RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 ZNF679Q8IYX0 411 aa12.51□□□□□ -0.41
COL6A1-202ENST00000463060 STEAP2Q8NFT2 490 aa12.51□□□□□ -0.41
COL6A1-202ENST00000463060 OR2AJ1Q8NGZ0 328 aa12.51□□□□□ -0.41
COL6A1-202ENST00000463060 SLAMF6Q96DU3 332 aa12.51□□□□□ -0.41
COL6A1-202ENST00000463060 USB1Q9BQ65 265 aaKnown RBP12.51□□□□□ -0.41
COL6A1-202ENST00000463060 ALG8Q9BVK2 526 aa12.51□□□□□ -0.41
COL6A1-202ENST00000463060 CCDC90BQ9GZT6 254 aa12.51□□□□□ -0.41
COL6A1-202ENST00000463060 ISG20L2Q9H9L3 353 aaKnown RBP12.51□□□□□ -0.41
COL6A1-202ENST00000463060 OBP2BQ9NPH6 170 aa12.51□□□□□ -0.41
COL6A1-202ENST00000463060 DDX28Q9NUL7 540 aaKnown RBP12.51□□□□□ -0.41
COL6A1-202ENST00000463060 ERGIC3Q9Y282 383 aa12.51□□□□□ -0.41
COL6A1-202ENST00000463060 SLC25A15Q9Y619 301 aa12.51□□□□□ -0.41
COL6A1-202ENST00000463060 RTTNQ86VV8 2226 aa12.5□□□□□ -0.41
COL6A1-202ENST00000463060 METTL15A6NJ78 407 aa12.5□□□□□ -0.41
COL6A1-202ENST00000463060 C16orf97H3BN30 126 aa12.5□□□□□ -0.41
COL6A1-202ENST00000463060 SGCEO43556 437 aa12.5□□□□□ -0.41
COL6A1-202ENST00000463060 ZNF254O75437 659 aa12.5□□□□□ -0.41
COL6A1-202ENST00000463060 UBL3O95164 117 aa12.5□□□□□ -0.41
COL6A1-202ENST00000463060 JUNBP17275 347 aaPredicted RBP12.5□□□□□ -0.41
COL6A1-202ENST00000463060 ARR3P36575 388 aa12.5□□□□□ -0.41
COL6A1-202ENST00000463060 SCRN3Q0VDG4 424 aa12.5□□□□□ -0.41
COL6A1-202ENST00000463060 PABPC1L2AQ5JQF8 200 aa12.5□□□□□ -0.41
COL6A1-202ENST00000463060 ELFN2Q5R3F8 820 aa12.5□□□□□ -0.41
COL6A1-202ENST00000463060 UBE2UQ5VVX9 321 aa12.5□□□□□ -0.41
COL6A1-202ENST00000463060 KCTD18Q6PI47 426 aaPredicted RBP12.5□□□□□ -0.41
COL6A1-202ENST00000463060 SEZ6L2Q6UXD5 910 aa12.5□□□□□ -0.41
COL6A1-202ENST00000463060 PLEKHG7Q6ZR37 379 aa12.5□□□□□ -0.41
COL6A1-202ENST00000463060 ZNF584Q8IVC4 421 aa12.5□□□□□ -0.41
COL6A1-202ENST00000463060 ZNF808Q8N4W9 903 aaPredicted RBP12.5□□□□□ -0.41
COL6A1-202ENST00000463060 FAM169BQ8N8A8 192 aa12.5□□□□□ -0.41
COL6A1-202ENST00000463060 CPEB3Q8NE35 698 aaKnown RBP12.5□□□□□ -0.41
COL6A1-202ENST00000463060 RNASE6Q93091 150 aaKnown RBP12.5□□□□□ -0.41
COL6A1-202ENST00000463060 S100PBPQ96BU1 408 aa12.5□□□□□ -0.41
COL6A1-202ENST00000463060 PELI1Q96FA3 418 aa12.5□□□□□ -0.41
COL6A1-202ENST00000463060 OR5M11Q96RB7 305 aa12.5□□□□□ -0.41
COL6A1-202ENST00000463060 KCNN2Q9H2S1 579 aa12.5□□□□□ -0.41
COL6A1-202ENST00000463060 ELOVL3Q9HB03 270 aa12.5□□□□□ -0.41
COL6A1-202ENST00000463060 ATPIF1Q9UII2 106 aa12.5□□□□□ -0.41
COL6A1-202ENST00000463060 POLR1DQ9Y2S0 133 aa12.5□□□□□ -0.41
COL6A1-202ENST00000463060 SNX5Q9Y5X3 404 aa12.5□□□□□ -0.41
COL6A1-202ENST00000463060 UBR5O95071 2799 aaPredicted RBP12.49□□□□□ -0.41
COL6A1-202ENST00000463060 PRR14LQ5THK1 2151 aa12.49□□□□□ -0.41
COL6A1-202ENST00000463060 NKX2-6A6NCS4 301 aa12.49□□□□□ -0.41
COL6A1-202ENST00000463060 SRSF10O75494 262 aaKnown RBP12.49□□□□□ -0.41
COL6A1-202ENST00000463060 LALBAP00709 142 aa12.49□□□□□ -0.41
COL6A1-202ENST00000463060 TFAP2AP05549 437 aa12.49□□□□□ -0.41
COL6A1-202ENST00000463060 COX5BP10606 129 aa12.49□□□□□ -0.41
COL6A1-202ENST00000463060 CD79AP11912 226 aa12.49□□□□□ -0.41
COL6A1-202ENST00000463060 CBR1P16152 277 aa12.49□□□□□ -0.41
COL6A1-202ENST00000463060 ZNF14P17017 642 aaPredicted RBP12.49□□□□□ -0.41
COL6A1-202ENST00000463060 CRYGSP22914 178 aa12.49□□□□□ -0.41
COL6A1-202ENST00000463060 IL32P24001 234 aa12.49□□□□□ -0.41
COL6A1-202ENST00000463060 DCTDP32321 178 aa12.49□□□□□ -0.41
COL6A1-202ENST00000463060 WNT4P56705 351 aa12.49□□□□□ -0.41
COL6A1-202ENST00000463060 ACTA2P62736 377 aa12.49□□□□□ -0.41
COL6A1-202ENST00000463060 ACTG2P63267 376 aa12.49□□□□□ -0.41
COL6A1-202ENST00000463060 TUBA1BP68363 451 aa12.49□□□□□ -0.41
COL6A1-202ENST00000463060 SRSF1Q07955 248 aaKnown RBP eCLIP12.49□□□□□ -0.41
COL6A1-202ENST00000463060 ACSM1Q08AH1 577 aa12.49□□□□□ -0.41
COL6A1-202ENST00000463060 RAB35Q15286 201 aa12.49□□□□□ -0.41
COL6A1-202ENST00000463060 GSG1Q2KHT4 349 aa12.49□□□□□ -0.41
COL6A1-202ENST00000463060 TP53I3Q53FA7 332 aa12.49□□□□□ -0.41
COL6A1-202ENST00000463060 ZNF774Q6NX45 483 aa12.49□□□□□ -0.41
COL6A1-202ENST00000463060 TMEM154Q6P9G4 183 aa12.49□□□□□ -0.41
COL6A1-202ENST00000463060 LRRN1Q6UXK5 716 aa12.49□□□□□ -0.41
COL6A1-202ENST00000463060 KCTD8Q6ZWB6 473 aa12.49□□□□□ -0.41
COL6A1-202ENST00000463060 TUBA1AQ71U36 451 aa12.49□□□□□ -0.41
COL6A1-202ENST00000463060 MDP1Q86V88 176 aa12.49□□□□□ -0.41
COL6A1-202ENST00000463060 KLHL36Q8N4N3 616 aa12.49□□□□□ -0.41
COL6A1-202ENST00000463060 SVOPQ8N4V2 548 aa12.49□□□□□ -0.41
COL6A1-202ENST00000463060 AKR7LQ8NHP1 331 aa12.49□□□□□ -0.41
COL6A1-202ENST00000463060 CA5BP1Q8WTZ4 195 aa12.49□□□□□ -0.41
COL6A1-202ENST00000463060 SNX33Q8WV41 574 aa12.49□□□□□ -0.41
COL6A1-202ENST00000463060 SPRYD4Q8WW59 207 aaPredicted RBP12.49□□□□□ -0.41
COL6A1-202ENST00000463060 C4orf36Q96KX1 117 aa12.49□□□□□ -0.41
COL6A1-202ENST00000463060 COQ7Q99807 217 aa12.49□□□□□ -0.41
COL6A1-202ENST00000463060 MND1Q9BWT6 205 aa12.49□□□□□ -0.41
COL6A1-202ENST00000463060 MRPS26Q9BYN8 205 aaKnown RBP12.49□□□□□ -0.41
COL6A1-202ENST00000463060 TTTY10Q9BZA0 68 aa12.49□□□□□ -0.41
COL6A1-202ENST00000463060 HDHD2Q9H0R4 259 aa12.49□□□□□ -0.41
COL6A1-202ENST00000463060 ISYNA1Q9NPH2 558 aa12.49□□□□□ -0.41
COL6A1-202ENST00000463060 KCNJ16Q9NPI9 418 aa12.49□□□□□ -0.41
COL6A1-202ENST00000463060 CHCHD3Q9NX63 227 aaKnown RBP12.49□□□□□ -0.41
COL6A1-202ENST00000463060 BABAM2Q9NXR7 383 aa12.49□□□□□ -0.41
COL6A1-202ENST00000463060 CRNNQ9UBG3 495 aaPredicted RBP12.49□□□□□ -0.41
COL6A1-202ENST00000463060 AMDHD2Q9Y303 409 aa12.49□□□□□ -0.41
COL6A1-202ENST00000463060 LRP12Q9Y561 859 aa12.49□□□□□ -0.41
COL6A1-202ENST00000463060 LOC100509620A0A075B734 347 aa12.48□□□□□ -0.41
COL6A1-202ENST00000463060 A0A1W2PR80 420 aa12.48□□□□□ -0.41
COL6A1-202ENST00000463060 FAM90A27PA6NNH2 459 aa12.48□□□□□ -0.41
COL6A1-202ENST00000463060 ZNF878C9JN71 531 aa12.48□□□□□ -0.41
COL6A1-202ENST00000463060 E9PI62 339 aa12.48□□□□□ -0.41
COL6A1-202ENST00000463060 J3QLW9 94 aa12.48□□□□□ -0.41
COL6A1-202ENST00000463060 PSMD9O00233 223 aa12.48□□□□□ -0.41
COL6A1-202ENST00000463060 IGKV3-15P01624 115 aa12.48□□□□□ -0.41
COL6A1-202ENST00000463060 IGLV1-44P01699 117 aa12.48□□□□□ -0.41
COL6A1-202ENST00000463060 MT-ND5P03915 603 aa12.48□□□□□ -0.41
COL6A1-202ENST00000463060 SERPINA5P05154 406 aa12.48□□□□□ -0.41
COL6A1-202ENST00000463060 LCKP06239 509 aa12.48□□□□□ -0.41
COL6A1-202ENST00000463060 ATP6V1B1P15313 513 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms