RNA–Protein interactions for RNA: ENST00000465425.1

SYNE4-204, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 2

Gene SYNE4, Length 2,339 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-204ENST00000465425 DEGS2Q6QHC5 323 aa16.39■□□□□ 0.21
SYNE4-204ENST00000465425 ARSKQ6UWY0 536 aa16.39■□□□□ 0.21
SYNE4-204ENST00000465425 COX15Q7KZN9 410 aa16.39■□□□□ 0.21
SYNE4-204ENST00000465425 SLC25A21Q9BQT8 299 aaPredicted RBP16.39■□□□□ 0.21
SYNE4-204ENST00000465425 B3GNT4Q9C0J1 378 aa16.39■□□□□ 0.21
SYNE4-204ENST00000465425 TGIF2Q9GZN2 237 aa16.39■□□□□ 0.21
SYNE4-204ENST00000465425 CHST6Q9GZX3 395 aa16.39■□□□□ 0.21
SYNE4-204ENST00000465425 ARL6Q9H0F7 186 aa16.39■□□□□ 0.21
SYNE4-204ENST00000465425 ALX4Q9H161 411 aaPredicted RBP16.39■□□□□ 0.21
SYNE4-204ENST00000465425 ZNF768Q9H5H4 540 aaKnown RBP16.39■□□□□ 0.21
SYNE4-204ENST00000465425 CHST11Q9NPF2 352 aa16.39■□□□□ 0.21
SYNE4-204ENST00000465425 TMEM82A0PJX8 343 aa16.38■□□□□ 0.21
SYNE4-204ENST00000465425 M0QYG6 137 aa16.38■□□□□ 0.21
SYNE4-204ENST00000465425 PMS2P2O95744 297 aa16.38■□□□□ 0.21
SYNE4-204ENST00000465425 ITGB2P05107 769 aa16.38■□□□□ 0.21
SYNE4-204ENST00000465425 ZNF250P15622 560 aa16.38■□□□□ 0.21
SYNE4-204ENST00000465425 M6PRP20645 277 aa16.38■□□□□ 0.21
SYNE4-204ENST00000465425 AFF3P51826 1226 aaKnown RBP16.38■□□□□ 0.21
SYNE4-204ENST00000465425 SUMO3P55854 103 aaPredicted RBP16.38■□□□□ 0.21
SYNE4-204ENST00000465425 MPPED2Q15777 294 aa16.38■□□□□ 0.21
SYNE4-204ENST00000465425 RHBDD2Q6NTF9 364 aa16.38■□□□□ 0.21
SYNE4-204ENST00000465425 CORO6Q6QEF8 472 aa16.38■□□□□ 0.21
SYNE4-204ENST00000465425 TMED4Q7Z7H5 227 aa16.38■□□□□ 0.21
SYNE4-204ENST00000465425 CDH26Q8IXH8 852 aa16.38■□□□□ 0.21
SYNE4-204ENST00000465425 SLC25A45Q8N413 288 aa16.38■□□□□ 0.21
SYNE4-204ENST00000465425 OR10H5Q8NGA6 315 aa16.38■□□□□ 0.21
SYNE4-204ENST00000465425 FOXRED1Q96CU9 486 aaPredicted RBP16.38■□□□□ 0.21
SYNE4-204ENST00000465425 CCDC120Q96HB5 630 aa16.38■□□□□ 0.21
SYNE4-204ENST00000465425 FOXQ1Q9C009 403 aa16.38■□□□□ 0.21
SYNE4-204ENST00000465425 SLC22A11Q9NSA0 550 aa16.38■□□□□ 0.21
SYNE4-204ENST00000465425 ARID1BQ8NFD5 2236 aaPredicted RBP16.38■□□□□ 0.21
SYNE4-204ENST00000465425 OR6C65A6NJZ3 312 aa16.37■□□□□ 0.21
SYNE4-204ENST00000465425 ZNF736B4DX44 427 aaPredicted RBP16.37■□□□□ 0.21
SYNE4-204ENST00000465425 P2RY10O00398 339 aa16.37■□□□□ 0.21
SYNE4-204ENST00000465425 CAPZA1P52907 286 aa16.37■□□□□ 0.21
SYNE4-204ENST00000465425 SMAD4Q13485 552 aaKnown RBP16.37■□□□□ 0.21
SYNE4-204ENST00000465425 HLXQ14774 488 aaPredicted RBP16.37■□□□□ 0.21
SYNE4-204ENST00000465425 PCK2Q16822 640 aa16.37■□□□□ 0.21
SYNE4-204ENST00000465425 DCAF12L2Q5VW00 463 aa16.37■□□□□ 0.21
SYNE4-204ENST00000465425 OR10K2Q6IF99 312 aa16.37■□□□□ 0.21
SYNE4-204ENST00000465425 TMUB2Q71RG4 321 aa16.37■□□□□ 0.21
SYNE4-204ENST00000465425 KLRF1Q9NZS2 232 aa16.37■□□□□ 0.21
SYNE4-204ENST00000465425 IGKV1D-43A0A0B4J1Z2 117 aa16.37■□□□□ 0.21
SYNE4-204ENST00000465425 METTL21EPA6NDL7 271 aa16.37■□□□□ 0.21
SYNE4-204ENST00000465425 NPIPB13A6NJU9 1138 aa16.37■□□□□ 0.21
SYNE4-204ENST00000465425 NPIPB4C9JG80 1138 aa16.37■□□□□ 0.21
SYNE4-204ENST00000465425 BCAT2O15382 392 aaPredicted RBP16.37■□□□□ 0.21
SYNE4-204ENST00000465425 ZNF354AO60765 605 aaPredicted RBP16.37■□□□□ 0.21
SYNE4-204ENST00000465425 MELTFP08582 738 aa16.37■□□□□ 0.21
SYNE4-204ENST00000465425 OR4E1P0C645 316 aa16.37■□□□□ 0.21
SYNE4-204ENST00000465425 GNALP38405 381 aa16.37■□□□□ 0.21
SYNE4-204ENST00000465425 FOXF1Q12946 379 aa16.37■□□□□ 0.21
SYNE4-204ENST00000465425 ANKRD37Q7Z713 158 aa16.37■□□□□ 0.21
SYNE4-204ENST00000465425 GALNT16Q8N428 558 aa16.37■□□□□ 0.21
SYNE4-204ENST00000465425 NKD1Q969G9 470 aa16.37■□□□□ 0.21
SYNE4-204ENST00000465425 MESP1Q9BRJ9 268 aa16.37■□□□□ 0.21
SYNE4-204ENST00000465425 TINAGL1Q9GZM7 467 aaPredicted RBP16.37■□□□□ 0.21
SYNE4-204ENST00000465425 KCNN3Q9UGI6 736 aa16.37■□□□□ 0.21
SYNE4-204ENST00000465425 FARSAQ9Y285 508 aaKnown RBP16.37■□□□□ 0.21
SYNE4-204ENST00000465425 ZNF208O43345 1280 aa16.36■□□□□ 0.21
SYNE4-204ENST00000465425 PPP3CBP16298 524 aa16.36■□□□□ 0.21
SYNE4-204ENST00000465425 EIF1AXP47813 144 aaKnown RBP16.36■□□□□ 0.21
SYNE4-204ENST00000465425 SCGB2B2Q4G0G5 96 aa16.36■□□□□ 0.21
SYNE4-204ENST00000465425 SFRP5Q5T4F7 317 aa16.36■□□□□ 0.21
SYNE4-204ENST00000465425 KLHL24Q6TFL4 600 aa16.36■□□□□ 0.21
SYNE4-204ENST00000465425 ZNF584Q8IVC4 421 aa16.36■□□□□ 0.21
SYNE4-204ENST00000465425 ACBD4Q8NC06 268 aa16.36■□□□□ 0.21
SYNE4-204ENST00000465425 ASB13Q8WXK3 278 aa16.36■□□□□ 0.21
SYNE4-204ENST00000465425 RBPMSQ93062 196 aaKnown RBP16.36■□□□□ 0.21
SYNE4-204ENST00000465425 KIF26BQ2KJY2 2108 aa16.36■□□□□ 0.21
SYNE4-204ENST00000465425 FER1L5A0AVI2 2057 aa16.36■□□□□ 0.21
SYNE4-204ENST00000465425 LOC390937A0A1W2PQ73 354 aa16.36■□□□□ 0.21
SYNE4-204ENST00000465425 B8ZZF3 427 aa16.36■□□□□ 0.21
SYNE4-204ENST00000465425 LMX1BO60663 402 aa16.36■□□□□ 0.21
SYNE4-204ENST00000465425 CD37P11049 281 aa16.36■□□□□ 0.21
SYNE4-204ENST00000465425 MMP16P51512 607 aa16.36■□□□□ 0.21
SYNE4-204ENST00000465425 ZNF41P51814 821 aaPredicted RBP16.36■□□□□ 0.21
SYNE4-204ENST00000465425 MOGAT2Q3SYC2 334 aa16.36■□□□□ 0.21
SYNE4-204ENST00000465425 C1orf100Q5SVJ3 147 aa16.36■□□□□ 0.21
SYNE4-204ENST00000465425 OR4D6Q8NGJ1 314 aa16.36■□□□□ 0.21
SYNE4-204ENST00000465425 NUBPLQ8TB37 319 aa16.36■□□□□ 0.21
SYNE4-204ENST00000465425 RNF133Q8WVZ7 376 aa16.36■□□□□ 0.21
SYNE4-204ENST00000465425 PTX4Q96A99 478 aa16.36■□□□□ 0.21
SYNE4-204ENST00000465425 EMC6Q9BV81 110 aa16.36■□□□□ 0.21
SYNE4-204ENST00000465425 C1orf198Q9H425 327 aa16.36■□□□□ 0.21
SYNE4-204ENST00000465425 SDK1Q7Z5N4 2213 aa16.35■□□□□ 0.21
SYNE4-204ENST00000465425 TRBV11-1A0A0K0K1C0 115 aa16.35■□□□□ 0.21
SYNE4-204ENST00000465425 TMEM235A6NFC5 223 aa16.35■□□□□ 0.21
SYNE4-204ENST00000465425 H3BUI4 141 aa16.35■□□□□ 0.21
SYNE4-204ENST00000465425 LDLRAD4O15165 306 aa16.35■□□□□ 0.21
SYNE4-204ENST00000465425 BIDP55957 195 aa16.35■□□□□ 0.21
SYNE4-204ENST00000465425 ALKAL2Q6UX46 152 aa16.35■□□□□ 0.21
SYNE4-204ENST00000465425 WDFY1Q8IWB7 410 aa16.35■□□□□ 0.21
SYNE4-204ENST00000465425 BPIFB2Q8N4F0 458 aa16.35■□□□□ 0.21
SYNE4-204ENST00000465425 C12orf45Q8N5I9 185 aaPredicted RBP16.35■□□□□ 0.21
SYNE4-204ENST00000465425 FGGYQ96C11 551 aa16.35■□□□□ 0.21
SYNE4-204ENST00000465425 DUSP15Q9H1R2 295 aaPredicted RBP16.35■□□□□ 0.21
SYNE4-204ENST00000465425 ALKBH4Q9NXW9 302 aa16.35■□□□□ 0.21
SYNE4-204ENST00000465425 PPP4R1LQ9P1A2 415 aa16.35■□□□□ 0.21
SYNE4-204ENST00000465425 B3GALT5Q9Y2C3 310 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms