKnown RBP4.13□□□□□ -1.75
EXOSC3-204ENST00000465860 GORASP2Q9H8Y8 452 aa4.13□□□□□ -1.75
EXOSC3-204ENST00000465860 ZNF701Q9NV72 531 aaPredicted RBP4.13□□□□□ -1.75
EXOSC3-204ENST00000465860 TAS2R1Q9NYW7 299 aa4.13□□□□□ -1.75
EXOSC3-204ENST00000465860 GLTPQ9NZD2 209 aa4.13□□□□□ -1.75
EXOSC3-204ENST00000465860 ZNF346Q9UL40 294 aaKnown RBP4.13□□□□□ -1.75
EXOSC3-204ENST00000465860 NDRG4Q9ULP0 352 aaKnown RBP4.13□□□□□ -1.75
EXOSC3-204ENST00000465860 AMDHD2Q9Y303 409 aa4.13□□□□□ -1.75
EXOSC3-204ENST00000465860 MED31Q9Y3C7 131 aa4.13□□□□□ -1.75
EXOSC3-204ENST00000465860 ENPP4Q9Y6X5 453 aa4.13□□□□□ -1.75
EXOSC3-204ENST00000465860 MALRD1Q5VYJ5 2156 aa4.13□□□□□ -1.75
EXOSC3-204ENST00000465860 ABCA1O95477 2261 aa4.12□□□□□ -1.75
EXOSC3-204ENST00000465860 A0A096LNT2 108 aa4.12□□□□□ -1.75
EXOSC3-204ENST00000465860 A0A1W2PRQ8 180 aa4.12□□□□□ -1.75
EXOSC3-204ENST00000465860 SH3PXD2BA1X283 911 aa4.12□□□□□ -1.75
EXOSC3-204ENST00000465860 ZNF726A6NNF4 738 aa4.12□□□□□ -1.75
EXOSC3-204ENST00000465860 EFCAB9A8MZ26 197 aa4.12□□□□□ -1.75
EXOSC3-204ENST00000465860 H7C1Q1 480 aa4.12□□□□□ -1.75
EXOSC3-204ENST00000465860 DCTN6O00399 190 aa4.12□□□□□ -1.75
EXOSC3-204ENST00000465860 DHHO43323 396 aa4.12□□□□□ -1.75
EXOSC3-204ENST00000465860 KCNAB3O43448 404 aa4.12□□□□□ -1.75
EXOSC3-204ENST00000465860 GPRIN2O60269 458 aa4.12□□□□□ -1.75
EXOSC3-204ENST00000465860 MGRN1O60291 552 aa4.12□□□□□ -1.75
EXOSC3-204ENST00000465860 OR6A2O95222 327 aa4.12□□□□□ -1.75
EXOSC3-204ENST00000465860 BCL10O95999 233 aa4.12□□□□□ -1.75
EXOSC3-204ENST00000465860 IGHMP01871 453 aa4.12□□□□□ -1.75
EXOSC3-204ENST00000465860 H1F0P07305 194 aaKnown RBP4.12□□□□□ -1.75
EXOSC3-204ENST00000465860 NPSP0C0P6 89 aa4.12□□□□□ -1.75
EXOSC3-204ENST00000465860 PF4V1P10720 104 aa4.12□□□□□ -1.75
EXOSC3-204ENST00000465860 THRBP10828 461 aa4.12□□□□□ -1.75
EXOSC3-204ENST00000465860 CD79AP11912 226 aa4.12□□□□□ -1.75
EXOSC3-204ENST00000465860 PAX1P15863 534 aa4.12□□□□□ -1.75
EXOSC3-204ENST00000465860 CBR1P16152 277 aa4.12□□□□□ -1.75
EXOSC3-204ENST00000465860 ACADSP16219 412 aa4.12□□□□□ -1.75
EXOSC3-204ENST00000465860 TTKP33981 857 aa4.12□□□□□ -1.75
EXOSC3-204ENST00000465860 CAPZA2P47755 286 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms