RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 EPYCQ99645 322 aa3.15□□□□□ -1.91
SCFD1-204ENST00000463622 FNDC11Q9BVV2 318 aa3.15□□□□□ -1.91
SCFD1-204ENST00000463622 OSBPL10Q9BXB5 764 aa3.15□□□□□ -1.91
SCFD1-204ENST00000463622 REG4Q9BYZ8 158 aa3.15□□□□□ -1.91
SCFD1-204ENST00000463622 DCLRE1BQ9H816 532 aa3.15□□□□□ -1.91
SCFD1-204ENST00000463622 REEP1Q9H902 201 aa3.15□□□□□ -1.91
SCFD1-204ENST00000463622 CALHM2Q9HA72 323 aa3.15□□□□□ -1.91
SCFD1-204ENST00000463622 TMEM27Q9HBJ8 222 aa3.15□□□□□ -1.91
SCFD1-204ENST00000463622 QPCTLQ9NXS2 382 aa3.15□□□□□ -1.91
SCFD1-204ENST00000463622 KLHL28Q9NXS3 571 aa3.15□□□□□ -1.91
SCFD1-204ENST00000463622 B3GAT1Q9P2W7 334 aa3.15□□□□□ -1.91
SCFD1-204ENST00000463622 DKKL1Q9UK85 242 aa3.15□□□□□ -1.91
SCFD1-204ENST00000463622 SLC13A4Q9UKG4 626 aa3.15□□□□□ -1.91
SCFD1-204ENST00000463622 ZNF346Q9UL40 294 aaKnown RBP3.15□□□□□ -1.91
SCFD1-204ENST00000463622 UBE2J1Q9Y385 318 aaPredicted RBP3.15□□□□□ -1.91
SCFD1-204ENST00000463622 CUBNO60494 3623 aa3.14□□□□□ -1.91
SCFD1-204ENST00000463622 PHF3Q92576 2039 aaKnown RBP3.14□□□□□ -1.91
SCFD1-204ENST00000463622 RPS10-NUDT3A0A1W2PQS6 291 aa3.14□□□□□ -1.91
SCFD1-204ENST00000463622 LIPT2A6NK58 231 aa3.14□□□□□ -1.91
SCFD1-204ENST00000463622 A8MXE2 369 aa3.14□□□□□ -1.91
SCFD1-204ENST00000463622 MCIDASD6RGH6 385 aa3.14□□□□□ -1.91
SCFD1-204ENST00000463622 G3V2T6 193 aa3.14□□□□□ -1.91
SCFD1-204ENST00000463622 H3BNH8 94 aa3.14□□□□□ -1.91
SCFD1-204ENST00000463622 SMAD9O15198 467 aaKnown RBP3.14□□□□□ -1.91
SCFD1-204ENST00000463622 CXCL13O43927 109 aa3.14□□□□□ -1.91
SCFD1-204ENST00000463622 OR10H3O60404 316 aa3.14□□□□□ -1.91
SCFD1-204ENST00000463622 E2F6O75461 281 aa3.14□□□□□ -1.91
SCFD1-204ENST00000463622 OR7A10O76100 309 aa3.14□□□□□ -1.91
SCFD1-204ENST00000463622 AQP8O94778 261 aa3.14□□□□□ -1.91
SCFD1-204ENST00000463622 CCNB2O95067 398 aa3.14□□□□□ -1.91
SCFD1-204ENST00000463622 AKR7A3O95154 331 aa3.14□□□□□ -1.91
SCFD1-204ENST00000463622 SLC2A10O95528 541 aa3.14□□□□□ -1.91
SCFD1-204ENST00000463622 STAMBPO95630 424 aa3.14□□□□□ -1.91
SCFD1-204ENST00000463622 ADRA2AP08913 450 aa3.14□□□□□ -1.91
SCFD1-204ENST00000463622 GNAO1P09471 354 aa3.14□□□□□ -1.91
SCFD1-204ENST00000463622 ASAH2BP0C7U1 165 aa3.14□□□□□ -1.91
SCFD1-204ENST00000463622 PNMTP11086 282 aa3.14□□□□□ -1.91
SCFD1-204ENST00000463622 ZNF708P17019 499 aa3.14□□□□□ -1.91
SCFD1-204ENST00000463622 GRPRP30550 384 aa3.14□□□□□ -1.91
SCFD1-204ENST00000463622 AQP2P41181 271 aa3.14□□□□□ -1.91
SCFD1-204ENST00000463622 ZNF41P51814 821 aaPredicted RBP3.14□□□□□ -1.91
SCFD1-204ENST00000463622 POLR2HP52434 150 aaKnown RBP3.14□□□□□ -1.91
SCFD1-204ENST00000463622 CTBP2P56545 445 aa3.14□□□□□ -1.91
SCFD1-204ENST00000463622 SRYQ05066 204 aa3.14□□□□□ -1.91
SCFD1-204ENST00000463622 PRKCDQ05655 676 aa3.14□□□□□ -1.91
SCFD1-204ENST00000463622 LGALS3BPQ08380 585 aa3.14□□□□□ -1.91
SCFD1-204ENST00000463622 SF3B4Q15427 424 aaKnown RBP eCLIP3.14□□□□□ -1.912e-7■■■□□ 18
SCFD1-204ENST00000463622 OR7A5Q15622 319 aa3.14□□□□□ -1.91
SCFD1-204ENST00000463622 TMEM176BQ3YBM2 270 aaPredicted RBP3.14□□□□□ -1.91
SCFD1-204ENST00000463622 SYT14P1Q58G82 188 aa3.14□□□□□ -1.91
SCFD1-204ENST00000463622 NHSL2Q5HYW2 709 aa3.14□□□□□ -1.91
SCFD1-204ENST00000463622 C1orf140Q5VVS0 124 aa3.14□□□□□ -1.91
SCFD1-204ENST00000463622 KDM4DQ6B0I6 523 aa3.14□□□□□ -1.91
SCFD1-204ENST00000463622 LAIR2Q6ISS4 152 aa3.14□□□□□ -1.91
SCFD1-204ENST00000463622 ACSM5Q6NUN0 579 aa3.14□□□□□ -1.91
SCFD1-204ENST00000463622 C1orf94Q6P1W5 598 aa3.14□□□□□ -1.91
SCFD1-204ENST00000463622 ULK3Q6PHR2 472 aa3.14□□□□□ -1.91
SCFD1-204ENST00000463622 IZUMO2Q6UXV1 221 aa3.14□□□□□ -1.91
SCFD1-204ENST00000463622 ZNF730Q6ZMV8 503 aa3.14□□□□□ -1.91
SCFD1-204ENST00000463622 DNM1P46Q6ZS02 220 aa3.14□□□□□ -1.91
SCFD1-204ENST00000463622 ZNF440Q8IYI8 595 aa3.14□□□□□ -1.91
SCFD1-204ENST00000463622 TMEM99Q8N816 258 aa3.14□□□□□ -1.91
SCFD1-204ENST00000463622 OR51A7Q8NH64 312 aa3.14□□□□□ -1.91
SCFD1-204ENST00000463622 MAGEE2Q8TD90 523 aaPredicted RBP3.14□□□□□ -1.91
SCFD1-204ENST00000463622 GIPC3Q8TF64 312 aa3.14□□□□□ -1.91
SCFD1-204ENST00000463622 ZNRF4Q8WWF5 429 aa3.14□□□□□ -1.91
SCFD1-204ENST00000463622 ACOT11Q8WXI4 607 aaPredicted RBP3.14□□□□□ -1.91
SCFD1-204ENST00000463622 ST8SIA1Q92185 356 aa3.14□□□□□ -1.91
SCFD1-204ENST00000463622 HTRA1Q92743 480 aa3.14□□□□□ -1.91
SCFD1-204ENST00000463622 ADAD1Q96M93 576 aaKnown RBP3.14□□□□□ -1.91
SCFD1-204ENST00000463622 SFXN2Q96NB2 322 aa3.14□□□□□ -1.91
SCFD1-204ENST00000463622 WFIKKN1Q96NZ8 548 aa3.14□□□□□ -1.91
SCFD1-204ENST00000463622 OR5B2Q96R09 309 aa3.14□□□□□ -1.91
SCFD1-204ENST00000463622 TNFRSF13CQ96RJ3 184 aa3.14□□□□□ -1.91
SCFD1-204ENST00000463622 CCL19Q99731 98 aa3.14□□□□□ -1.91
SCFD1-204ENST00000463622 RHNO1Q9BSD3 238 aa3.14□□□□□ -1.91
SCFD1-204ENST00000463622 RBM24Q9BX46 236 aaKnown RBP3.14□□□□□ -1.91
SCFD1-204ENST00000463622 MAP6D1Q9H9H5 199 aa3.14□□□□□ -1.91
SCFD1-204ENST00000463622 CACYBPQ9HB71 228 aaKnown RBP3.14□□□□□ -1.91
SCFD1-204ENST00000463622 YAE1D1Q9NRH1 226 aa3.14□□□□□ -1.91
SCFD1-204ENST00000463622 C6orf203Q9P0P8 240 aaPredicted RBP3.14□□□□□ -1.91
SCFD1-204ENST00000463622 CHRNA9Q9UGM1 479 aa3.14□□□□□ -1.91
SCFD1-204ENST00000463622 NDRG3Q9UGV2 375 aa3.14□□□□□ -1.91
SCFD1-204ENST00000463622 BOKQ9UMX3 212 aaPredicted RBP3.14□□□□□ -1.91
SCFD1-204ENST00000463622 ADAM18Q9Y3Q7 739 aa3.14□□□□□ -1.91
SCFD1-204ENST00000463622 FAM32AQ9Y421 112 aaKnown RBP3.14□□□□□ -1.91
SCFD1-204ENST00000463622 USF3Q68DE3 2245 aa3.14□□□□□ -1.91
SCFD1-204ENST00000463622 TRAV36DV7A0A075B6V5 113 aa3.13□□□□□ -1.91
SCFD1-204ENST00000463622 IGKV1D-43A0A0B4J1Z2 117 aa3.13□□□□□ -1.91
SCFD1-204ENST00000463622 A8MV72 311 aaPredicted RBP3.13□□□□□ -1.91
SCFD1-204ENST00000463622 MS4A18H0YCH9 400 aa3.13□□□□□ -1.91
SCFD1-204ENST00000463622 H7C1C5 153 aa3.13□□□□□ -1.91
SCFD1-204ENST00000463622 GNGT2O14610 69 aa3.13□□□□□ -1.91
SCFD1-204ENST00000463622 ADAMDEC1O15204 470 aa3.13□□□□□ -1.91
SCFD1-204ENST00000463622 SPRY1O43609 319 aaPredicted RBP3.13□□□□□ -1.91
SCFD1-204ENST00000463622 PTP4A3O75365 173 aa3.13□□□□□ -1.91
SCFD1-204ENST00000463622 RCBTB2O95199 551 aa3.13□□□□□ -1.91
SCFD1-204ENST00000463622 PPP1R3DO95685 299 aa3.13□□□□□ -1.91
SCFD1-204ENST00000463622 TGM6O95932 706 aa3.13□□□□□ -1.91
SCFD1-204ENST00000463622 PLGP00747 810 aaPredicted RBP3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 142.2 ms