RNA–Protein interactions for RNA: ENST00000464480.1

HMGXB4-205, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-205ENST00000464480 PRMT2P55345 433 aa2.4□□□□□ -2.03
HMGXB4-205ENST00000464480 REG3AQ06141 175 aa2.4□□□□□ -2.03
HMGXB4-205ENST00000464480 RAD51Q06609 339 aa2.4□□□□□ -2.03
HMGXB4-205ENST00000464480 FLOT2Q14254 428 aa2.4□□□□□ -2.03
HMGXB4-205ENST00000464480 PRPSAP1Q14558 356 aa2.4□□□□□ -2.03
HMGXB4-205ENST00000464480 ANGPT1Q15389 498 aa2.4□□□□□ -2.03
HMGXB4-205ENST00000464480 DNAL1Q4LDG9 190 aa2.4□□□□□ -2.03
HMGXB4-205ENST00000464480 XKR7Q5GH72 579 aa2.4□□□□□ -2.03
HMGXB4-205ENST00000464480 TMEM255AQ5JRV8 349 aa2.4□□□□□ -2.03
HMGXB4-205ENST00000464480 HES5Q5TA89 166 aa2.4□□□□□ -2.03
HMGXB4-205ENST00000464480 METTL21CQ5VZV1 264 aa2.4□□□□□ -2.03
HMGXB4-205ENST00000464480 IGFL2Q6UWQ7 119 aa2.4□□□□□ -2.03
HMGXB4-205ENST00000464480 C4orf22Q6V702 233 aa2.4□□□□□ -2.03
HMGXB4-205ENST00000464480 IFT20Q8IY31 132 aa2.4□□□□□ -2.03
HMGXB4-205ENST00000464480 ENTHD1Q8IYW4 607 aa2.4□□□□□ -2.03
HMGXB4-205ENST00000464480 MREGQ8N565 214 aa2.4□□□□□ -2.03
HMGXB4-205ENST00000464480 MS4A15Q8N5U1 240 aa2.4□□□□□ -2.03
HMGXB4-205ENST00000464480 EID2Q8N6I1 236 aa2.4□□□□□ -2.03
HMGXB4-205ENST00000464480 OR5T1Q8NG75 326 aa2.4□□□□□ -2.03
HMGXB4-205ENST00000464480 ZNF461Q8TAF7 563 aa2.4□□□□□ -2.03
HMGXB4-205ENST00000464480 RAB3IL1Q8TBN0 382 aa2.4□□□□□ -2.03
HMGXB4-205ENST00000464480 CD300LFQ8TDQ1 290 aa2.4□□□□□ -2.03
HMGXB4-205ENST00000464480 CAPSLQ8WWF8 208 aa2.4□□□□□ -2.03
HMGXB4-205ENST00000464480 TMEM158Q8WZ71 300 aa2.4□□□□□ -2.03
HMGXB4-205ENST00000464480 RAD51AP1Q96B01 352 aa2.4□□□□□ -2.03
HMGXB4-205ENST00000464480 DNAJC19Q96DA6 116 aa2.4□□□□□ -2.03
HMGXB4-205ENST00000464480 AURKBQ96GD4 344 aaPredicted RBP2.4□□□□□ -2.03
HMGXB4-205ENST00000464480 RNF185Q96GF1 192 aa2.4□□□□□ -2.03
HMGXB4-205ENST00000464480 SMIM10Q96HG1 83 aa2.4□□□□□ -2.03
HMGXB4-205ENST00000464480 TRNT1Q96Q11 434 aaKnown RBP2.4□□□□□ -2.03
HMGXB4-205ENST00000464480 CYTH2Q99418 400 aa2.4□□□□□ -2.03
HMGXB4-205ENST00000464480 CALN1Q9BXU9 219 aa2.4□□□□□ -2.03
HMGXB4-205ENST00000464480 GABARAPL3Q9BY60 117 aa2.4□□□□□ -2.03
HMGXB4-205ENST00000464480 DNTTIP1Q9H147 329 aa2.4□□□□□ -2.03
HMGXB4-205ENST00000464480 OR51V1Q9H2C8 321 aa2.4□□□□□ -2.03
HMGXB4-205ENST00000464480 SLC40A1Q9NP59 571 aa2.4□□□□□ -2.03
HMGXB4-205ENST00000464480 SLCO1B3Q9NPD5 702 aa2.4□□□□□ -2.03
HMGXB4-205ENST00000464480 INPP5EQ9NRR6 644 aa2.4□□□□□ -2.03
HMGXB4-205ENST00000464480 FAIMQ9NVQ4 179 aa2.4□□□□□ -2.03
HMGXB4-205ENST00000464480 RAB20Q9NX57 234 aa2.4□□□□□ -2.03
HMGXB4-205ENST00000464480 UXTQ9UBK9 157 aaPredicted RBP2.4□□□□□ -2.03
HMGXB4-205ENST00000464480 CSDC2Q9Y534 153 aaKnown RBP2.4□□□□□ -2.03
HMGXB4-205ENST00000464480 WSB1Q9Y6I7 421 aa2.4□□□□□ -2.03
HMGXB4-205ENST00000464480 GAPVD1Q14C86 1478 aa2.39□□□□□ -2.03
HMGXB4-205ENST00000464480 IGKV1D-13A0A0B4J2D9 117 aa2.39□□□□□ -2.03
HMGXB4-205ENST00000464480 A0A1B0GTQ1 180 aa2.39□□□□□ -2.03
HMGXB4-205ENST00000464480 TMEM120BA0PK00 339 aa2.39□□□□□ -2.03
HMGXB4-205ENST00000464480 ZNF726A6NNF4 738 aa2.39□□□□□ -2.03
HMGXB4-205ENST00000464480 TCP11X1B4DZS4 312 aa2.39□□□□□ -2.03
HMGXB4-205ENST00000464480 WRBO00258 174 aa2.39□□□□□ -2.03
HMGXB4-205ENST00000464480 PFDN6O15212 129 aa2.39□□□□□ -2.03
HMGXB4-205ENST00000464480 SLC22A1O15245 554 aa2.39□□□□□ -2.03
HMGXB4-205ENST00000464480 EIF3HO15372 352 aaKnown RBP eCLIP2.39□□□□□ -2.03
HMGXB4-205ENST00000464480 TRAPPC3O43617 180 aa2.39□□□□□ -2.03
HMGXB4-205ENST00000464480 SHOX2O60902 331 aaPredicted RBP2.39□□□□□ -2.03
HMGXB4-205ENST00000464480 SERPINB7O75635 380 aa2.39□□□□□ -2.03
HMGXB4-205ENST00000464480 FGGP02679 453 aa2.39□□□□□ -2.03
HMGXB4-205ENST00000464480 BGLAPP02818 100 aa2.39□□□□□ -2.03
HMGXB4-205ENST00000464480 ZDHHC11BP0C7U3 371 aa2.39□□□□□ -2.03
HMGXB4-205ENST00000464480 STAG3L3P0CL85 134 aa2.39□□□□□ -2.03
HMGXB4-205ENST00000464480 IGKV1-13P0DP09 117 aa2.39□□□□□ -2.03
HMGXB4-205ENST00000464480 ZNF43P17038 809 aa2.39□□□□□ -2.03
HMGXB4-205ENST00000464480 ZNF30P17039 623 aa2.39□□□□□ -2.03
HMGXB4-205ENST00000464480 SPAM1P38567 509 aa2.39□□□□□ -2.03
HMGXB4-205ENST00000464480 CXCL5P42830 114 aa2.39□□□□□ -2.03
HMGXB4-205ENST00000464480 OR1G1P47890 313 aa2.39□□□□□ -2.03
HMGXB4-205ENST00000464480 SSR4P51571 173 aa2.39□□□□□ -2.03
HMGXB4-205ENST00000464480 CCNG1P51959 295 aa2.39□□□□□ -2.03
HMGXB4-205ENST00000464480 PRRX1P54821 245 aa2.39□□□□□ -2.03
HMGXB4-205ENST00000464480 UCNP55089 124 aa2.39□□□□□ -2.03
HMGXB4-205ENST00000464480 GNG2P59768 71 aa2.39□□□□□ -2.03
HMGXB4-205ENST00000464480 GPX6P59796 221 aa2.39□□□□□ -2.03
HMGXB4-205ENST00000464480 KRTAP12-2P59991 146 aa2.39□□□□□ -2.03
HMGXB4-205ENST00000464480 RPL10AP62906 217 aaKnown RBP2.39□□□□□ -2.03
HMGXB4-205ENST00000464480 ECH1Q13011 328 aa2.39□□□□□ -2.03
HMGXB4-205ENST00000464480 FADDQ13158 208 aa2.39□□□□□ -2.03
HMGXB4-205ENST00000464480 CHRNA6Q15825 494 aa2.39□□□□□ -2.03
HMGXB4-205ENST00000464480 UAP1Q16222 522 aaPredicted RBP2.39□□□□□ -2.03
HMGXB4-205ENST00000464480 GUCA2BQ16661 112 aa2.39□□□□□ -2.03
HMGXB4-205ENST00000464480 TMEM183BQ1AE95 376 aa2.39□□□□□ -2.03
HMGXB4-205ENST00000464480 TTLL9Q3SXZ7 439 aa2.39□□□□□ -2.03
HMGXB4-205ENST00000464480 LCE3EQ5T5B0 92 aa2.39□□□□□ -2.03
HMGXB4-205ENST00000464480 C6orf183Q5T699 404 aa2.39□□□□□ -2.03
HMGXB4-205ENST00000464480 LIN9Q5TKA1 542 aa2.39□□□□□ -2.03
HMGXB4-205ENST00000464480 AGBL2Q5U5Z8 902 aa2.39□□□□□ -2.03
HMGXB4-205ENST00000464480 RAET1LQ5VY80 246 aa2.39□□□□□ -2.03
HMGXB4-205ENST00000464480 C3orf33Q6P1S2 294 aa2.39□□□□□ -2.03
HMGXB4-205ENST00000464480 TIFABQ6ZNK6 161 aa2.39□□□□□ -2.03
HMGXB4-205ENST00000464480 TMEM179Q6ZVK1 233 aa2.39□□□□□ -2.03
HMGXB4-205ENST00000464480 NIPA1Q7RTP0 329 aa2.39□□□□□ -2.03
HMGXB4-205ENST00000464480 HDDC2Q7Z4H3 204 aa2.39□□□□□ -2.03
HMGXB4-205ENST00000464480 TMCO2Q7Z6W1 182 aaPredicted RBP2.39□□□□□ -2.03
HMGXB4-205ENST00000464480 MMAAQ8IVH4 418 aaKnown RBP2.39□□□□□ -2.03
HMGXB4-205ENST00000464480 TMEM183AQ8IXX5 376 aa2.39□□□□□ -2.03
HMGXB4-205ENST00000464480 IQCKQ8N0W5 287 aa2.39□□□□□ -2.03
HMGXB4-205ENST00000464480 NATD1Q8N6N6 113 aa2.39□□□□□ -2.03
HMGXB4-205ENST00000464480 UBL4BQ8N7F7 174 aa2.39□□□□□ -2.03
HMGXB4-205ENST00000464480 Q8N9L7 120 aa2.39□□□□□ -2.03
HMGXB4-205ENST00000464480 TTC29Q8NA56 475 aaPredicted RBP2.39□□□□□ -2.03
HMGXB4-205ENST00000464480 ACTRT1Q8TDG2 376 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms