RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 PSG4Q00888 419 aa6.75□□□□□ -1.33
CDC42BPA-210ENST00000462553 FLOT2Q14254 428 aa6.75□□□□□ -1.33
CDC42BPA-210ENST00000462553 SGCAQ16586 387 aa6.75□□□□□ -1.33
CDC42BPA-210ENST00000462553 MICAQ29983 383 aa6.75□□□□□ -1.33
CDC42BPA-210ENST00000462553 FAM98BQ52LJ0 330 aaKnown RBP6.75□□□□□ -1.33
CDC42BPA-210ENST00000462553 PABPC1L2AQ5JQF8 200 aa6.75□□□□□ -1.33
CDC42BPA-210ENST00000462553 TMEM255AQ5JRV8 349 aa6.75□□□□□ -1.33
CDC42BPA-210ENST00000462553 FAM27BQ5VT28 67 aa6.75□□□□□ -1.33
CDC42BPA-210ENST00000462553 OTPQ5XKR4 325 aa6.75□□□□□ -1.33
CDC42BPA-210ENST00000462553 RASSF6Q6ZTQ3 369 aa6.75□□□□□ -1.33
CDC42BPA-210ENST00000462553 DPPA2Q7Z7J5 298 aa6.75□□□□□ -1.33
CDC42BPA-210ENST00000462553 ADCK1Q86TW2 530 aa6.75□□□□□ -1.33
CDC42BPA-210ENST00000462553 AQP11Q8NBQ7 271 aa6.75□□□□□ -1.33
CDC42BPA-210ENST00000462553 PAPD5Q8NDF8 572 aaKnown RBP6.75□□□□□ -1.33
CDC42BPA-210ENST00000462553 CPEB3Q8NE35 698 aaKnown RBP6.75□□□□□ -1.33
CDC42BPA-210ENST00000462553 SLC30A7Q8NEW0 376 aa6.75□□□□□ -1.33
CDC42BPA-210ENST00000462553 IL17RDQ8NFM7 739 aa6.75□□□□□ -1.33
CDC42BPA-210ENST00000462553 RDH5Q92781 318 aa6.75□□□□□ -1.33
CDC42BPA-210ENST00000462553 POP5Q969H6 163 aaKnown RBP6.75□□□□□ -1.33
CDC42BPA-210ENST00000462553 LRGUKQ96M69 825 aa6.75□□□□□ -1.33
CDC42BPA-210ENST00000462553 TSSK2Q96PF2 358 aa6.75□□□□□ -1.33
CDC42BPA-210ENST00000462553 RBP7Q96R05 134 aa6.75□□□□□ -1.33
CDC42BPA-210ENST00000462553 DDOQ99489 341 aa6.75□□□□□ -1.33
CDC42BPA-210ENST00000462553 ZNF416Q9BWM5 594 aa6.75□□□□□ -1.33
CDC42BPA-210ENST00000462553 CHID1Q9BWS9 393 aa6.75□□□□□ -1.33
CDC42BPA-210ENST00000462553 DGCR6LQ9BY27 220 aa6.75□□□□□ -1.33
CDC42BPA-210ENST00000462553 NDEL1Q9GZM8 345 aa6.75□□□□□ -1.33
CDC42BPA-210ENST00000462553 SYT4Q9H2B2 425 aa6.75□□□□□ -1.33
CDC42BPA-210ENST00000462553 EMC7Q9NPA0 242 aa6.75□□□□□ -1.33
CDC42BPA-210ENST00000462553 TREM2Q9NZC2 230 aa6.75□□□□□ -1.33
CDC42BPA-210ENST00000462553 REV1Q9UBZ9 1251 aa6.75□□□□□ -1.33
CDC42BPA-210ENST00000462553 FBXL3Q9UKT7 428 aa6.75□□□□□ -1.33
CDC42BPA-210ENST00000462553 TMCC3Q9ULS5 477 aa6.75□□□□□ -1.33
CDC42BPA-210ENST00000462553 SAMHD1Q9Y3Z3 626 aaKnown RBP6.75□□□□□ -1.33
CDC42BPA-210ENST00000462553 U3KQV3 271 aa6.75□□□□□ -1.33
CDC42BPA-210ENST00000462553 LOC105371242A0A075B767 164 aa6.74□□□□□ -1.33
CDC42BPA-210ENST00000462553 A0A1W2PPL8 197 aa6.74□□□□□ -1.33
CDC42BPA-210ENST00000462553 VSTM5A8MXK1 200 aa6.74□□□□□ -1.33
CDC42BPA-210ENST00000462553 XKRYO14609 159 aa6.74□□□□□ -1.33
CDC42BPA-210ENST00000462553 SLC16A7O60669 478 aa6.74□□□□□ -1.33
CDC42BPA-210ENST00000462553 FKBP6O75344 327 aa6.74□□□□□ -1.33
CDC42BPA-210ENST00000462553 DEAF1O75398 565 aaPredicted RBP6.74□□□□□ -1.33
CDC42BPA-210ENST00000462553 MPZL1O95297 269 aa6.74□□□□□ -1.33
CDC42BPA-210ENST00000462553 SOX14O95416 240 aa6.74□□□□□ -1.33
CDC42BPA-210ENST00000462553 PNPP00491 289 aa6.74□□□□□ -1.33
CDC42BPA-210ENST00000462553 NAT2P11245 290 aa6.74□□□□□ -1.33
CDC42BPA-210ENST00000462553 EPHA1P21709 976 aa6.74□□□□□ -1.33
CDC42BPA-210ENST00000462553 IFNGR2P38484 337 aa6.74□□□□□ -1.33
CDC42BPA-210ENST00000462553 MAGEB1P43366 347 aa6.74□□□□□ -1.33
CDC42BPA-210ENST00000462553 ERFP50548 548 aa6.74□□□□□ -1.33
CDC42BPA-210ENST00000462553 RPS6KA3P51812 740 aa6.74□□□□□ -1.33
CDC42BPA-210ENST00000462553 ERVS71-1P61550 626 aa6.74□□□□□ -1.33
CDC42BPA-210ENST00000462553 ACTG1P63261 375 aa6.74□□□□□ -1.33
CDC42BPA-210ENST00000462553 MRPS11P82912 194 aaKnown RBP6.74□□□□□ -1.33
CDC42BPA-210ENST00000462553 SLC36A2Q495M3 483 aa6.74□□□□□ -1.33
CDC42BPA-210ENST00000462553 ZNF362Q5T0B9 420 aaPredicted RBP6.74□□□□□ -1.33
CDC42BPA-210ENST00000462553 ZNF774Q6NX45 483 aa6.74□□□□□ -1.33
CDC42BPA-210ENST00000462553 USP43Q70EL4 1123 aa6.74□□□□□ -1.33
CDC42BPA-210ENST00000462553 SPATA24Q86W54 205 aa6.74□□□□□ -1.33
CDC42BPA-210ENST00000462553 LINC00471Q8N535 108 aa6.74□□□□□ -1.33
CDC42BPA-210ENST00000462553 NPEPL1Q8NDH3 523 aa6.74□□□□□ -1.33
CDC42BPA-210ENST00000462553 SDR9C7Q8NEX9 313 aa6.74□□□□□ -1.33
CDC42BPA-210ENST00000462553 OR10G2Q8NGC3 310 aa6.74□□□□□ -1.33
CDC42BPA-210ENST00000462553 OR4Q3Q8NH05 313 aa6.74□□□□□ -1.33
CDC42BPA-210ENST00000462553 OR4K13Q8NH42 304 aa6.74□□□□□ -1.33
CDC42BPA-210ENST00000462553 OR51F2Q8NH61 342 aa6.74□□□□□ -1.33
CDC42BPA-210ENST00000462553 AKR7LQ8NHP1 331 aa6.74□□□□□ -1.33
CDC42BPA-210ENST00000462553 FAM216AQ8WUB2 273 aa6.74□□□□□ -1.33
CDC42BPA-210ENST00000462553 UTP4Q969X6 686 aaKnown RBP6.74□□□□□ -1.33
CDC42BPA-210ENST00000462553 ZMYND19Q96E35 227 aaPredicted RBP6.74□□□□□ -1.33
CDC42BPA-210ENST00000462553 POM121L2Q96KW2 1035 aa6.74□□□□□ -1.33
CDC42BPA-210ENST00000462553 ERMAPQ96PL5 475 aaPredicted RBP6.74□□□□□ -1.33
CDC42BPA-210ENST00000462553 NIPSNAP1Q9BPW8 284 aa6.74□□□□□ -1.33
CDC42BPA-210ENST00000462553 TMPRSS13Q9BYE2 586 aa6.74□□□□□ -1.33
CDC42BPA-210ENST00000462553 OR2H1Q9GZK4 316 aa6.74□□□□□ -1.33
CDC42BPA-210ENST00000462553 NUAK2Q9H093 628 aa6.74□□□□□ -1.33
CDC42BPA-210ENST00000462553 LRMDAQ9H2I8 198 aa6.74□□□□□ -1.33
CDC42BPA-210ENST00000462553 MS4A5Q9H3V2 200 aa6.74□□□□□ -1.33
CDC42BPA-210ENST00000462553 C1orf198Q9H425 327 aa6.74□□□□□ -1.33
CDC42BPA-210ENST00000462553 FN3KQ9H479 309 aa6.74□□□□□ -1.33
CDC42BPA-210ENST00000462553 REEP1Q9H902 201 aa6.74□□□□□ -1.33
CDC42BPA-210ENST00000462553 RNF121Q9H920 327 aa6.74□□□□□ -1.33
CDC42BPA-210ENST00000462553 ESM1Q9NQ30 184 aa6.74□□□□□ -1.33
CDC42BPA-210ENST00000462553 ARMC1Q9NVT9 282 aa6.74□□□□□ -1.33
CDC42BPA-210ENST00000462553 IL20Q9NYY1 176 aa6.74□□□□□ -1.33
CDC42BPA-210ENST00000462553 COA3Q9Y2R0 106 aaPredicted RBP6.74□□□□□ -1.33
CDC42BPA-210ENST00000462553 IGLV3-9A0A075B6K5 115 aa6.73□□□□□ -1.33
CDC42BPA-210ENST00000462553 TRAV20A0A0B4J274 112 aa6.73□□□□□ -1.33
CDC42BPA-210ENST00000462553 OR6C68A6NDL8 312 aa6.73□□□□□ -1.33
CDC42BPA-210ENST00000462553 ARRDC5A6NEK1 342 aa6.73□□□□□ -1.33
CDC42BPA-210ENST00000462553 PPIHO43447 177 aaKnown RBP6.73□□□□□ -1.33
CDC42BPA-210ENST00000462553 ICMTO60725 284 aa6.73□□□□□ -1.33
CDC42BPA-210ENST00000462553 KHDRBS3O75525 346 aaKnown RBP6.73□□□□□ -1.33
CDC42BPA-210ENST00000462553 CLPTM1O96005 669 aa6.73□□□□□ -1.33
CDC42BPA-210ENST00000462553 CST1P01037 141 aa6.73□□□□□ -1.33
CDC42BPA-210ENST00000462553 FSHBP01225 129 aa6.73□□□□□ -1.33
CDC42BPA-210ENST00000462553 PSKH1P11801 424 aa6.73□□□□□ -1.33
CDC42BPA-210ENST00000462553 TMEM33P57088 247 aa6.73□□□□□ -1.33
CDC42BPA-210ENST00000462553 RPS23P62266 143 aaKnown RBP6.73□□□□□ -1.33
CDC42BPA-210ENST00000462553 CBX1P83916 185 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms