RNA–Protein interactions for RNA: ENST00000463097.1

COPS3-205, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 288 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-205ENST00000463097 ATP7AQ04656 1500 aa4.3□□□□□ -1.72
COPS3-205ENST00000463097 EDC4Q6P2E9 1401 aaKnown RBP4.29□□□□□ -1.72
COPS3-205ENST00000463097 ANKARQ7Z5J8 1434 aa4.29□□□□□ -1.72
COPS3-205ENST00000463097 SETD1AO15047 1707 aaKnown RBP4.29□□□□□ -1.72
COPS3-205ENST00000463097 IGKV1D-13A0A0B4J2D9 117 aa4.29□□□□□ -1.72
COPS3-205ENST00000463097 XRCC2O43543 280 aa4.29□□□□□ -1.72
COPS3-205ENST00000463097 ETHE1O95571 254 aa4.29□□□□□ -1.72
COPS3-205ENST00000463097 IGKV1-13P0DP09 117 aa4.29□□□□□ -1.72
COPS3-205ENST00000463097 CCNOP22674 350 aa4.29□□□□□ -1.72
COPS3-205ENST00000463097 COX7A1P24310 79 aa4.29□□□□□ -1.72
COPS3-205ENST00000463097 RFC3P40938 356 aa4.29□□□□□ -1.72
COPS3-205ENST00000463097 TAS2R19P59542 299 aa4.29□□□□□ -1.72
COPS3-205ENST00000463097 KRTAP10-11P60412 298 aa4.29□□□□□ -1.72
COPS3-205ENST00000463097 VSNL1P62760 191 aa4.29□□□□□ -1.72
COPS3-205ENST00000463097 TSC22D1Q15714 1073 aa4.29□□□□□ -1.72
COPS3-205ENST00000463097 SNCBQ16143 134 aa4.29□□□□□ -1.72
COPS3-205ENST00000463097 GABRA6Q16445 453 aa4.29□□□□□ -1.72
COPS3-205ENST00000463097 HIGD2BQ4VC39 106 aa4.29□□□□□ -1.72
COPS3-205ENST00000463097 CEP85LQ5SZL2 805 aa4.29□□□□□ -1.72
COPS3-205ENST00000463097 ATAD3CQ5T2N8 411 aa4.29□□□□□ -1.72
COPS3-205ENST00000463097 LCE1AQ5T7P2 110 aa4.29□□□□□ -1.72
COPS3-205ENST00000463097 MARC1Q5VT66 337 aa4.29□□□□□ -1.72
COPS3-205ENST00000463097 AP1ARQ63HQ0 302 aa4.29□□□□□ -1.72
COPS3-205ENST00000463097 PEX26Q7Z412 305 aa4.29□□□□□ -1.72
COPS3-205ENST00000463097 THOC6Q86W42 341 aaKnown RBP4.29□□□□□ -1.72
COPS3-205ENST00000463097 ST13P4Q8IZP2 240 aaPredicted RBP4.29□□□□□ -1.72
COPS3-205ENST00000463097 SYCE1Q8N0S2 351 aa4.29□□□□□ -1.72
COPS3-205ENST00000463097 MMGT1Q8N4V1 131 aa4.29□□□□□ -1.72
COPS3-205ENST00000463097 ZNF740Q8NDX6 193 aa4.29□□□□□ -1.72
COPS3-205ENST00000463097 SDR42E1Q8WUS8 393 aa4.29□□□□□ -1.72
COPS3-205ENST00000463097 ARPC1AQ92747 370 aa4.29□□□□□ -1.72
COPS3-205ENST00000463097 FAM131CQ96AQ9 280 aa4.29□□□□□ -1.72
COPS3-205ENST00000463097 EEF1AKMT3Q96AZ1 226 aa4.29□□□□□ -1.72
COPS3-205ENST00000463097 ZBED3Q96IU2 234 aaPredicted RBP4.29□□□□□ -1.72
COPS3-205ENST00000463097 DNAJC1Q96KC8 554 aaKnown RBP4.29□□□□□ -1.72
COPS3-205ENST00000463097 TMEM38AQ9H6F2 299 aa4.29□□□□□ -1.72
COPS3-205ENST00000463097 EML4Q9HC35 981 aaKnown RBP4.29□□□□□ -1.72
COPS3-205ENST00000463097 CD209Q9NNX6 404 aa4.29□□□□□ -1.72
COPS3-205ENST00000463097 DMAP1Q9NPF5 467 aaPredicted RBP4.29□□□□□ -1.72
COPS3-205ENST00000463097 CTPS2Q9NRF8 586 aa4.29□□□□□ -1.72
COPS3-205ENST00000463097 CLN6Q9NWW5 311 aa4.29□□□□□ -1.72
COPS3-205ENST00000463097 MARCH5Q9NX47 278 aa4.29□□□□□ -1.72
COPS3-205ENST00000463097 CLCF1Q9UBD9 225 aa4.29□□□□□ -1.72
COPS3-205ENST00000463097 ABCC6O95255 1503 aa4.29□□□□□ -1.72
COPS3-205ENST00000463097 PPLO60437 1756 aa4.29□□□□□ -1.72
COPS3-205ENST00000463097 PIK3C2BO00750 1634 aa4.28□□□□□ -1.72
COPS3-205ENST00000463097 COL22A1Q8NFW1 1626 aaPredicted RBP4.28□□□□□ -1.72
COPS3-205ENST00000463097 MED23Q9ULK4 1368 aa4.28□□□□□ -1.72
COPS3-205ENST00000463097 MAP3K19Q56UN5 1328 aa4.28□□□□□ -1.72
COPS3-205ENST00000463097 A0A0G2JLM5 398 aa4.28□□□□□ -1.72
COPS3-205ENST00000463097 ERICH2A1L162 156 aa4.28□□□□□ -1.72
COPS3-205ENST00000463097 SLC22A20A6NK97 555 aa4.28□□□□□ -1.72
COPS3-205ENST00000463097 CENPXA8MT69 81 aa4.28□□□□□ -1.72
COPS3-205ENST00000463097 SMKR1H3BMG3 65 aa4.28□□□□□ -1.72
COPS3-205ENST00000463097 PLPP1O14494 284 aa4.28□□□□□ -1.72
COPS3-205ENST00000463097 SLC19A2O60779 497 aa4.28□□□□□ -1.72
COPS3-205ENST00000463097 FKBP6O75344 327 aa4.28□□□□□ -1.72
COPS3-205ENST00000463097 CT45A6P0DMU7 189 aa4.28□□□□□ -1.72
COPS3-205ENST00000463097 CT45A5P0DMU8 189 aa4.28□□□□□ -1.72
COPS3-205ENST00000463097 CT45A7P0DMV0 189 aa4.28□□□□□ -1.72
COPS3-205ENST00000463097 SHC1P29353 583 aa4.28□□□□□ -1.72
COPS3-205ENST00000463097 LCN1P31025 176 aa4.28□□□□□ -1.72
COPS3-205ENST00000463097 SERPINB5P36952 375 aa4.28□□□□□ -1.72
COPS3-205ENST00000463097 MEOX2P50222 304 aa4.28□□□□□ -1.72
COPS3-205ENST00000463097 ATP6V0D1P61421 351 aa4.28□□□□□ -1.72
COPS3-205ENST00000463097 ZNF45Q02386 682 aa4.28□□□□□ -1.72
COPS3-205ENST00000463097 XRCC4Q13426 336 aa4.28□□□□□ -1.72
COPS3-205ENST00000463097 CLINT1Q14677 625 aa4.28□□□□□ -1.72
COPS3-205ENST00000463097 KCTD19Q17RG1 926 aaPredicted RBP4.28□□□□□ -1.72
COPS3-205ENST00000463097 KRT71Q3SY84 523 aa4.28□□□□□ -1.72
COPS3-205ENST00000463097 CT45A1Q5HYN5 189 aa4.28□□□□□ -1.72
COPS3-205ENST00000463097 FAM173BQ6P4H8 233 aa4.28□□□□□ -1.72
COPS3-205ENST00000463097 PAMR1Q6UXH9 720 aa4.28□□□□□ -1.72
COPS3-205ENST00000463097 TMEM150AQ86TG1 271 aa4.28□□□□□ -1.72
COPS3-205ENST00000463097 KRTAP7-1Q8IUC3 87 aa4.28□□□□□ -1.72
COPS3-205ENST00000463097 ZNF547Q8IVP9 402 aa4.28□□□□□ -1.72
COPS3-205ENST00000463097 MREGQ8N565 214 aa4.28□□□□□ -1.72
COPS3-205ENST00000463097 OR2L2Q8NH16 312 aa4.28□□□□□ -1.72
COPS3-205ENST00000463097 CT45A3Q8NHU0 189 aa4.28□□□□□ -1.72
COPS3-205ENST00000463097 RHOXF1Q8NHV9 184 aa4.28□□□□□ -1.72
COPS3-205ENST00000463097 FCRL1Q96LA6 429 aa4.28□□□□□ -1.72
COPS3-205ENST00000463097 SERPINB12Q96P63 405 aa4.28□□□□□ -1.72
COPS3-205ENST00000463097 KCNS3Q9BQ31 491 aa4.28□□□□□ -1.72
COPS3-205ENST00000463097 NICN1Q9BSH3 213 aa4.28□□□□□ -1.72
COPS3-205ENST00000463097 CHID1Q9BWS9 393 aa4.28□□□□□ -1.72
COPS3-205ENST00000463097 PRRG3Q9BZD7 231 aa4.28□□□□□ -1.72
COPS3-205ENST00000463097 NAA50Q9GZZ1 169 aaKnown RBP4.28□□□□□ -1.72
COPS3-205ENST00000463097 SRMSQ9H3Y6 488 aa4.28□□□□□ -1.72
COPS3-205ENST00000463097 PLGRKTQ9HBL7 147 aa4.28□□□□□ -1.72
COPS3-205ENST00000463097 TREM1Q9NP99 234 aa4.28□□□□□ -1.72
COPS3-205ENST00000463097 SLC25A15Q9Y619 301 aa4.28□□□□□ -1.72
COPS3-205ENST00000463097 ITSN1Q15811 1721 aa4.28□□□□□ -1.72
COPS3-205ENST00000463097 TDRD15B5MCY1 1934 aaKnown RBP4.28□□□□□ -1.72
COPS3-205ENST00000463097 PREX1Q8TCU6 1659 aa4.28□□□□□ -1.72
COPS3-205ENST00000463097 DIP2AQ14689 1571 aa4.27□□□□□ -1.73
COPS3-205ENST00000463097 CEP170BQ9Y4F5 1589 aaPredicted RBP4.27□□□□□ -1.73
COPS3-205ENST00000463097 N4BP2Q86UW6 1770 aaPredicted RBP4.27□□□□□ -1.73
COPS3-205ENST00000463097 ARHGEF28Q8N1W1 1705 aaKnown RBP4.27□□□□□ -1.73
COPS3-205ENST00000463097 PTPRMP28827 1452 aa4.27□□□□□ -1.73
COPS3-205ENST00000463097 A0A1B0GVI7 797 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms