RNA–Protein interactions for RNA: ENST00000461897.5

COL4A6-204, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,889 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-204ENST00000461897 KIR3DL2P43630 455 aa11.14□□□□□ -0.63
COL4A6-204ENST00000461897 HLXQ14774 488 aaPredicted RBP11.14□□□□□ -0.63
COL4A6-204ENST00000461897 HES3Q5TGS1 186 aa11.14□□□□□ -0.63
COL4A6-204ENST00000461897 FAAP20Q6NZ36 180 aa11.14□□□□□ -0.63
COL4A6-204ENST00000461897 PIP4P1Q86T03 277 aa11.14□□□□□ -0.63
COL4A6-204ENST00000461897 ZNF676Q8N7Q3 588 aa11.14□□□□□ -0.63
COL4A6-204ENST00000461897 PRSS33Q8NF86 280 aa11.14□□□□□ -0.63
COL4A6-204ENST00000461897 OTOSQ8NHW6 89 aa11.14□□□□□ -0.63
COL4A6-204ENST00000461897 DUSP19Q8WTR2 217 aa11.14□□□□□ -0.63
COL4A6-204ENST00000461897 CT55Q8WUE5 264 aa11.14□□□□□ -0.63
COL4A6-204ENST00000461897 CCDC120Q96HB5 630 aa11.14□□□□□ -0.63
COL4A6-204ENST00000461897 RASL10BQ96S79 203 aa11.14□□□□□ -0.63
COL4A6-204ENST00000461897 INTS14Q96SY0 518 aa11.14□□□□□ -0.63
COL4A6-204ENST00000461897 DEFB126Q9BYW3 111 aa11.14□□□□□ -0.63
COL4A6-204ENST00000461897 C1orf198Q9H425 327 aa11.14□□□□□ -0.63
COL4A6-204ENST00000461897 RDH8Q9NYR8 311 aa11.14□□□□□ -0.63
COL4A6-204ENST00000461897 FOXJ2Q9P0K8 574 aa11.14□□□□□ -0.63
COL4A6-204ENST00000461897 HRH3Q9Y5N1 445 aa11.14□□□□□ -0.63
COL4A6-204ENST00000461897 CCDC187A0A096LP49 1063 aa11.13□□□□□ -0.63
COL4A6-204ENST00000461897 C2orf72A6NCS6 295 aa11.13□□□□□ -0.63
COL4A6-204ENST00000461897 SLC17A2O00624 439 aa11.13□□□□□ -0.63
COL4A6-204ENST00000461897 CDC40O60508 579 aaKnown RBP eCLIP11.13□□□□□ -0.63
COL4A6-204ENST00000461897 NUDT14O95848 222 aa11.13□□□□□ -0.63
COL4A6-204ENST00000461897 CENPAP49450 140 aa11.13□□□□□ -0.63
COL4A6-204ENST00000461897 PLA2G7Q13093 441 aa11.13□□□□□ -0.63
COL4A6-204ENST00000461897 EXT1Q16394 746 aa11.13□□□□□ -0.63
COL4A6-204ENST00000461897 PCGF3Q3KNV8 242 aa11.13□□□□□ -0.63
COL4A6-204ENST00000461897 TEX30Q5JUR7 227 aa11.13□□□□□ -0.63
COL4A6-204ENST00000461897 OVCH2Q7RTZ1 564 aa11.13□□□□□ -0.63
COL4A6-204ENST00000461897 MISPQ8IVT2 679 aa11.13□□□□□ -0.63
COL4A6-204ENST00000461897 OR2AK2Q8NG84 335 aa11.13□□□□□ -0.63
COL4A6-204ENST00000461897 OR10G3Q8NGC4 313 aa11.13□□□□□ -0.63
COL4A6-204ENST00000461897 GPR119Q8TDV5 335 aa11.13□□□□□ -0.63
COL4A6-204ENST00000461897 SCARB1Q8WTV0 552 aa11.13□□□□□ -0.63
COL4A6-204ENST00000461897 ASB17Q8WXJ9 295 aa11.13□□□□□ -0.63
COL4A6-204ENST00000461897 OR8B4Q96RC9 309 aa11.13□□□□□ -0.63
COL4A6-204ENST00000461897 SRA1Q9HD15 236 aaKnown RBP11.13□□□□□ -0.63
COL4A6-204ENST00000461897 MYOZ1Q9NP98 299 aaPredicted RBP11.13□□□□□ -0.63
COL4A6-204ENST00000461897 ZNF224Q9NZL3 707 aa11.13□□□□□ -0.63
COL4A6-204ENST00000461897 IKZF2Q9UKS7 526 aa11.13□□□□□ -0.63
COL4A6-204ENST00000461897 TCFL5Q9UL49 500 aa11.13□□□□□ -0.63
COL4A6-204ENST00000461897 PCSK5Q92824 1860 aa11.13□□□□□ -0.63
COL4A6-204ENST00000461897 LOC100289279A0A1B0GTE1 492 aa11.12□□□□□ -0.63
COL4A6-204ENST00000461897 TVP23AA6NH52 213 aa11.12□□□□□ -0.63
COL4A6-204ENST00000461897 MASP2O00187 686 aa11.12□□□□□ -0.63
COL4A6-204ENST00000461897 SCO1O75880 301 aa11.12□□□□□ -0.63
COL4A6-204ENST00000461897 AQP8O94778 261 aa11.12□□□□□ -0.63
COL4A6-204ENST00000461897 BGLAPP02818 100 aa11.12□□□□□ -0.63
COL4A6-204ENST00000461897 HRGP04196 525 aa11.12□□□□□ -0.63
COL4A6-204ENST00000461897 F13BP05160 661 aa11.12□□□□□ -0.63
COL4A6-204ENST00000461897 HOXD4P09016 255 aaPredicted RBP11.12□□□□□ -0.63
COL4A6-204ENST00000461897 AKAIN1P0CW23 69 aa11.12□□□□□ -0.63
COL4A6-204ENST00000461897 GABRA1P14867 456 aa11.12□□□□□ -0.63
COL4A6-204ENST00000461897 PPP3CBP16298 524 aa11.12□□□□□ -0.63
COL4A6-204ENST00000461897 TCN2P20062 427 aa11.12□□□□□ -0.63
COL4A6-204ENST00000461897 PTGDSP41222 190 aa11.12□□□□□ -0.63
COL4A6-204ENST00000461897 H2BFSP57053 126 aa11.12□□□□□ -0.63
COL4A6-204ENST00000461897 ROM1Q03395 351 aa11.12□□□□□ -0.63
COL4A6-204ENST00000461897 TRIP6Q15654 476 aaKnown RBP11.12□□□□□ -0.63
COL4A6-204ENST00000461897 WDR38Q5JTN6 314 aa11.12□□□□□ -0.63
COL4A6-204ENST00000461897 NHLRC1Q6VVB1 395 aa11.12□□□□□ -0.63
COL4A6-204ENST00000461897 DPY19L4Q7Z388 723 aa11.12□□□□□ -0.63
COL4A6-204ENST00000461897 PPP1R32Q7Z5V6 425 aa11.12□□□□□ -0.63
COL4A6-204ENST00000461897 CDH26Q8IXH8 852 aa11.12□□□□□ -0.63
COL4A6-204ENST00000461897 C10orf53Q8N6V4 93 aa11.12□□□□□ -0.63
COL4A6-204ENST00000461897 CLEC1AQ8NC01 280 aa11.12□□□□□ -0.63
COL4A6-204ENST00000461897 OR6N2Q8NGY6 317 aa11.12□□□□□ -0.63
COL4A6-204ENST00000461897 OR10AC1Q8NH08 325 aa11.12□□□□□ -0.63
COL4A6-204ENST00000461897 M1APQ8TC57 530 aa11.12□□□□□ -0.63
COL4A6-204ENST00000461897 SLC22A8Q8TCC7 542 aa11.12□□□□□ -0.63
COL4A6-204ENST00000461897 GPX8Q8TED1 209 aa11.12□□□□□ -0.63
COL4A6-204ENST00000461897 PCNPQ8WW12 178 aaKnown RBP11.12□□□□□ -0.63
COL4A6-204ENST00000461897 TAAR8Q969N4 342 aa11.12□□□□□ -0.63
COL4A6-204ENST00000461897 KTI12Q96EK9 354 aaPredicted RBP11.12□□□□□ -0.63
COL4A6-204ENST00000461897 GINS4Q9BRT9 223 aa11.12□□□□□ -0.63
COL4A6-204ENST00000461897 PPA2Q9H2U2 334 aa11.12□□□□□ -0.63
COL4A6-204ENST00000461897 SDHAF2Q9NX18 166 aa11.12□□□□□ -0.63
COL4A6-204ENST00000461897 ZNF107Q9UII5 783 aaPredicted RBP11.12□□□□□ -0.63
COL4A6-204ENST00000461897 A0A1B0GTH9 108 aa11.12□□□□□ -0.63
COL4A6-204ENST00000461897 A8MXK9 166 aa11.12□□□□□ -0.63
COL4A6-204ENST00000461897 RP2O75695 350 aa11.12□□□□□ -0.63
COL4A6-204ENST00000461897 MAS1P04201 325 aa11.12□□□□□ -0.63
COL4A6-204ENST00000461897 ITGB2P05107 769 aa11.12□□□□□ -0.63
COL4A6-204ENST00000461897 GP1BBP13224 206 aa11.12□□□□□ -0.63
COL4A6-204ENST00000461897 POU3F4P49335 361 aa11.12□□□□□ -0.63
COL4A6-204ENST00000461897 C17orf67Q0P5P2 114 aa11.12□□□□□ -0.63
COL4A6-204ENST00000461897 EIF3IQ13347 325 aaKnown RBP11.12□□□□□ -0.63
COL4A6-204ENST00000461897 SLC17A1Q14916 467 aa11.12□□□□□ -0.63
COL4A6-204ENST00000461897 POMZP3Q6PJE2 187 aa11.12□□□□□ -0.63
COL4A6-204ENST00000461897 TMUB2Q71RG4 321 aa11.12□□□□□ -0.63
COL4A6-204ENST00000461897 CHMP1BQ7LBR1 199 aa11.12□□□□□ -0.63
COL4A6-204ENST00000461897 KRT77Q7Z794 578 aa11.12□□□□□ -0.63
COL4A6-204ENST00000461897 BIVMQ86UB2 503 aa11.12□□□□□ -0.63
COL4A6-204ENST00000461897 EIF4E3Q8N5X7 224 aaKnown RBP11.12□□□□□ -0.63
COL4A6-204ENST00000461897 GALNT11Q8NCW6 608 aa11.12□□□□□ -0.63
COL4A6-204ENST00000461897 OR51A4Q8NGJ6 313 aa11.12□□□□□ -0.63
COL4A6-204ENST00000461897 RNF128Q8TEB7 428 aa11.12□□□□□ -0.63
COL4A6-204ENST00000461897 SPACA9Q96E40 222 aaPredicted RBP11.12□□□□□ -0.63
COL4A6-204ENST00000461897 ZNF160Q9HCG1 818 aa11.12□□□□□ -0.63
COL4A6-204ENST00000461897 EP300Q09472 2414 aaPredicted RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms