RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 PSKH1P11801 424 aa24.11■■□□□ 1.45
SMARCC1-203ENST00000454240 ANPEPP15144 967 aa24.11■■□□□ 1.45
SMARCC1-203ENST00000454240 SLC2A5P22732 501 aa24.11■■□□□ 1.45
SMARCC1-203ENST00000454240 WNT5AP41221 380 aa24.11■■□□□ 1.45
SMARCC1-203ENST00000454240 RAD52P43351 418 aa24.11■■□□□ 1.45
SMARCC1-203ENST00000454240 ART1P52961 327 aa24.11■■□□□ 1.45
SMARCC1-203ENST00000454240 RAD23AP54725 363 aa24.11■■□□□ 1.45
SMARCC1-203ENST00000454240 EFNB3Q15768 340 aa24.11■■□□□ 1.45
SMARCC1-203ENST00000454240 MSMPQ1L6U9 139 aa24.11■■□□□ 1.45
SMARCC1-203ENST00000454240 ELFN2Q5R3F8 820 aa24.11■■□□□ 1.45
SMARCC1-203ENST00000454240 CFAP77Q6ZQR2 320 aa24.11■■□□□ 1.45
SMARCC1-203ENST00000454240 ZBTB49Q6ZSB9 765 aa24.11■■□□□ 1.45
SMARCC1-203ENST00000454240 BBS1Q8NFJ9 593 aa24.11■■□□□ 1.45
SMARCC1-203ENST00000454240 OR2AJ1Q8NGZ0 328 aa24.11■■□□□ 1.45
SMARCC1-203ENST00000454240 EME1Q96AY2 570 aa24.11■■□□□ 1.45
SMARCC1-203ENST00000454240 HDHD2Q9H0R4 259 aa24.11■■□□□ 1.45
SMARCC1-203ENST00000454240 CMAHPQ9Y471 501 aa24.11■■□□□ 1.45
SMARCC1-203ENST00000454240 ORC6Q9Y5N6 252 aa24.11■■□□□ 1.45
SMARCC1-203ENST00000454240 USF3Q68DE3 2245 aa24.1■■□□□ 1.45
SMARCC1-203ENST00000454240 RPS27P42677 84 aaKnown RBP24.1■■□□□ 1.45
SMARCC1-203ENST00000454240 ENTPD1P49961 510 aa24.1■■□□□ 1.45
SMARCC1-203ENST00000454240 RPS23P62266 143 aaKnown RBP24.1■■□□□ 1.45
SMARCC1-203ENST00000454240 RCN1Q15293 331 aa24.1■■□□□ 1.45
SMARCC1-203ENST00000454240 TESK1Q15569 626 aa24.1■■□□□ 1.45
SMARCC1-203ENST00000454240 SLC35D3Q5M8T2 416 aa24.1■■□□□ 1.45
SMARCC1-203ENST00000454240 LRRC75A-AS1Q8N1F1 130 aa24.1■■□□□ 1.45
SMARCC1-203ENST00000454240 COQ7Q99807 217 aa24.1■■□□□ 1.45
SMARCC1-203ENST00000454240 GSX2Q9BZM3 304 aa24.1■■□□□ 1.45
SMARCC1-203ENST00000454240 BCL2L14Q9BZR8 327 aa24.1■■□□□ 1.45
SMARCC1-203ENST00000454240 ARID1AO14497 2285 aa24.1■■□□□ 1.45
SMARCC1-203ENST00000454240 PRRC2AP48634 2157 aaKnown RBP24.09■■□□□ 1.45
SMARCC1-203ENST00000454240 OTOGQ6ZRI0 2925 aa24.09■■□□□ 1.45
SMARCC1-203ENST00000454240 B9A039 149 aa24.09■■□□□ 1.45
SMARCC1-203ENST00000454240 E9PQ18 207 aa24.09■■□□□ 1.45
SMARCC1-203ENST00000454240 ZNF593O00488 134 aaPredicted RBP24.09■■□□□ 1.45
SMARCC1-203ENST00000454240 GSTT1P30711 240 aa24.09■■□□□ 1.45
SMARCC1-203ENST00000454240 ELF3P78545 371 aaPredicted RBP24.09■■□□□ 1.45
SMARCC1-203ENST00000454240 KLHL12Q53G59 568 aa24.09■■□□□ 1.45
SMARCC1-203ENST00000454240 ZNF101Q8IZC7 436 aa24.09■■□□□ 1.45
SMARCC1-203ENST00000454240 TCEANCQ8N8B7 351 aa24.09■■□□□ 1.45
SMARCC1-203ENST00000454240 MAP6Q96JE9 813 aa24.09■■□□□ 1.45
SMARCC1-203ENST00000454240 PNRC2Q9NPJ4 139 aaKnown RBP24.09■■□□□ 1.45
SMARCC1-203ENST00000454240 EIF3KQ9UBQ5 218 aaKnown RBP24.09■■□□□ 1.45
SMARCC1-203ENST00000454240 CREBBPQ92793 2442 aa24.08■■□□□ 1.45
SMARCC1-203ENST00000454240 TMEM129A0AVI4 362 aa24.08■■□□□ 1.45
SMARCC1-203ENST00000454240 M0R129 80 aa24.08■■□□□ 1.45
SMARCC1-203ENST00000454240 TLX2O43763 284 aaPredicted RBP24.08■■□□□ 1.45
SMARCC1-203ENST00000454240 CDKN1AP38936 164 aa24.08■■□□□ 1.45
SMARCC1-203ENST00000454240 PTH2RP49190 550 aa24.08■■□□□ 1.45
SMARCC1-203ENST00000454240 TIGD4Q8IY51 512 aa24.08■■□□□ 1.45
SMARCC1-203ENST00000454240 TMEM163Q8TC26 289 aa24.08■■□□□ 1.45
SMARCC1-203ENST00000454240 SLC7A6Q92536 515 aa24.08■■□□□ 1.45
SMARCC1-203ENST00000454240 MRPL24Q96A35 216 aaKnown RBP24.08■■□□□ 1.45
SMARCC1-203ENST00000454240 ZMYND19Q96E35 227 aaPredicted RBP24.08■■□□□ 1.45
SMARCC1-203ENST00000454240 C4orf45Q96LM5 186 aa24.08■■□□□ 1.45
SMARCC1-203ENST00000454240 INTS14Q96SY0 518 aa24.08■■□□□ 1.45
SMARCC1-203ENST00000454240 PITX2Q99697 317 aa24.08■■□□□ 1.45
SMARCC1-203ENST00000454240 OR51B6Q9H340 312 aa24.08■■□□□ 1.45
SMARCC1-203ENST00000454240 PLK3Q9H4B4 646 aa24.08■■□□□ 1.45
SMARCC1-203ENST00000454240 SPARCP09486 303 aa24.07■■□□□ 1.44
SMARCC1-203ENST00000454240 RSPO1Q2MKA7 263 aaPredicted RBP24.07■■□□□ 1.44
SMARCC1-203ENST00000454240 KRTAP27-1Q3LI81 207 aa24.07■■□□□ 1.44
SMARCC1-203ENST00000454240 ZIK1Q3SY52 487 aaPredicted RBP24.07■■□□□ 1.44
SMARCC1-203ENST00000454240 UNQ6126/PRO20091Q6UXV3 157 aa24.07■■□□□ 1.44
SMARCC1-203ENST00000454240 HRASLS5Q96KN8 279 aa24.07■■□□□ 1.44
SMARCC1-203ENST00000454240 DOK1Q99704 481 aa24.07■■□□□ 1.44
SMARCC1-203ENST00000454240 CACNG6Q9BXT2 260 aa24.07■■□□□ 1.44
SMARCC1-203ENST00000454240 MRPL37Q9BZE1 423 aaKnown RBP24.07■■□□□ 1.44
SMARCC1-203ENST00000454240 VPS13CQ709C8 3753 aa24.06■■□□□ 1.44
SMARCC1-203ENST00000454240 DBHP09172 617 aa24.06■■□□□ 1.44
SMARCC1-203ENST00000454240 EVX1P49640 407 aa24.06■■□□□ 1.44
SMARCC1-203ENST00000454240 ERVS71-1P61550 626 aa24.06■■□□□ 1.44
SMARCC1-203ENST00000454240 APOFQ13790 326 aa24.06■■□□□ 1.44
SMARCC1-203ENST00000454240 AADACL4Q5VUY2 407 aa24.06■■□□□ 1.44
SMARCC1-203ENST00000454240 RGS7BPQ6MZT1 257 aaPredicted RBP24.06■■□□□ 1.44
SMARCC1-203ENST00000454240 TMEM154Q6P9G4 183 aa24.06■■□□□ 1.44
SMARCC1-203ENST00000454240 ARL9Q6T311 187 aa24.06■■□□□ 1.44
SMARCC1-203ENST00000454240 DCXRQ7Z4W1 244 aa24.06■■□□□ 1.44
SMARCC1-203ENST00000454240 ERI1Q8IV48 349 aaKnown RBP24.06■■□□□ 1.44
SMARCC1-203ENST00000454240 C1orf174Q8IYL3 243 aa24.06■■□□□ 1.44
SMARCC1-203ENST00000454240 OR10S1Q8NGN2 331 aa24.06■■□□□ 1.44
SMARCC1-203ENST00000454240 OR1J1Q8NGS3 322 aa24.06■■□□□ 1.44
SMARCC1-203ENST00000454240 PERPQ96FX8 193 aa24.06■■□□□ 1.44
SMARCC1-203ENST00000454240 DCLRE1CQ96SD1 692 aaKnown RBP24.06■■□□□ 1.44
SMARCC1-203ENST00000454240 MBOAT4Q96T53 435 aa24.06■■□□□ 1.44
SMARCC1-203ENST00000454240 TEAD3Q99594 435 aa24.06■■□□□ 1.44
SMARCC1-203ENST00000454240 ATF6BQ99941 703 aa24.06■■□□□ 1.44
SMARCC1-203ENST00000454240 ELOVL3Q9HB03 270 aa24.06■■□□□ 1.44
SMARCC1-203ENST00000454240 TBCCD1Q9NVR7 557 aa24.06■■□□□ 1.44
SMARCC1-203ENST00000454240 CCDC182A6NF36 153 aa24.05■■□□□ 1.44
SMARCC1-203ENST00000454240 NGFP01138 241 aa24.05■■□□□ 1.44
SMARCC1-203ENST00000454240 LCKP06239 509 aa24.05■■□□□ 1.44
SMARCC1-203ENST00000454240 BMP4P12644 408 aa24.05■■□□□ 1.44
SMARCC1-203ENST00000454240 ZNF250P15622 560 aa24.05■■□□□ 1.44
SMARCC1-203ENST00000454240 ECH1Q13011 328 aa24.05■■□□□ 1.44
SMARCC1-203ENST00000454240 NXNL2Q5VZ03 156 aa24.05■■□□□ 1.44
SMARCC1-203ENST00000454240 RFPL4BQ6ZWI9 263 aa24.05■■□□□ 1.44
SMARCC1-203ENST00000454240 OR6N2Q8NGY6 317 aa24.05■■□□□ 1.44
SMARCC1-203ENST00000454240 TRMT61AQ96FX7 289 aaKnown RBP24.05■■□□□ 1.44
SMARCC1-203ENST00000454240 IL4I1Q96RQ9 567 aa24.05■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms