RNA–Protein interactions for RNA: ENST00000463988.1

SNRNP40-203, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-203ENST00000463988 KCNMB1Q16558 191 aa12.15□□□□□ -0.46
SNRNP40-203ENST00000463988 DCAF12L2Q5VW00 463 aa12.15□□□□□ -0.46
SNRNP40-203ENST00000463988 DPY19L2P2Q6ZN68 376 aa12.15□□□□□ -0.46
SNRNP40-203ENST00000463988 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.15□□□□□ -0.46
SNRNP40-203ENST00000463988 PTP4A1Q93096 173 aa12.15□□□□□ -0.46
SNRNP40-203ENST00000463988 RASD2Q96D21 266 aa12.15□□□□□ -0.46
SNRNP40-203ENST00000463988 RSRC1Q96IZ7 334 aaKnown RBP12.15□□□□□ -0.46
SNRNP40-203ENST00000463988 SAMD8Q96LT4 415 aa12.15□□□□□ -0.46
SNRNP40-203ENST00000463988 JMJD8Q96S16 334 aa12.15□□□□□ -0.46
SNRNP40-203ENST00000463988 DCLRE1CQ96SD1 692 aaKnown RBP12.15□□□□□ -0.46
SNRNP40-203ENST00000463988 MYLK2Q9H1R3 596 aa12.15□□□□□ -0.46
SNRNP40-203ENST00000463988 SYT4Q9H2B2 425 aa12.15□□□□□ -0.46
SNRNP40-203ENST00000463988 SPAG4Q9NPE6 437 aa12.15□□□□□ -0.46
SNRNP40-203ENST00000463988 PLEK2Q9NYT0 353 aa12.15□□□□□ -0.46
SNRNP40-203ENST00000463988 PCDHB10Q9UN67 800 aa12.15□□□□□ -0.46
SNRNP40-203ENST00000463988 STARD10Q9Y365 291 aa12.15□□□□□ -0.46
SNRNP40-203ENST00000463988 NPTNQ9Y639 398 aa12.15□□□□□ -0.46
SNRNP40-203ENST00000463988 TANC2Q9HCD6 1990 aa12.14□□□□□ -0.47
SNRNP40-203ENST00000463988 LOC105371242A0A075B767 164 aa12.14□□□□□ -0.47
SNRNP40-203ENST00000463988 SURF4O15260 269 aa12.14□□□□□ -0.47
SNRNP40-203ENST00000463988 GMNNO75496 209 aa12.14□□□□□ -0.47
SNRNP40-203ENST00000463988 IGHV2-70P01814 119 aa12.14□□□□□ -0.47
SNRNP40-203ENST00000463988 RAC2P15153 192 aa12.14□□□□□ -0.47
SNRNP40-203ENST00000463988 RGS6P49758 472 aa12.14□□□□□ -0.47
SNRNP40-203ENST00000463988 RPS6KA3P51812 740 aa12.14□□□□□ -0.47
SNRNP40-203ENST00000463988 KRT72Q14CN4 511 aa12.14□□□□□ -0.47
SNRNP40-203ENST00000463988 FGD3Q5JSP0 725 aa12.14□□□□□ -0.47
SNRNP40-203ENST00000463988 GLYATQ6IB77 296 aa12.14□□□□□ -0.47
SNRNP40-203ENST00000463988 PGM2L1Q6PCE3 622 aa12.14□□□□□ -0.47
SNRNP40-203ENST00000463988 THSD4Q6ZMP0 1018 aa12.14□□□□□ -0.47
SNRNP40-203ENST00000463988 ZNF283Q8N7M2 679 aa12.14□□□□□ -0.47
SNRNP40-203ENST00000463988 OR1F12Q8NHA8 337 aa12.14□□□□□ -0.47
SNRNP40-203ENST00000463988 NANPQ8TBE9 248 aa12.14□□□□□ -0.47
SNRNP40-203ENST00000463988 CMBLQ96DG6 245 aa12.14□□□□□ -0.47
SNRNP40-203ENST00000463988 FUZQ9BT04 418 aa12.14□□□□□ -0.47
SNRNP40-203ENST00000463988 POFUT1Q9H488 388 aa12.14□□□□□ -0.47
SNRNP40-203ENST00000463988 GORASP2Q9H8Y8 452 aa12.14□□□□□ -0.47
SNRNP40-203ENST00000463988 ASH2LQ9UBL3 628 aa12.14□□□□□ -0.47
SNRNP40-203ENST00000463988 IL19Q9UHD0 177 aa12.14□□□□□ -0.47
SNRNP40-203ENST00000463988 AURKCQ9UQB9 309 aa12.14□□□□□ -0.47
SNRNP40-203ENST00000463988 COA3Q9Y2R0 106 aaPredicted RBP12.14□□□□□ -0.47
SNRNP40-203ENST00000463988 IER3IP1Q9Y5U9 82 aa12.14□□□□□ -0.47
SNRNP40-203ENST00000463988 TRBV4-1A0A0J9YWV2 114 aa12.13□□□□□ -0.47
SNRNP40-203ENST00000463988 ISPDA4D126 451 aa12.13□□□□□ -0.47
SNRNP40-203ENST00000463988 UNC119BA6NIH7 251 aa12.13□□□□□ -0.47
SNRNP40-203ENST00000463988 IFNL4K9M1U5 179 aa12.13□□□□□ -0.47
SNRNP40-203ENST00000463988 IMPA2O14732 288 aa12.13□□□□□ -0.47
SNRNP40-203ENST00000463988 FOXH1O75593 365 aa12.13□□□□□ -0.47
SNRNP40-203ENST00000463988 CRABP1P29762 137 aa12.13□□□□□ -0.47
SNRNP40-203ENST00000463988 SMIM11AP58511 58 aa12.13□□□□□ -0.47
SNRNP40-203ENST00000463988 FXYD6P3P58550 94 aa12.13□□□□□ -0.47
SNRNP40-203ENST00000463988 SEC23BQ15437 767 aa12.13□□□□□ -0.47
SNRNP40-203ENST00000463988 TMEM155Q4W5P6 130 aa12.13□□□□□ -0.47
SNRNP40-203ENST00000463988 CCDC92Q53HC0 331 aaPredicted RBP12.13□□□□□ -0.47
SNRNP40-203ENST00000463988 SPRNQ5BIV9 151 aa12.13□□□□□ -0.47
SNRNP40-203ENST00000463988 DNM1P34Q6PK57 102 aa12.13□□□□□ -0.47
SNRNP40-203ENST00000463988 SMARCD3Q6STE5 483 aa12.13□□□□□ -0.47
SNRNP40-203ENST00000463988 FBXW12Q6X9E4 464 aa12.13□□□□□ -0.47
SNRNP40-203ENST00000463988 Q6ZR03 302 aa12.13□□□□□ -0.47
SNRNP40-203ENST00000463988 PTCHD4Q6ZW05 846 aa12.13□□□□□ -0.47
SNRNP40-203ENST00000463988 SPICQ8N5J4 248 aa12.13□□□□□ -0.47
SNRNP40-203ENST00000463988 OR2Z1Q8NG97 314 aa12.13□□□□□ -0.47
SNRNP40-203ENST00000463988 ST7LQ8TDW4 575 aa12.13□□□□□ -0.47
SNRNP40-203ENST00000463988 FAM216AQ8WUB2 273 aa12.13□□□□□ -0.47
SNRNP40-203ENST00000463988 SUCNR1Q9BXA5 334 aa12.13□□□□□ -0.47
SNRNP40-203ENST00000463988 NUAK2Q9H093 628 aa12.13□□□□□ -0.47
SNRNP40-203ENST00000463988 C7orf69Q9H7B7 122 aa12.13□□□□□ -0.47
SNRNP40-203ENST00000463988 TMEM106BQ9NUM4 274 aa12.13□□□□□ -0.47
SNRNP40-203ENST00000463988 EGFL7Q9UHF1 273 aa12.13□□□□□ -0.47
SNRNP40-203ENST00000463988 OPN4Q9UHM6 478 aa12.13□□□□□ -0.47
SNRNP40-203ENST00000463988 POLR3KQ9Y2Y1 108 aaPredicted RBP12.13□□□□□ -0.47
SNRNP40-203ENST00000463988 TRIM77I1YAP6 450 aa12.12□□□□□ -0.47
SNRNP40-203ENST00000463988 SOCS2O14508 198 aa12.12□□□□□ -0.47
SNRNP40-203ENST00000463988 ARPC3O15145 178 aa12.12□□□□□ -0.47
SNRNP40-203ENST00000463988 FSHBP01225 129 aa12.12□□□□□ -0.47
SNRNP40-203ENST00000463988 CPT2P23786 658 aa12.12□□□□□ -0.47
SNRNP40-203ENST00000463988 CDKN2AP42771 156 aaKnown RBP12.12□□□□□ -0.47
SNRNP40-203ENST00000463988 COMPP49747 757 aaPredicted RBP12.12□□□□□ -0.47
SNRNP40-203ENST00000463988 HIST1H3AP68431 136 aa12.12□□□□□ -0.47
SNRNP40-203ENST00000463988 HIST2H3PS2Q5TEC6 136 aa12.12□□□□□ -0.47
SNRNP40-203ENST00000463988 SLC27A4Q6P1M0 643 aa12.12□□□□□ -0.47
SNRNP40-203ENST00000463988 C12orf54Q6X4T0 127 aa12.12□□□□□ -0.47
SNRNP40-203ENST00000463988 HIST2H3AQ71DI3 136 aa12.12□□□□□ -0.47
SNRNP40-203ENST00000463988 LRRC28Q86X40 367 aaPredicted RBP12.12□□□□□ -0.47
SNRNP40-203ENST00000463988 KLHL36Q8N4N3 616 aa12.12□□□□□ -0.47
SNRNP40-203ENST00000463988 GJC3Q8NFK1 279 aa12.12□□□□□ -0.47
SNRNP40-203ENST00000463988 OR5L1Q8NGL2 311 aa12.12□□□□□ -0.47
SNRNP40-203ENST00000463988 APOBEC3DQ96AK3 386 aaPredicted RBP12.12□□□□□ -0.47
SNRNP40-203ENST00000463988 ELAC2Q9BQ52 826 aaKnown RBP12.12□□□□□ -0.47
SNRNP40-203ENST00000463988 RBM4Q9BWF3 364 aaKnown RBP12.12□□□□□ -0.47
SNRNP40-203ENST00000463988 HDHD2Q9H0R4 259 aa12.12□□□□□ -0.47
SNRNP40-203ENST00000463988 RERGLQ9H628 205 aa12.12□□□□□ -0.47
SNRNP40-203ENST00000463988 UBAP1Q9NZ09 502 aa12.12□□□□□ -0.47
SNRNP40-203ENST00000463988 ADA2Q9NZK5 511 aa12.12□□□□□ -0.47
SNRNP40-203ENST00000463988 PPP1R3CQ9UQK1 317 aa12.12□□□□□ -0.47
SNRNP40-203ENST00000463988 DYSFO75923 2080 aa12.12□□□□□ -0.47
SNRNP40-203ENST00000463988 ARHGAP32A7KAX9 2087 aa12.11□□□□□ -0.47
SNRNP40-203ENST00000463988 RER1O15258 196 aa12.11□□□□□ -0.47
SNRNP40-203ENST00000463988 SEMG1P04279 462 aa12.11□□□□□ -0.47
SNRNP40-203ENST00000463988 SBK2P0C263 348 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms