RNA–Protein interactions for RNA: ENST00000465459.2

HLA-F-223, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 623 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-223ENST00000465459 LAMP5Q9UJQ1 280 aa12.78□□□□□ -0.36
HLA-F-223ENST00000465459 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.77□□□□□ -0.37
HLA-F-223ENST00000465459 DEFB108AA8MXU0 73 aa12.77□□□□□ -0.37
HLA-F-223ENST00000465459 J3QRE1 110 aa12.77□□□□□ -0.37
HLA-F-223ENST00000465459 M0R1B8 84 aa12.77□□□□□ -0.37
HLA-F-223ENST00000465459 CRYAAP02489 173 aa12.77□□□□□ -0.37
HLA-F-223ENST00000465459 LYNP07948 512 aa12.77□□□□□ -0.37
HLA-F-223ENST00000465459 MRPL3P09001 348 aaKnown RBP12.77□□□□□ -0.37
HLA-F-223ENST00000465459 CECR9P0C854 216 aa12.77□□□□□ -0.37
HLA-F-223ENST00000465459 PIPP12273 146 aaPredicted RBP12.77□□□□□ -0.37
HLA-F-223ENST00000465459 STOMP27105 288 aa12.77□□□□□ -0.37
HLA-F-223ENST00000465459 APLNRP35414 380 aa12.77□□□□□ -0.37
HLA-F-223ENST00000465459 SLC15A1P46059 708 aa12.77□□□□□ -0.37
HLA-F-223ENST00000465459 GDI2P50395 445 aaKnown RBP12.77□□□□□ -0.37
HLA-F-223ENST00000465459 SMN1Q16637 294 aaKnown RBP12.77□□□□□ -0.37
HLA-F-223ENST00000465459 TBC1D28Q2M2D7 210 aa12.77□□□□□ -0.37
HLA-F-223ENST00000465459 KRT80Q6KB66 452 aa12.77□□□□□ -0.37
HLA-F-223ENST00000465459 KCTD18Q6PI47 426 aaPredicted RBP12.77□□□□□ -0.37
HLA-F-223ENST00000465459 DEGS2Q6QHC5 323 aa12.77□□□□□ -0.37
HLA-F-223ENST00000465459 CFAP77Q6ZQR2 320 aa12.77□□□□□ -0.37
HLA-F-223ENST00000465459 EGFL6Q8IUX8 553 aa12.77□□□□□ -0.37
HLA-F-223ENST00000465459 SLC35F2Q8IXU6 374 aa12.77□□□□□ -0.37
HLA-F-223ENST00000465459 CPEB3Q8NE35 698 aaKnown RBP12.77□□□□□ -0.37
HLA-F-223ENST00000465459 SLC30A7Q8NEW0 376 aa12.77□□□□□ -0.37
HLA-F-223ENST00000465459 AKR7LQ8NHP1 331 aa12.77□□□□□ -0.37
HLA-F-223ENST00000465459 RNF133Q8WVZ7 376 aa12.77□□□□□ -0.37
HLA-F-223ENST00000465459 LGALS12Q96DT0 336 aa12.77□□□□□ -0.37
HLA-F-223ENST00000465459 DCLRE1CQ96SD1 692 aaKnown RBP12.77□□□□□ -0.37
HLA-F-223ENST00000465459 ATF6BQ99941 703 aa12.77□□□□□ -0.37
HLA-F-223ENST00000465459 KCNS3Q9BQ31 491 aa12.77□□□□□ -0.37
HLA-F-223ENST00000465459 PNRC2Q9NPJ4 139 aaKnown RBP12.77□□□□□ -0.37
HLA-F-223ENST00000465459 INPP5EQ9NRR6 644 aa12.77□□□□□ -0.37
HLA-F-223ENST00000465459 CNOT2Q9NZN8 540 aaKnown RBP12.77□□□□□ -0.37
HLA-F-223ENST00000465459 LRRC42Q9Y546 428 aa12.77□□□□□ -0.37
HLA-F-223ENST00000465459 FAM221AA4D161 298 aa12.76□□□□□ -0.37
HLA-F-223ENST00000465459 EFCAB10A6NFE3 127 aa12.76□□□□□ -0.37
HLA-F-223ENST00000465459 DPRXA6NFQ7 191 aa12.76□□□□□ -0.37
HLA-F-223ENST00000465459 A6NNC1 897 aa12.76□□□□□ -0.37
HLA-F-223ENST00000465459 ZNF878C9JN71 531 aa12.76□□□□□ -0.37
HLA-F-223ENST00000465459 ZNF670-ZNF695F2Z2N8 137 aa12.76□□□□□ -0.37
HLA-F-223ENST00000465459 ICMTO60725 284 aa12.76□□□□□ -0.37
HLA-F-223ENST00000465459 CCDC159P0C7I6 412 aa12.76□□□□□ -0.37
HLA-F-223ENST00000465459 PSKH1P11801 424 aa12.76□□□□□ -0.37
HLA-F-223ENST00000465459 APEX1P27695 318 aaKnown RBP12.76□□□□□ -0.37
HLA-F-223ENST00000465459 RPS27P42677 84 aaKnown RBP12.76□□□□□ -0.37
HLA-F-223ENST00000465459 HTR5AP47898 357 aa12.76□□□□□ -0.37
HLA-F-223ENST00000465459 GRB2P62993 217 aaKnown RBP12.76□□□□□ -0.37
HLA-F-223ENST00000465459 NAAAQ02083 359 aa12.76□□□□□ -0.37
HLA-F-223ENST00000465459 ROM1Q03395 351 aa12.76□□□□□ -0.37
HLA-F-223ENST00000465459 BSPH1Q075Z2 132 aa12.76□□□□□ -0.37
HLA-F-223ENST00000465459 MED21Q13503 144 aa12.76□□□□□ -0.37
HLA-F-223ENST00000465459 LAIR2Q6ISS4 152 aa12.76□□□□□ -0.37
HLA-F-223ENST00000465459 ARL9Q6T311 187 aa12.76□□□□□ -0.37
HLA-F-223ENST00000465459 ACBD7Q8N6N7 88 aa12.76□□□□□ -0.37
HLA-F-223ENST00000465459 OR4F15Q8NGB8 312 aa12.76□□□□□ -0.37
HLA-F-223ENST00000465459 THEM6Q8WUY1 208 aa12.76□□□□□ -0.37
HLA-F-223ENST00000465459 SLAMF6Q96DU3 332 aa12.76□□□□□ -0.37
HLA-F-223ENST00000465459 PLPPR2Q96GM1 343 aa12.76□□□□□ -0.37
HLA-F-223ENST00000465459 MS4A3Q96HJ5 214 aa12.76□□□□□ -0.37
HLA-F-223ENST00000465459 POM121L2Q96KW2 1035 aa12.76□□□□□ -0.37
HLA-F-223ENST00000465459 CNBD2Q96M20 576 aa12.76□□□□□ -0.37
HLA-F-223ENST00000465459 TMEM204Q9BSN7 226 aa12.76□□□□□ -0.37
HLA-F-223ENST00000465459 JAM3Q9BX67 310 aa12.76□□□□□ -0.37
HLA-F-223ENST00000465459 NIPAL2Q9H841 368 aa12.76□□□□□ -0.37
HLA-F-223ENST00000465459 AMBNQ9NP70 447 aa12.76□□□□□ -0.37
HLA-F-223ENST00000465459 FGF20Q9NP95 211 aaPredicted RBP12.76□□□□□ -0.37
HLA-F-223ENST00000465459 PTPN13Q12923 2485 aa12.76□□□□□ -0.37
HLA-F-223ENST00000465459 IGHV2OR16-5A0A0B4J2B6 119 aa12.75□□□□□ -0.37
HLA-F-223ENST00000465459 J3QW42 95 aa12.75□□□□□ -0.37
HLA-F-223ENST00000465459 ZNF254O75437 659 aa12.75□□□□□ -0.37
HLA-F-223ENST00000465459 IGHA1P01876 353 aa12.75□□□□□ -0.37
HLA-F-223ENST00000465459 APOC1P02654 83 aa12.75□□□□□ -0.37
HLA-F-223ENST00000465459 CD3EP07766 207 aa12.75□□□□□ -0.37
HLA-F-223ENST00000465459 CELA3BP08861 270 aa12.75□□□□□ -0.37
HLA-F-223ENST00000465459 ZNF35P13682 527 aa12.75□□□□□ -0.37
HLA-F-223ENST00000465459 DCKP27707 260 aa12.75□□□□□ -0.37
HLA-F-223ENST00000465459 CADP27708 2225 aa12.75□□□□□ -0.37
HLA-F-223ENST00000465459 LOXP28300 417 aaPredicted RBP12.75□□□□□ -0.37
HLA-F-223ENST00000465459 PCSK6P29122 969 aa12.75□□□□□ -0.37
HLA-F-223ENST00000465459 EGR3Q06889 387 aa12.75□□□□□ -0.37
HLA-F-223ENST00000465459 KRTAP27-1Q3LI81 207 aa12.75□□□□□ -0.37
HLA-F-223ENST00000465459 UNQ6126/PRO20091Q6UXV3 157 aa12.75□□□□□ -0.37
HLA-F-223ENST00000465459 C1orf174Q8IYL3 243 aa12.75□□□□□ -0.37
HLA-F-223ENST00000465459 OR10H4Q8NGA5 316 aa12.75□□□□□ -0.37
HLA-F-223ENST00000465459 OR10S1Q8NGN2 331 aa12.75□□□□□ -0.37
HLA-F-223ENST00000465459 SPTSSAQ969W0 71 aa12.75□□□□□ -0.37
HLA-F-223ENST00000465459 C14orf79Q96F83 325 aa12.75□□□□□ -0.37
HLA-F-223ENST00000465459 MRPL48Q96GC5 212 aaKnown RBP12.75□□□□□ -0.37
HLA-F-223ENST00000465459 CDH20Q9HBT6 801 aa12.75□□□□□ -0.37
HLA-F-223ENST00000465459 SCN3BQ9NY72 215 aa12.75□□□□□ -0.37
HLA-F-223ENST00000465459 PSORS1C1Q9UIG5 152 aa12.75□□□□□ -0.37
HLA-F-223ENST00000465459 RNF115Q9Y4L5 304 aa12.75□□□□□ -0.37
HLA-F-223ENST00000465459 SPEF1Q9Y4P9 236 aa12.75□□□□□ -0.37
HLA-F-223ENST00000465459 ABCA4P78363 2273 aa12.74□□□□□ -0.37
HLA-F-223ENST00000465459 RTTNQ86VV8 2226 aa12.74□□□□□ -0.37
HLA-F-223ENST00000465459 LOC100509620A0A075B734 347 aa12.74□□□□□ -0.37
HLA-F-223ENST00000465459 C5orf49A4QMS7 147 aa12.74□□□□□ -0.37
HLA-F-223ENST00000465459 ABCD4O14678 606 aa12.74□□□□□ -0.37
HLA-F-223ENST00000465459 SIAH2O43255 324 aa12.74□□□□□ -0.37
HLA-F-223ENST00000465459 FAM20BO75063 409 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms