RNA–Protein interactions for RNA: ENST00000457942.1

CHCHD3-204, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 4

Gene CHCHD3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-204ENST00000457942 PIGWQ7Z7B1 504 aa13.35□□□□□ -0.27
CHCHD3-204ENST00000457942 RNF148Q8N7C7 305 aa13.35□□□□□ -0.27
CHCHD3-204ENST00000457942 FAM156AQ8NDB6 213 aa13.35□□□□□ -0.27
CHCHD3-204ENST00000457942 OR52J3Q8NH60 311 aa13.35□□□□□ -0.27
CHCHD3-204ENST00000457942 ST7LQ8TDW4 575 aa13.35□□□□□ -0.27
CHCHD3-204ENST00000457942 ZNF418Q8TF45 676 aaPredicted RBP13.35□□□□□ -0.27
CHCHD3-204ENST00000457942 CCT8L2Q96SF2 557 aa13.35□□□□□ -0.27
CHCHD3-204ENST00000457942 ABCD2Q9UBJ2 740 aa13.35□□□□□ -0.27
CHCHD3-204ENST00000457942 ASH2LQ9UBL3 628 aa13.35□□□□□ -0.27
CHCHD3-204ENST00000457942 COA3Q9Y2R0 106 aaPredicted RBP13.35□□□□□ -0.27
CHCHD3-204ENST00000457942 TRBV4-1A0A0J9YWV2 114 aa13.34□□□□□ -0.27
CHCHD3-204ENST00000457942 A0A1W2PRQ8 180 aa13.34□□□□□ -0.27
CHCHD3-204ENST00000457942 UNC119BA6NIH7 251 aa13.34□□□□□ -0.27
CHCHD3-204ENST00000457942 ICMTO60725 284 aa13.34□□□□□ -0.27
CHCHD3-204ENST00000457942 DEAF1O75398 565 aaPredicted RBP13.34□□□□□ -0.27
CHCHD3-204ENST00000457942 ZNF26P17031 533 aaPredicted RBP13.34□□□□□ -0.27
CHCHD3-204ENST00000457942 RPS6KA3P51812 740 aa13.34□□□□□ -0.27
CHCHD3-204ENST00000457942 PSG7Q13046 419 aa13.34□□□□□ -0.27
CHCHD3-204ENST00000457942 DGCR6Q14129 220 aa13.34□□□□□ -0.27
CHCHD3-204ENST00000457942 VASH1Q7L8A9 365 aaPredicted RBP13.34□□□□□ -0.27
CHCHD3-204ENST00000457942 ADCK1Q86TW2 530 aa13.34□□□□□ -0.27
CHCHD3-204ENST00000457942 GLB1L2Q8IW92 636 aa13.34□□□□□ -0.27
CHCHD3-204ENST00000457942 OR2Z1Q8NG97 314 aa13.34□□□□□ -0.27
CHCHD3-204ENST00000457942 DCLRE1CQ96SD1 692 aaKnown RBP13.34□□□□□ -0.27
CHCHD3-204ENST00000457942 POFUT1Q9H488 388 aa13.34□□□□□ -0.27
CHCHD3-204ENST00000457942 ARL8BQ9NVJ2 186 aa13.34□□□□□ -0.27
CHCHD3-204ENST00000457942 TBCCD1Q9NVR7 557 aa13.34□□□□□ -0.27
CHCHD3-204ENST00000457942 FAM53CQ9NYF3 392 aa13.34□□□□□ -0.27
CHCHD3-204ENST00000457942 NDUFAF4Q9P032 175 aa13.34□□□□□ -0.27
CHCHD3-204ENST00000457942 PCDHB10Q9UN67 800 aa13.34□□□□□ -0.27
CHCHD3-204ENST00000457942 SIGLEC7Q9Y286 467 aa13.34□□□□□ -0.27
CHCHD3-204ENST00000457942 IER3IP1Q9Y5U9 82 aa13.34□□□□□ -0.27
CHCHD3-204ENST00000457942 UBOX5O94941 541 aa13.33□□□□□ -0.28
CHCHD3-204ENST00000457942 ADH4P08319 380 aa13.33□□□□□ -0.28
CHCHD3-204ENST00000457942 EPHA1P21709 976 aa13.33□□□□□ -0.28
CHCHD3-204ENST00000457942 LIMS1P48059 325 aa13.33□□□□□ -0.28
CHCHD3-204ENST00000457942 COMPP49747 757 aaPredicted RBP13.33□□□□□ -0.28
CHCHD3-204ENST00000457942 LCN2P80188 198 aa13.33□□□□□ -0.28
CHCHD3-204ENST00000457942 SPIBQ01892 262 aa13.33□□□□□ -0.28
CHCHD3-204ENST00000457942 PDLIM3Q53GG5 364 aaPredicted RBP13.33□□□□□ -0.28
CHCHD3-204ENST00000457942 DNM1P34Q6PK57 102 aa13.33□□□□□ -0.28
CHCHD3-204ENST00000457942 FANK1Q8TC84 345 aa13.33□□□□□ -0.28
CHCHD3-204ENST00000457942 SLC7A6Q92536 515 aa13.33□□□□□ -0.28
CHCHD3-204ENST00000457942 COG8Q96MW5 612 aa13.33□□□□□ -0.28
CHCHD3-204ENST00000457942 NRIP3Q9NQ35 241 aa13.33□□□□□ -0.28
CHCHD3-204ENST00000457942 G6PC2Q9NQR9 355 aa13.33□□□□□ -0.28
CHCHD3-204ENST00000457942 PURGQ9UJV8 347 aaKnown RBP13.33□□□□□ -0.28
CHCHD3-204ENST00000457942 A0A0A6YYJ9 748 aa13.32□□□□□ -0.28
CHCHD3-204ENST00000457942 J3QLI3 93 aa13.32□□□□□ -0.28
CHCHD3-204ENST00000457942 IMPA2O14732 288 aa13.32□□□□□ -0.28
CHCHD3-204ENST00000457942 PPP1R3DO95685 299 aa13.32□□□□□ -0.28
CHCHD3-204ENST00000457942 CD55P08174 381 aa13.32□□□□□ -0.28
CHCHD3-204ENST00000457942 SBK2P0C263 348 aa13.32□□□□□ -0.28
CHCHD3-204ENST00000457942 ADRA2CP18825 462 aa13.32□□□□□ -0.28
CHCHD3-204ENST00000457942 TNFRSF1AP19438 455 aa13.32□□□□□ -0.28
CHCHD3-204ENST00000457942 PRDX6P30041 224 aa13.32□□□□□ -0.28
CHCHD3-204ENST00000457942 OMPP47874 163 aa13.32□□□□□ -0.28
CHCHD3-204ENST00000457942 DEFA6Q01524 100 aa13.32□□□□□ -0.28
CHCHD3-204ENST00000457942 HNRNPA0Q13151 305 aaKnown RBP13.32□□□□□ -0.28
CHCHD3-204ENST00000457942 SEC23BQ15437 767 aa13.32□□□□□ -0.28
CHCHD3-204ENST00000457942 SPRNQ5BIV9 151 aa13.32□□□□□ -0.28
CHCHD3-204ENST00000457942 SMARCD3Q6STE5 483 aa13.32□□□□□ -0.28
CHCHD3-204ENST00000457942 DPY19L2P2Q6ZN68 376 aa13.32□□□□□ -0.28
CHCHD3-204ENST00000457942 TSEN54Q7Z6J9 526 aaKnown RBP13.32□□□□□ -0.28
CHCHD3-204ENST00000457942 JAZF1Q86VZ6 243 aa13.32□□□□□ -0.28
CHCHD3-204ENST00000457942 OR5AS1Q8N127 324 aa13.32□□□□□ -0.28
CHCHD3-204ENST00000457942 FAM86B1Q8N7N1 296 aa13.32□□□□□ -0.28
CHCHD3-204ENST00000457942 OR1F12Q8NHA8 337 aa13.32□□□□□ -0.28
CHCHD3-204ENST00000457942 ZFAND2BQ8WV99 257 aa13.32□□□□□ -0.28
CHCHD3-204ENST00000457942 MCUR1Q96AQ8 359 aa13.32□□□□□ -0.28
CHCHD3-204ENST00000457942 CMBLQ96DG6 245 aa13.32□□□□□ -0.28
CHCHD3-204ENST00000457942 GPX7Q96SL4 187 aaPredicted RBP13.32□□□□□ -0.28
CHCHD3-204ENST00000457942 TMPRSS13Q9BYE2 586 aa13.32□□□□□ -0.28
CHCHD3-204ENST00000457942 NUAK2Q9H093 628 aa13.32□□□□□ -0.28
CHCHD3-204ENST00000457942 DCAF13Q9NV06 445 aaKnown RBP13.32□□□□□ -0.28
CHCHD3-204ENST00000457942 PTTG3PQ9NZH4 202 aa13.32□□□□□ -0.28
CHCHD3-204ENST00000457942 VSX1Q9NZR4 365 aaPredicted RBP13.32□□□□□ -0.28
CHCHD3-204ENST00000457942 STARD10Q9Y365 291 aa13.32□□□□□ -0.28
CHCHD3-204ENST00000457942 PCDHGB1Q9Y5G3 927 aa13.32□□□□□ -0.28
CHCHD3-204ENST00000457942 NPTNQ9Y639 398 aa13.32□□□□□ -0.28
CHCHD3-204ENST00000457942 TMEM89A2RUT3 159 aa13.31□□□□□ -0.28
CHCHD3-204ENST00000457942 RER1O15258 196 aa13.31□□□□□ -0.28
CHCHD3-204ENST00000457942 SURF4O15260 269 aa13.31□□□□□ -0.28
CHCHD3-204ENST00000457942 PTP4A3O75365 173 aa13.31□□□□□ -0.28
CHCHD3-204ENST00000457942 DCTN3O75935 186 aa13.31□□□□□ -0.28
CHCHD3-204ENST00000457942 TUBG1P23258 451 aa13.31□□□□□ -0.28
CHCHD3-204ENST00000457942 CRABP1P29762 137 aa13.31□□□□□ -0.28
CHCHD3-204ENST00000457942 SMIM11AP58511 58 aa13.31□□□□□ -0.28
CHCHD3-204ENST00000457942 LSM6P62312 80 aaKnown RBP13.31□□□□□ -0.28
CHCHD3-204ENST00000457942 CDK5R2Q13319 367 aa13.31□□□□□ -0.28
CHCHD3-204ENST00000457942 LEG1Q6P5S2 330 aa13.31□□□□□ -0.28
CHCHD3-204ENST00000457942 PTCHD4Q6ZW05 846 aa13.31□□□□□ -0.28
CHCHD3-204ENST00000457942 C1QL2Q7Z5L3 287 aa13.31□□□□□ -0.28
CHCHD3-204ENST00000457942 BPIFB2Q8N4F0 458 aa13.31□□□□□ -0.28
CHCHD3-204ENST00000457942 SPICQ8N5J4 248 aa13.31□□□□□ -0.28
CHCHD3-204ENST00000457942 OR5L1Q8NGL2 311 aa13.31□□□□□ -0.28
CHCHD3-204ENST00000457942 ITLN1Q8WWA0 313 aa13.31□□□□□ -0.28
CHCHD3-204ENST00000457942 ERMAPQ96PL5 475 aaPredicted RBP13.31□□□□□ -0.28
CHCHD3-204ENST00000457942 C7orf69Q9H7B7 122 aa13.31□□□□□ -0.28
CHCHD3-204ENST00000457942 TUBG2Q9NRH3 451 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms