RNA–Protein interactions for RNA: ENST00000456953.5

SNHG17-208, Transcript of small nucleolar RNA host gene 17, human

TSL 3 BASIC

Gene SNHG17, Length 546 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG17-208	ENST00000456953	IGHV3OR16-10	A0A075B7F0	116 aa		11.07	□□□□□ -0.64
SNHG17-208	ENST00000456953	IQCM	A0A1B0GVH7	501 aa		11.07	□□□□□ -0.64
SNHG17-208	ENST00000456953	MDFIC2	A0A1B0GVS7	189 aa		11.07	□□□□□ -0.64
SNHG17-208	ENST00000456953	ZSCAN5B	A6NJL1	495 aa		11.07	□□□□□ -0.64
SNHG17-208	ENST00000456953		J3KTA2	159 aa		11.07	□□□□□ -0.64
SNHG17-208	ENST00000456953	GNGT2	O14610	69 aa		11.07	□□□□□ -0.64
SNHG17-208	ENST00000456953	DIRAS1	O95057	198 aa		11.07	□□□□□ -0.64
SNHG17-208	ENST00000456953	FCGR1A	P12314	374 aa		11.07	□□□□□ -0.64
SNHG17-208	ENST00000456953	SELE	P16581	610 aa		11.07	□□□□□ -0.64
SNHG17-208	ENST00000456953	LIPA	P38571	399 aa		11.07	□□□□□ -0.64
SNHG17-208	ENST00000456953	CDH12	P55289	794 aa		11.07	□□□□□ -0.64
SNHG17-208	ENST00000456953	SMIM11A	P58511	58 aa		11.07	□□□□□ -0.64
SNHG17-208	ENST00000456953	SEC61A1	P61619	476 aa	Known RBP	11.07	□□□□□ -0.64
SNHG17-208	ENST00000456953	RELB	Q01201	579 aa		11.07	□□□□□ -0.64
SNHG17-208	ENST00000456953	SPIB	Q01892	262 aa		11.07	□□□□□ -0.64
SNHG17-208	ENST00000456953	ST3GAL3	Q11203	375 aa		11.07	□□□□□ -0.64
SNHG17-208	ENST00000456953	HLX	Q14774	488 aa	Predicted RBP	11.07	□□□□□ -0.64
SNHG17-208	ENST00000456953	TAF9	Q16594	264 aa		11.07	□□□□□ -0.64
SNHG17-208	ENST00000456953	ZNF718	Q3SXZ3	478 aa		11.07	□□□□□ -0.64
SNHG17-208	ENST00000456953	SLC36A2	Q495M3	483 aa		11.07	□□□□□ -0.64
SNHG17-208	ENST00000456953	ESCO2	Q56NI9	601 aa		11.07	□□□□□ -0.64
SNHG17-208	ENST00000456953	SWT1	Q5T5J6	900 aa	Known RBP	11.07	□□□□□ -0.64
SNHG17-208	ENST00000456953	WDR88	Q6ZMY6	472 aa		11.07	□□□□□ -0.64
SNHG17-208	ENST00000456953	JAZF1	Q86VZ6	243 aa		11.07	□□□□□ -0.64
SNHG17-208	ENST00000456953	OR1J1	Q8NGS3	322 aa		11.07	□□□□□ -0.64
SNHG17-208	ENST00000456953	PYDC1	Q8WXC3	89 aa		11.07	□□□□□ -0.64
SNHG17-208	ENST00000456953	ZDHHC16	Q969W1	377 aa		11.07	□□□□□ -0.64
SNHG17-208	ENST00000456953	SLCO4A1	Q96BD0	722 aa		11.07	□□□□□ -0.64
SNHG17-208	ENST00000456953	EPYC	Q99645	322 aa		11.07	□□□□□ -0.64
SNHG17-208	ENST00000456953	SLC30A2	Q9BRI3	323 aa		11.07	□□□□□ -0.64
SNHG17-208	ENST00000456953	RNF121	Q9H920	327 aa		11.07	□□□□□ -0.64
SNHG17-208	ENST00000456953	MRPL39	Q9NYK5	338 aa	Known RBP	11.07	□□□□□ -0.64
SNHG17-208	ENST00000456953	RHCG	Q9UBD6	479 aa		11.07	□□□□□ -0.64
SNHG17-208	ENST00000456953	CGGBP1	Q9UFW8	167 aa	Predicted RBP	11.07	□□□□□ -0.64
SNHG17-208	ENST00000456953	ZDHHC8	Q9ULC8	765 aa		11.07	□□□□□ -0.64
SNHG17-208	ENST00000456953		A0A0B4J2E0	115 aa		11.06	□□□□□ -0.64
SNHG17-208	ENST00000456953		A0A1B0GX12	115 aa		11.06	□□□□□ -0.64
SNHG17-208	ENST00000456953		F5H0A9	414 aa	Predicted RBP	11.06	□□□□□ -0.64
SNHG17-208	ENST00000456953	PIN1P1	O15428	100 aa		11.06	□□□□□ -0.64
SNHG17-208	ENST00000456953	CHP2	O43745	196 aa		11.06	□□□□□ -0.64
SNHG17-208	ENST00000456953	GADD45G	O95257	159 aa		11.06	□□□□□ -0.64
SNHG17-208	ENST00000456953	TSPAN15	O95858	294 aa		11.06	□□□□□ -0.64
SNHG17-208	ENST00000456953	CST1	P01037	141 aa		11.06	□□□□□ -0.64
SNHG17-208	ENST00000456953	H1F0	P07305	194 aa	Known RBP	11.06	□□□□□ -0.64
SNHG17-208	ENST00000456953	CD55	P08174	381 aa		11.06	□□□□□ -0.64
SNHG17-208	ENST00000456953	THRB	P10828	461 aa		11.06	□□□□□ -0.64
SNHG17-208	ENST00000456953	RRM2	P31350	389 aa		11.06	□□□□□ -0.64
SNHG17-208	ENST00000456953	MAGEA2	P43356	314 aa		11.06	□□□□□ -0.64
SNHG17-208	ENST00000456953	KRTAP10-3	P60369	221 aa		11.06	□□□□□ -0.64
SNHG17-208	ENST00000456953	PLP2	Q04941	152 aa		11.06	□□□□□ -0.64
SNHG17-208	ENST00000456953	TRAM2	Q15035	370 aa		11.06	□□□□□ -0.64
SNHG17-208	ENST00000456953	ZMAT1	Q5H9K5	638 aa		11.06	□□□□□ -0.64
SNHG17-208	ENST00000456953	FGD3	Q5JSP0	725 aa		11.06	□□□□□ -0.64
SNHG17-208	ENST00000456953	OR2T5	Q6IEZ7	315 aa		11.06	□□□□□ -0.64
SNHG17-208	ENST00000456953	FIP1L1	Q6UN15	594 aa	Known RBP	11.06	□□□□□ -0.64
SNHG17-208	ENST00000456953	LRRC28	Q86X40	367 aa	Predicted RBP	11.06	□□□□□ -0.64
SNHG17-208	ENST00000456953	OFCC1	Q8IZS5	231 aa		11.06	□□□□□ -0.64
SNHG17-208	ENST00000456953	PAPD5	Q8NDF8	572 aa	Known RBP	11.06	□□□□□ -0.64
SNHG17-208	ENST00000456953	OR2T29	Q8NH02	315 aa		11.06	□□□□□ -0.64
SNHG17-208	ENST00000456953	IPCEF1	Q8WWN9	437 aa	Predicted RBP	11.06	□□□□□ -0.64
SNHG17-208	ENST00000456953	TMEM54	Q969K7	222 aa		11.06	□□□□□ -0.64
SNHG17-208	ENST00000456953	DUS3L	Q96G46	650 aa	Known RBP	11.06	□□□□□ -0.64
SNHG17-208	ENST00000456953	MPP4	Q96JB8	637 aa		11.06	□□□□□ -0.64
SNHG17-208	ENST00000456953	DCLRE1C	Q96SD1	692 aa	Known RBP	11.06	□□□□□ -0.64
SNHG17-208	ENST00000456953	REEP1	Q9H902	201 aa		11.06	□□□□□ -0.64
SNHG17-208	ENST00000456953	NMNAT1	Q9HAN9	279 aa	Predicted RBP	11.06	□□□□□ -0.64
SNHG17-208	ENST00000456953	ARMC1	Q9NVT9	282 aa		11.06	□□□□□ -0.64
SNHG17-208	ENST00000456953	GLTP	Q9NZD2	209 aa		11.06	□□□□□ -0.64
SNHG17-208	ENST00000456953	A4GNT	Q9UNA3	340 aa		11.06	□□□□□ -0.64
SNHG17-208	ENST00000456953	TRAV40	A0A0B4J280	105 aa		11.05	□□□□□ -0.64
SNHG17-208	ENST00000456953	PLPP3	O14495	311 aa		11.05	□□□□□ -0.64
SNHG17-208	ENST00000456953	FFAR1	O14842	300 aa		11.05	□□□□□ -0.64
SNHG17-208	ENST00000456953	E2F6	O75461	281 aa		11.05	□□□□□ -0.64
SNHG17-208	ENST00000456953	TIPRL	O75663	272 aa		11.05	□□□□□ -0.64
SNHG17-208	ENST00000456953	SERPINI2	O75830	405 aa		11.05	□□□□□ -0.64
SNHG17-208	ENST00000456953	KRT36	O76013	467 aa		11.05	□□□□□ -0.64
SNHG17-208	ENST00000456953	BGLAP	P02818	100 aa		11.05	□□□□□ -0.64
SNHG17-208	ENST00000456953	AHCY	P23526	432 aa		11.05	□□□□□ -0.64
SNHG17-208	ENST00000456953	FAS	P25445	335 aa		11.05	□□□□□ -0.64
SNHG17-208	ENST00000456953	APLNR	P35414	380 aa		11.05	□□□□□ -0.64
SNHG17-208	ENST00000456953	BID	P55957	195 aa		11.05	□□□□□ -0.64
SNHG17-208	ENST00000456953	RPL15	P61313	204 aa	Known RBP	11.05	□□□□□ -0.64
SNHG17-208	ENST00000456953	BTG1	P62324	171 aa		11.05	□□□□□ -0.64
SNHG17-208	ENST00000456953	DEFB112	Q30KQ8	113 aa		11.05	□□□□□ -0.64
SNHG17-208	ENST00000456953	NRN1L	Q496H8	165 aa		11.05	□□□□□ -0.64
SNHG17-208	ENST00000456953	TMEM255A	Q5JRV8	349 aa		11.05	□□□□□ -0.64
SNHG17-208	ENST00000456953	SPATA46	Q5T0L3	261 aa		11.05	□□□□□ -0.64
SNHG17-208	ENST00000456953	MBNL2	Q5VZF2	373 aa	Known RBP	11.05	□□□□□ -0.64
SNHG17-208	ENST00000456953	TTC33	Q6PID6	262 aa	Predicted RBP	11.05	□□□□□ -0.64
SNHG17-208	ENST00000456953	LRFN4	Q6PJG9	635 aa		11.05	□□□□□ -0.64
SNHG17-208	ENST00000456953	BTNL3	Q6UXE8	466 aa		11.05	□□□□□ -0.64
SNHG17-208	ENST00000456953	LRRN1	Q6UXK5	716 aa		11.05	□□□□□ -0.64
SNHG17-208	ENST00000456953	UNQ6126/PRO20091	Q6UXV3	157 aa		11.05	□□□□□ -0.64
SNHG17-208	ENST00000456953	RRM2B	Q7LG56	351 aa		11.05	□□□□□ -0.64
SNHG17-208	ENST00000456953	SLC16A14	Q7RTX9	510 aa		11.05	□□□□□ -0.64
SNHG17-208	ENST00000456953	TSEN54	Q7Z6J9	526 aa	Known RBP	11.05	□□□□□ -0.64
SNHG17-208	ENST00000456953	TSPYL5	Q86VY4	417 aa	Predicted RBP	11.05	□□□□□ -0.64
SNHG17-208	ENST00000456953	TMEM86B	Q8N661	226 aa		11.05	□□□□□ -0.64
SNHG17-208	ENST00000456953	OR4K5	Q8NGD3	323 aa		11.05	□□□□□ -0.64
SNHG17-208	ENST00000456953	OR52J3	Q8NH60	311 aa		11.05	□□□□□ -0.64

Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms