RNA–Protein interactions for RNA: ENST00000462523.5

XPA-202, Transcript of XPA, DNA damage recognition and repair factor, humanhuman

TSL 5

Gene XPA, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPA-202ENST00000462523 POM121L2Q96KW2 1035 aa16.64■□□□□ 0.25
XPA-202ENST00000462523 WARS2Q9UGM6 360 aaKnown RBP16.64■□□□□ 0.25
XPA-202ENST00000462523 FBXL3Q9UKT7 428 aa16.64■□□□□ 0.25
XPA-202ENST00000462523 RAI1Q7Z5J4 1906 aaPredicted RBP16.63■□□□□ 0.25
XPA-202ENST00000462523 APOL3O95236 402 aa16.63■□□□□ 0.25
XPA-202ENST00000462523 NUDT6P53370 316 aa16.63■□□□□ 0.25
XPA-202ENST00000462523 PLP2Q04941 152 aa16.63■□□□□ 0.25
XPA-202ENST00000462523 RAB35Q15286 201 aa16.63■□□□□ 0.25
XPA-202ENST00000462523 RSPO1Q2MKA7 263 aaPredicted RBP16.63■□□□□ 0.25
XPA-202ENST00000462523 ELFN2Q5R3F8 820 aa16.63■□□□□ 0.25
XPA-202ENST00000462523 MEDAGQ5VYS4 303 aa16.63■□□□□ 0.25
XPA-202ENST00000462523 LAIR2Q6ISS4 152 aa16.63■□□□□ 0.25
XPA-202ENST00000462523 SLC16A9Q7RTY1 509 aa16.63■□□□□ 0.25
XPA-202ENST00000462523 CDC20BQ86Y33 519 aa16.63■□□□□ 0.25
XPA-202ENST00000462523 RFLNBQ8N5W9 214 aa16.63■□□□□ 0.25
XPA-202ENST00000462523 OR2AJ1Q8NGZ0 328 aa16.63■□□□□ 0.25
XPA-202ENST00000462523 OTOSQ8NHW6 89 aa16.63■□□□□ 0.25
XPA-202ENST00000462523 RFKQ969G6 155 aa16.63■□□□□ 0.25
XPA-202ENST00000462523 RASSF4Q9H2L5 321 aa16.63■□□□□ 0.25
XPA-202ENST00000462523 RNF115Q9Y4L5 304 aa16.63■□□□□ 0.25
XPA-202ENST00000462523 IQCMA0A1B0GVH7 501 aa16.62■□□□□ 0.25
XPA-202ENST00000462523 SBK2P0C263 348 aa16.62■□□□□ 0.25
XPA-202ENST00000462523 HGFACQ04756 655 aa16.62■□□□□ 0.25
XPA-202ENST00000462523 ZNF704Q6ZNC4 412 aaPredicted RBP16.62■□□□□ 0.25
XPA-202ENST00000462523 ALDH16A1Q8IZ83 802 aa16.62■□□□□ 0.25
XPA-202ENST00000462523 SETD9Q8NE22 299 aa16.62■□□□□ 0.25
XPA-202ENST00000462523 OR51G2Q8NGK0 314 aa16.62■□□□□ 0.25
XPA-202ENST00000462523 OR1F12Q8NHA8 337 aa16.62■□□□□ 0.25
XPA-202ENST00000462523 FBLIM1Q8WUP2 373 aa16.62■□□□□ 0.25
XPA-202ENST00000462523 CNN2Q99439 309 aaKnown RBP16.62■□□□□ 0.25
XPA-202ENST00000462523 ABHD6Q9BV23 337 aa16.62■□□□□ 0.25
XPA-202ENST00000462523 CLEC4MQ9H2X3 399 aaPredicted RBP16.62■□□□□ 0.25
XPA-202ENST00000462523 C1orf198Q9H425 327 aa16.62■□□□□ 0.25
XPA-202ENST00000462523 COPS3Q9UNS2 423 aa16.62■□□□□ 0.25
XPA-202ENST00000462523 ROS1P08922 2347 aa16.62■□□□□ 0.25
XPA-202ENST00000462523 PRR32B1ATL7 298 aa16.61■□□□□ 0.25
XPA-202ENST00000462523 CRYAAP02489 173 aa16.61■□□□□ 0.25
XPA-202ENST00000462523 DBHP09172 617 aa16.61■□□□□ 0.25
XPA-202ENST00000462523 COX5BP10606 129 aa16.61■□□□□ 0.25
XPA-202ENST00000462523 HTR5AP47898 357 aa16.61■□□□□ 0.25
XPA-202ENST00000462523 KRTAP10-9P60411 292 aa16.61■□□□□ 0.25
XPA-202ENST00000462523 ZNF91Q05481 1191 aa16.61■□□□□ 0.25
XPA-202ENST00000462523 EIF2B1Q14232 305 aaKnown RBP16.61■□□□□ 0.25
XPA-202ENST00000462523 KRTAP27-1Q3LI81 207 aa16.61■□□□□ 0.25
XPA-202ENST00000462523 SLC22A25Q6T423 547 aa16.61■□□□□ 0.25
XPA-202ENST00000462523 SHFQ7M4L6 423 aa16.61■□□□□ 0.25
XPA-202ENST00000462523 C8orf59Q8N0T1 100 aaPredicted RBP16.61■□□□□ 0.25
XPA-202ENST00000462523 HDHD2Q9H0R4 259 aa16.61■□□□□ 0.25
XPA-202ENST00000462523 AMBNQ9NP70 447 aa16.61■□□□□ 0.25
XPA-202ENST00000462523 DDX28Q9NUL7 540 aaKnown RBP16.61■□□□□ 0.25
XPA-202ENST00000462523 CLN6Q9NWW5 311 aa16.61■□□□□ 0.25
XPA-202ENST00000462523 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.61■□□□□ 0.25
XPA-202ENST00000462523 HSPE1-MOB4S4R3N1 261 aa16.61■□□□□ 0.25
XPA-202ENST00000462523 ABCA12Q86UK0 2595 aa16.61■□□□□ 0.25
XPA-202ENST00000462523 FLNBO75369 2602 aaKnown RBP16.6■□□□□ 0.25
XPA-202ENST00000462523 C5orf49A4QMS7 147 aa16.6■□□□□ 0.25
XPA-202ENST00000462523 TMCC2O75069 709 aa16.6■□□□□ 0.25
XPA-202ENST00000462523 PTHP01270 115 aa16.6■□□□□ 0.25
XPA-202ENST00000462523 DBTP11182 482 aaKnown RBP16.6■□□□□ 0.25
XPA-202ENST00000462523 ALOX5APP20292 161 aa16.6■□□□□ 0.25
XPA-202ENST00000462523 SSTR2P30874 369 aa16.6■□□□□ 0.25
XPA-202ENST00000462523 APLNRP35414 380 aa16.6■□□□□ 0.25
XPA-202ENST00000462523 WNT5AP41221 380 aa16.6■□□□□ 0.25
XPA-202ENST00000462523 MTNR1AP48039 350 aa16.6■□□□□ 0.25
XPA-202ENST00000462523 TMED1Q13445 227 aa16.6■□□□□ 0.25
XPA-202ENST00000462523 TBC1D28Q2M2D7 210 aa16.6■□□□□ 0.25
XPA-202ENST00000462523 TMEM200AQ86VY9 491 aa16.6■□□□□ 0.25
XPA-202ENST00000462523 IL17RDQ8NFM7 739 aa16.6■□□□□ 0.25
XPA-202ENST00000462523 OR4F15Q8NGB8 312 aa16.6■□□□□ 0.25
XPA-202ENST00000462523 SLAMF6Q96DU3 332 aa16.6■□□□□ 0.25
XPA-202ENST00000462523 RNFT2Q96EX2 444 aa16.6■□□□□ 0.25
XPA-202ENST00000462523 ANKRD60Q9BZ19 345 aa16.6■□□□□ 0.25
XPA-202ENST00000462523 YIPF3Q9GZM5 350 aa16.6■□□□□ 0.25
XPA-202ENST00000462523 PLEKHF2Q9H8W4 249 aa16.6■□□□□ 0.25
XPA-202ENST00000462523 ATPIF1Q9UII2 106 aa16.6■□□□□ 0.25
XPA-202ENST00000462523 PLCE1Q9P212 2302 aa16.6■□□□□ 0.25
XPA-202ENST00000462523 ITPR2Q14571 2701 aa16.6■□□□□ 0.25
XPA-202ENST00000462523 J3QRE1 110 aa16.6■□□□□ 0.25
XPA-202ENST00000462523 HSPA13P48723 471 aa16.6■□□□□ 0.25
XPA-202ENST00000462523 CDK5R2Q13319 367 aa16.6■□□□□ 0.25
XPA-202ENST00000462523 ZNF672Q499Z4 452 aaPredicted RBP16.6■□□□□ 0.25
XPA-202ENST00000462523 SPATC1Q76KD6 591 aa16.6■□□□□ 0.25
XPA-202ENST00000462523 SLC35F2Q8IXU6 374 aa16.6■□□□□ 0.25
XPA-202ENST00000462523 ZNF101Q8IZC7 436 aa16.6■□□□□ 0.25
XPA-202ENST00000462523 RNF133Q8WVZ7 376 aa16.6■□□□□ 0.25
XPA-202ENST00000462523 RADILQ96JH8 1075 aa16.6■□□□□ 0.25
XPA-202ENST00000462523 COQ7Q99807 217 aa16.6■□□□□ 0.25
XPA-202ENST00000462523 ATF6BQ99941 703 aa16.6■□□□□ 0.25
XPA-202ENST00000462523 E7EQL1 145 aa16.59■□□□□ 0.25
XPA-202ENST00000462523 LYNP07948 512 aa16.59■□□□□ 0.25
XPA-202ENST00000462523 CCNOP22674 350 aa16.59■□□□□ 0.25
XPA-202ENST00000462523 ANOS1P23352 680 aa16.59■□□□□ 0.25
XPA-202ENST00000462523 GDI2P50395 445 aaKnown RBP16.59■□□□□ 0.25
XPA-202ENST00000462523 NKX6-1P78426 367 aaPredicted RBP16.59■□□□□ 0.25
XPA-202ENST00000462523 KRT80Q6KB66 452 aa16.59■□□□□ 0.25
XPA-202ENST00000462523 THAP5Q7Z6K1 395 aa16.59■□□□□ 0.25
XPA-202ENST00000462523 ZNF454Q8N9F8 522 aa16.59■□□□□ 0.25
XPA-202ENST00000462523 THEM6Q8WUY1 208 aa16.59■□□□□ 0.25
XPA-202ENST00000462523 LGALS12Q96DT0 336 aa16.59■□□□□ 0.25
XPA-202ENST00000462523 Q96MT0 163 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms