RNA–Protein interactions for RNA: ENST00000455359.5

HMGXB4-204, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 1,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-204ENST00000455359 POM121L2Q96KW2 1035 aa12.4□□□□□ -0.42
HMGXB4-204ENST00000455359 CLEC4MQ9H2X3 399 aaPredicted RBP12.4□□□□□ -0.42
HMGXB4-204ENST00000455359 CDH20Q9HBT6 801 aa12.4□□□□□ -0.42
HMGXB4-204ENST00000455359 DDX28Q9NUL7 540 aaKnown RBP12.4□□□□□ -0.42
HMGXB4-204ENST00000455359 DNAJC27Q9NZQ0 273 aa12.4□□□□□ -0.42
HMGXB4-204ENST00000455359 RPL36Q9Y3U8 105 aaKnown RBP12.4□□□□□ -0.42
HMGXB4-204ENST00000455359 VSTM5A8MXK1 200 aa12.39□□□□□ -0.43
HMGXB4-204ENST00000455359 CELA3BP08861 270 aa12.39□□□□□ -0.43
HMGXB4-204ENST00000455359 SBK2P0C263 348 aa12.39□□□□□ -0.43
HMGXB4-204ENST00000455359 OR2T7P0C7T2 308 aa12.39□□□□□ -0.43
HMGXB4-204ENST00000455359 ALOX5APP20292 161 aa12.39□□□□□ -0.43
HMGXB4-204ENST00000455359 TUBG1P23258 451 aa12.39□□□□□ -0.43
HMGXB4-204ENST00000455359 ATP6V1E1P36543 226 aa12.39□□□□□ -0.43
HMGXB4-204ENST00000455359 SLC15A1P46059 708 aa12.39□□□□□ -0.43
HMGXB4-204ENST00000455359 HTR5AP47898 357 aa12.39□□□□□ -0.43
HMGXB4-204ENST00000455359 MTNR1AP48039 350 aa12.39□□□□□ -0.43
HMGXB4-204ENST00000455359 RGS6P49758 472 aa12.39□□□□□ -0.43
HMGXB4-204ENST00000455359 CORO6Q6QEF8 472 aa12.39□□□□□ -0.43
HMGXB4-204ENST00000455359 DEGS2Q6QHC5 323 aa12.39□□□□□ -0.43
HMGXB4-204ENST00000455359 SLC22A25Q6T423 547 aa12.39□□□□□ -0.43
HMGXB4-204ENST00000455359 LYPD4Q6UWN0 246 aa12.39□□□□□ -0.43
HMGXB4-204ENST00000455359 DCXRQ7Z4W1 244 aa12.39□□□□□ -0.43
HMGXB4-204ENST00000455359 CDC20BQ86Y33 519 aa12.39□□□□□ -0.43
HMGXB4-204ENST00000455359 LINC00346Q8IVM7 164 aa12.39□□□□□ -0.43
HMGXB4-204ENST00000455359 OR2T27Q8NH04 317 aa12.39□□□□□ -0.43
HMGXB4-204ENST00000455359 AKR7LQ8NHP1 331 aa12.39□□□□□ -0.43
HMGXB4-204ENST00000455359 ST7LQ8TDW4 575 aa12.39□□□□□ -0.43
HMGXB4-204ENST00000455359 FBLIM1Q8WUP2 373 aa12.39□□□□□ -0.43
HMGXB4-204ENST00000455359 RNF133Q8WVZ7 376 aa12.39□□□□□ -0.43
HMGXB4-204ENST00000455359 MS4A3Q96HJ5 214 aa12.39□□□□□ -0.43
HMGXB4-204ENST00000455359 MAP6Q96JE9 813 aa12.39□□□□□ -0.43
HMGXB4-204ENST00000455359 HS3ST6Q96QI5 342 aa12.39□□□□□ -0.43
HMGXB4-204ENST00000455359 MYCBPQ99417 103 aaPredicted RBP12.39□□□□□ -0.43
HMGXB4-204ENST00000455359 ATF6BQ99941 703 aa12.39□□□□□ -0.43
HMGXB4-204ENST00000455359 ANKRD60Q9BZ19 345 aa12.39□□□□□ -0.43
HMGXB4-204ENST00000455359 ADGRL4Q9HBW9 690 aa12.39□□□□□ -0.43
HMGXB4-204ENST00000455359 PNRC2Q9NPJ4 139 aaKnown RBP12.39□□□□□ -0.43
HMGXB4-204ENST00000455359 TUBG2Q9NRH3 451 aa12.39□□□□□ -0.43
HMGXB4-204ENST00000455359 MRPS18AQ9NVS2 196 aaKnown RBP12.39□□□□□ -0.43
HMGXB4-204ENST00000455359 EIF3KQ9UBQ5 218 aaKnown RBP12.39□□□□□ -0.43
HMGXB4-204ENST00000455359 RAB26Q9ULW5 256 aa12.39□□□□□ -0.43
HMGXB4-204ENST00000455359 ABCA12Q86UK0 2595 aa12.39□□□□□ -0.43
HMGXB4-204ENST00000455359 NOTCH2Q04721 2471 aa12.39□□□□□ -0.43
HMGXB4-204ENST00000455359 LOC100509620A0A075B734 347 aa12.38□□□□□ -0.43
HMGXB4-204ENST00000455359 IRGMA1A4Y4 181 aa12.38□□□□□ -0.43
HMGXB4-204ENST00000455359 C5orf49A4QMS7 147 aa12.38□□□□□ -0.43
HMGXB4-204ENST00000455359 SHISA9B4DS77 424 aa12.38□□□□□ -0.43
HMGXB4-204ENST00000455359 ZNF878C9JN71 531 aa12.38□□□□□ -0.43
HMGXB4-204ENST00000455359 SELENOFO60613 162 aa12.38□□□□□ -0.43
HMGXB4-204ENST00000455359 CLIC3O95833 236 aa12.38□□□□□ -0.43
HMGXB4-204ENST00000455359 APOC1P02654 83 aa12.38□□□□□ -0.43
HMGXB4-204ENST00000455359 LYNP07948 512 aa12.38□□□□□ -0.43
HMGXB4-204ENST00000455359 NR4A1P22736 598 aa12.38□□□□□ -0.43
HMGXB4-204ENST00000455359 APEX1P27695 318 aaKnown RBP12.38□□□□□ -0.43
HMGXB4-204ENST00000455359 NAA10P41227 235 aaPredicted RBP12.38□□□□□ -0.43
HMGXB4-204ENST00000455359 RAD52P43351 418 aa12.38□□□□□ -0.43
HMGXB4-204ENST00000455359 RPS23P62266 143 aaKnown RBP12.38□□□□□ -0.43
HMGXB4-204ENST00000455359 GRB2P62993 217 aaKnown RBP12.38□□□□□ -0.43
HMGXB4-204ENST00000455359 CSNK2BP67870 215 aa12.38□□□□□ -0.43
HMGXB4-204ENST00000455359 GALK2Q01415 458 aa12.38□□□□□ -0.43
HMGXB4-204ENST00000455359 EIF2B1Q14232 305 aaKnown RBP12.38□□□□□ -0.43
HMGXB4-204ENST00000455359 KRTAP27-1Q3LI81 207 aa12.38□□□□□ -0.43
HMGXB4-204ENST00000455359 ZNF672Q499Z4 452 aaPredicted RBP12.38□□□□□ -0.43
HMGXB4-204ENST00000455359 C6orf52Q5T4I8 152 aa12.38□□□□□ -0.43
HMGXB4-204ENST00000455359 OTPQ5XKR4 325 aa12.38□□□□□ -0.43
HMGXB4-204ENST00000455359 ZNF787Q6DD87 383 aa12.38□□□□□ -0.43
HMGXB4-204ENST00000455359 KCTD18Q6PI47 426 aaPredicted RBP12.38□□□□□ -0.43
HMGXB4-204ENST00000455359 B3GLCTQ6Y288 498 aa12.38□□□□□ -0.43
HMGXB4-204ENST00000455359 CFAP77Q6ZQR2 320 aa12.38□□□□□ -0.43
HMGXB4-204ENST00000455359 EGFL6Q8IUX8 553 aa12.38□□□□□ -0.43
HMGXB4-204ENST00000455359 APH1BQ8WW43 257 aa12.38□□□□□ -0.43
HMGXB4-204ENST00000455359 SPTSSAQ969W0 71 aa12.38□□□□□ -0.43
HMGXB4-204ENST00000455359 SLAMF6Q96DU3 332 aa12.38□□□□□ -0.43
HMGXB4-204ENST00000455359 COG8Q96MW5 612 aa12.38□□□□□ -0.43
HMGXB4-204ENST00000455359 ZNF184Q99676 751 aaPredicted RBP12.38□□□□□ -0.43
HMGXB4-204ENST00000455359 ABHD6Q9BV23 337 aa12.38□□□□□ -0.43
HMGXB4-204ENST00000455359 BCL2L14Q9BZR8 327 aa12.38□□□□□ -0.43
HMGXB4-204ENST00000455359 NIPAL2Q9H841 368 aa12.38□□□□□ -0.43
HMGXB4-204ENST00000455359 TBCCD1Q9NVR7 557 aa12.38□□□□□ -0.43
HMGXB4-204ENST00000455359 LAMP5Q9UJQ1 280 aa12.38□□□□□ -0.43
HMGXB4-204ENST00000455359 EDARQ9UNE0 448 aa12.38□□□□□ -0.43
HMGXB4-204ENST00000455359 PRR14LQ5THK1 2151 aa12.38□□□□□ -0.43
HMGXB4-204ENST00000455359 ZNF670-ZNF695F2Z2N8 137 aa12.37□□□□□ -0.43
HMGXB4-204ENST00000455359 ATP6V1G2-DDX39BF2Z307 99 aa12.37□□□□□ -0.43
HMGXB4-204ENST00000455359 WBP4O75554 376 aaKnown RBP12.37□□□□□ -0.43
HMGXB4-204ENST00000455359 FADS2O95864 444 aaKnown RBP12.37□□□□□ -0.43
HMGXB4-204ENST00000455359 GNAO1P09471 354 aa12.37□□□□□ -0.43
HMGXB4-204ENST00000455359 CALCRP30988 508 aa12.37□□□□□ -0.43
HMGXB4-204ENST00000455359 OTX1P32242 354 aaPredicted RBP12.37□□□□□ -0.43
HMGXB4-204ENST00000455359 ACTC1P68032 377 aa12.37□□□□□ -0.43
HMGXB4-204ENST00000455359 ACTA1P68133 377 aa12.37□□□□□ -0.43
HMGXB4-204ENST00000455359 NKX6-1P78426 367 aaPredicted RBP12.37□□□□□ -0.43
HMGXB4-204ENST00000455359 ROM1Q03395 351 aa12.37□□□□□ -0.43
HMGXB4-204ENST00000455359 EGR3Q06889 387 aa12.37□□□□□ -0.43
HMGXB4-204ENST00000455359 RAB40BQ12829 278 aa12.37□□□□□ -0.43
HMGXB4-204ENST00000455359 KLHL22Q53GT1 634 aa12.37□□□□□ -0.43
HMGXB4-204ENST00000455359 ZNF544Q6NX49 715 aa12.37□□□□□ -0.43
HMGXB4-204ENST00000455359 MYPOPQ86VE0 399 aaPredicted RBP12.37□□□□□ -0.43
HMGXB4-204ENST00000455359 TMEM200AQ86VY9 491 aa12.37□□□□□ -0.43
HMGXB4-204ENST00000455359 SLC35F2Q8IXU6 374 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms