RNA–Protein interactions for RNA: ENST00000456948.5

CBX3-204, Transcript of chromobox 3, humanhuman

TSL 5

Gene CBX3, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-204ENST00000456948 CIB2O75838 187 aa19.87■□□□□ 0.77
CBX3-204ENST00000456948 IGHV3-13P01766 116 aa19.87■□□□□ 0.77
CBX3-204ENST00000456948 ANXA8P13928 327 aa19.87■□□□□ 0.77
CBX3-204ENST00000456948 ZNF3P17036 446 aa19.87■□□□□ 0.77
CBX3-204ENST00000456948 HOXB4P17483 251 aaPredicted RBP19.87■□□□□ 0.77
CBX3-204ENST00000456948 WNT5AP41221 380 aa19.87■□□□□ 0.77
CBX3-204ENST00000456948 BLVRAP53004 296 aa19.87■□□□□ 0.77
CBX3-204ENST00000456948 ECH1Q13011 328 aa19.87■□□□□ 0.77
CBX3-204ENST00000456948 MSMPQ1L6U9 139 aa19.87■□□□□ 0.77
CBX3-204ENST00000456948 C1orf146Q5VVC0 180 aa19.87■□□□□ 0.77
CBX3-204ENST00000456948 ZNF786Q8N393 782 aa19.87■□□□□ 0.77
CBX3-204ENST00000456948 MAPK1IP1LQ8NDC0 245 aa19.87■□□□□ 0.77
CBX3-204ENST00000456948 PAPD5Q8NDF8 572 aaKnown RBP19.87■□□□□ 0.77
CBX3-204ENST00000456948 OR5L1Q8NGL2 311 aa19.87■□□□□ 0.77
CBX3-204ENST00000456948 CGGBP1Q9UFW8 167 aaPredicted RBP19.87■□□□□ 0.77
CBX3-204ENST00000456948 HIVEP2P31629 2446 aa19.86■□□□□ 0.77
CBX3-204ENST00000456948 SOX14O95416 240 aa19.86■□□□□ 0.77
CBX3-204ENST00000456948 CLPTM1O96005 669 aa19.86■□□□□ 0.77
CBX3-204ENST00000456948 GAAP10253 952 aa19.86■□□□□ 0.77
CBX3-204ENST00000456948 NAT2P11245 290 aa19.86■□□□□ 0.77
CBX3-204ENST00000456948 RGS6P49758 472 aa19.86■□□□□ 0.77
CBX3-204ENST00000456948 ZMAT1Q5H9K5 638 aa19.86■□□□□ 0.77
CBX3-204ENST00000456948 ELFN2Q5R3F8 820 aa19.86■□□□□ 0.77
CBX3-204ENST00000456948 MBNL2Q5VZF2 373 aaKnown RBP19.86■□□□□ 0.77
CBX3-204ENST00000456948 ZNF101Q8IZC7 436 aa19.86■□□□□ 0.77
CBX3-204ENST00000456948 SLC26A10Q8NG04 563 aa19.86■□□□□ 0.77
CBX3-204ENST00000456948 SLC25A40Q8TBP6 338 aa19.86■□□□□ 0.77
CBX3-204ENST00000456948 NRBF2Q96F24 287 aa19.86■□□□□ 0.77
CBX3-204ENST00000456948 PLA2G12AQ9BZM1 189 aa19.86■□□□□ 0.77
CBX3-204ENST00000456948 J3QW42 95 aa19.85■□□□□ 0.77
CBX3-204ENST00000456948 RER1O15258 196 aa19.85■□□□□ 0.77
CBX3-204ENST00000456948 NR4A2P43354 598 aa19.85■□□□□ 0.77
CBX3-204ENST00000456948 ERVS71-1P61550 626 aa19.85■□□□□ 0.77
CBX3-204ENST00000456948 MAD2L1BPQ15013 274 aaPredicted RBP19.85■□□□□ 0.77
CBX3-204ENST00000456948 CCDC121Q6ZUS5 278 aa19.85■□□□□ 0.77
CBX3-204ENST00000456948 ATG16L2Q8NAA4 619 aa19.85■□□□□ 0.77
CBX3-204ENST00000456948 CYB561A3Q8NBI2 242 aa19.85■□□□□ 0.77
CBX3-204ENST00000456948 OR8D4Q8NGM9 314 aa19.85■□□□□ 0.77
CBX3-204ENST00000456948 KLF14Q8TD94 323 aaPredicted RBP19.85■□□□□ 0.77
CBX3-204ENST00000456948 DNAJC9Q8WXX5 260 aa19.85■□□□□ 0.77
CBX3-204ENST00000456948 RDH5Q92781 318 aa19.85■□□□□ 0.77
CBX3-204ENST00000456948 MARS2Q96GW9 593 aaKnown RBP19.85■□□□□ 0.77
CBX3-204ENST00000456948 PITX2Q99697 317 aa19.85■□□□□ 0.77
CBX3-204ENST00000456948 COQ7Q99807 217 aa19.85■□□□□ 0.77
CBX3-204ENST00000456948 NIPSNAP1Q9BPW8 284 aa19.85■□□□□ 0.77
CBX3-204ENST00000456948 OR2J1Q9GZK6 312 aa19.85■□□□□ 0.77
CBX3-204ENST00000456948 DECR2Q9NUI1 292 aa19.85■□□□□ 0.77
CBX3-204ENST00000456948 ARMC1Q9NVT9 282 aa19.85■□□□□ 0.77
CBX3-204ENST00000456948 MYEF2Q9P2K5 600 aaKnown RBP19.85■□□□□ 0.77
CBX3-204ENST00000456948 TLN2Q9Y4G6 2542 aa19.85■□□□□ 0.77
CBX3-204ENST00000456948 C17orf100A8MU93 164 aa19.84■□□□□ 0.77
CBX3-204ENST00000456948 TLX2O43763 284 aaPredicted RBP19.84■□□□□ 0.77
CBX3-204ENST00000456948 HMGN1P05114 100 aa19.84■□□□□ 0.77
CBX3-204ENST00000456948 PAICSP22234 425 aaKnown RBP19.84■□□□□ 0.77
CBX3-204ENST00000456948 FMO3P31513 532 aa19.84■□□□□ 0.77
CBX3-204ENST00000456948 MRPS11P82912 194 aaKnown RBP19.84■□□□□ 0.77
CBX3-204ENST00000456948 MEP1BQ16820 701 aa19.84■□□□□ 0.77
CBX3-204ENST00000456948 ALKBH6Q3KRA9 238 aa19.84■□□□□ 0.77
CBX3-204ENST00000456948 CCDC92Q53HC0 331 aaPredicted RBP19.84■□□□□ 0.77
CBX3-204ENST00000456948 FAM209AQ5JX71 171 aa19.84■□□□□ 0.77
CBX3-204ENST00000456948 SPATA46Q5T0L3 261 aa19.84■□□□□ 0.77
CBX3-204ENST00000456948 SLC27A4Q6P1M0 643 aa19.84■□□□□ 0.77
CBX3-204ENST00000456948 SLC37A3Q8NCC5 494 aa19.84■□□□□ 0.77
CBX3-204ENST00000456948 FN3KQ9H479 309 aa19.84■□□□□ 0.77
CBX3-204ENST00000456948 NKIRAS2Q9NYR9 191 aa19.84■□□□□ 0.77
CBX3-204ENST00000456948 KIF17Q9P2E2 1029 aa19.84■□□□□ 0.77
CBX3-204ENST00000456948 LHFPL6Q9Y693 200 aa19.84■□□□□ 0.77
CBX3-204ENST00000456948 ABCA1O95477 2261 aa19.83■□□□□ 0.77
CBX3-204ENST00000456948 TPD52L2O43399 206 aaKnown RBP19.83■□□□□ 0.77
CBX3-204ENST00000456948 GPANK1O95872 356 aa19.83■□□□□ 0.77
CBX3-204ENST00000456948 GIFP27352 417 aa19.83■□□□□ 0.77
CBX3-204ENST00000456948 POU1F1P28069 291 aa19.83■□□□□ 0.77
CBX3-204ENST00000456948 GRK5P34947 590 aa19.83■□□□□ 0.77
CBX3-204ENST00000456948 SLC25A1P53007 311 aa19.83■□□□□ 0.77
CBX3-204ENST00000456948 HIST1H3AP68431 136 aa19.83■□□□□ 0.77
CBX3-204ENST00000456948 GGTLC2Q14390 218 aa19.83■□□□□ 0.77
CBX3-204ENST00000456948 HIST2H3PS2Q5TEC6 136 aa19.83■□□□□ 0.77
CBX3-204ENST00000456948 RFPL4BQ6ZWI9 263 aa19.83■□□□□ 0.77
CBX3-204ENST00000456948 HIST2H3AQ71DI3 136 aa19.83■□□□□ 0.77
CBX3-204ENST00000456948 DIRC2Q96SL1 478 aa19.83■□□□□ 0.77
CBX3-204ENST00000456948 CD5LO43866 347 aa19.82■□□□□ 0.76
CBX3-204ENST00000456948 NGFP01138 241 aa19.82■□□□□ 0.76
CBX3-204ENST00000456948 TFP02787 698 aa19.82■□□□□ 0.76
CBX3-204ENST00000456948 IGFBP1P08833 259 aaPredicted RBP19.82■□□□□ 0.76
CBX3-204ENST00000456948 FCGR1AP12314 374 aa19.82■□□□□ 0.76
CBX3-204ENST00000456948 OSMP13725 252 aa19.82■□□□□ 0.76
CBX3-204ENST00000456948 ACHEP22303 614 aa19.82■□□□□ 0.76
CBX3-204ENST00000456948 ERFP50548 548 aa19.82■□□□□ 0.76
CBX3-204ENST00000456948 ZNF81P51508 661 aa19.82■□□□□ 0.76
CBX3-204ENST00000456948 TMEM249Q2WGJ8 235 aa19.82■□□□□ 0.76
CBX3-204ENST00000456948 OTPQ5XKR4 325 aa19.82■□□□□ 0.76
CBX3-204ENST00000456948 SHQ1Q6PI26 577 aaKnown RBP19.82■□□□□ 0.76
CBX3-204ENST00000456948 OR4Q3Q8NH05 313 aa19.82■□□□□ 0.76
CBX3-204ENST00000456948 PTP4A1Q93096 173 aa19.82■□□□□ 0.76
CBX3-204ENST00000456948 APOBEC3DQ96AK3 386 aaPredicted RBP19.82■□□□□ 0.76
CBX3-204ENST00000456948 DDOQ99489 341 aa19.82■□□□□ 0.76
CBX3-204ENST00000456948 RBM4Q9BWF3 364 aaKnown RBP19.82■□□□□ 0.76
CBX3-204ENST00000456948 EGLN1Q9GZT9 426 aa19.82■□□□□ 0.76
CBX3-204ENST00000456948 CHODLQ9H9P2 273 aa19.82■□□□□ 0.76
CBX3-204ENST00000456948 CMC2Q9NRP2 79 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms