RNA–Protein interactions for RNA: ENST00000453285.1

SDC4P-201, Transcript of syndecan 4 pseudogene, humanhuman

BASIC

Gene SDC4P, Length 601 nt, Biotype processed pseudogene, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P-201ENST00000453285 ALKBH3Q96Q83 286 aaPredicted RBP5.27□□□□□ -1.57
SDC4P-201ENST00000453285 FOXB1Q99853 325 aa5.27□□□□□ -1.57
SDC4P-201ENST00000453285 PDCD1LG2Q9BQ51 273 aa5.27□□□□□ -1.57
SDC4P-201ENST00000453285 SLX1AQ9BQ83 275 aa5.27□□□□□ -1.57
SDC4P-201ENST00000453285 DCUN1D5Q9BTE7 237 aa5.27□□□□□ -1.57
SDC4P-201ENST00000453285 TMED9Q9BVK6 235 aa5.27□□□□□ -1.57
SDC4P-201ENST00000453285 CDADC1Q9BWV3 514 aa5.27□□□□□ -1.57
SDC4P-201ENST00000453285 HDHD5Q9BXW7 423 aa5.27□□□□□ -1.57
SDC4P-201ENST00000453285 MROQ9BYG7 248 aa5.27□□□□□ -1.57
SDC4P-201ENST00000453285 DCSTAMPQ9H295 470 aa5.27□□□□□ -1.57
SDC4P-201ENST00000453285 PPIL3Q9H2H8 161 aaKnown RBP5.27□□□□□ -1.57
SDC4P-201ENST00000453285 SIAEQ9HAT2 523 aa5.27□□□□□ -1.57
SDC4P-201ENST00000453285 EXOSC4Q9NPD3 245 aaKnown RBP5.27□□□□□ -1.57
SDC4P-201ENST00000453285 B3GAT2Q9NPZ5 323 aa5.27□□□□□ -1.57
SDC4P-201ENST00000453285 G6PC2Q9NQR9 355 aa5.27□□□□□ -1.57
SDC4P-201ENST00000453285 ZNF224Q9NZL3 707 aa5.27□□□□□ -1.57
SDC4P-201ENST00000453285 ASH2LQ9UBL3 628 aa5.27□□□□□ -1.57
SDC4P-201ENST00000453285 IKZF2Q9UKS7 526 aa5.27□□□□□ -1.57
SDC4P-201ENST00000453285 FBXL3Q9UKT7 428 aa5.27□□□□□ -1.57
SDC4P-201ENST00000453285 SSR3Q9UNL2 185 aa5.27□□□□□ -1.57
SDC4P-201ENST00000453285 FAM215AQ9Y5M1 114 aa5.27□□□□□ -1.57
SDC4P-201ENST00000453285 PMF1-BGLAPU3KQ54 211 aa5.27□□□□□ -1.57
SDC4P-201ENST00000453285 NBASA2RRP1 2371 aa5.27□□□□□ -1.57
SDC4P-201ENST00000453285 CADP27708 2225 aa5.27□□□□□ -1.57
SDC4P-201ENST00000453285 SPENQ96T58 3664 aaKnown RBP5.26□□□□□ -1.57
SDC4P-201ENST00000453285 TRBV5-5A0A0J9YX44 114 aa5.26□□□□□ -1.57
SDC4P-201ENST00000453285 CYSRT1A8MQ03 144 aa5.26□□□□□ -1.57
SDC4P-201ENST00000453285 PIN1P1O15428 100 aa5.26□□□□□ -1.57
SDC4P-201ENST00000453285 GPRIN2O60269 458 aa5.26□□□□□ -1.57
SDC4P-201ENST00000453285 WDR1O75083 606 aa5.26□□□□□ -1.57
SDC4P-201ENST00000453285 RGS9O75916 674 aaPredicted RBP5.26□□□□□ -1.57
SDC4P-201ENST00000453285 ZFPL1O95159 310 aa5.26□□□□□ -1.57
SDC4P-201ENST00000453285 CGAP01215 116 aa5.26□□□□□ -1.57
SDC4P-201ENST00000453285 ITGA5P08648 1049 aa5.26□□□□□ -1.57
SDC4P-201ENST00000453285 MMP7P09237 267 aaPredicted RBP5.26□□□□□ -1.57
SDC4P-201ENST00000453285 H2BFMP0C1H6 154 aa5.26□□□□□ -1.57
SDC4P-201ENST00000453285 CLEC2LP0C7M8 214 aa5.26□□□□□ -1.57
SDC4P-201ENST00000453285 CD8BP10966 210 aa5.26□□□□□ -1.57
SDC4P-201ENST00000453285 GABRA1P14867 456 aa5.26□□□□□ -1.57
SDC4P-201ENST00000453285 ANOS1P23352 680 aa5.26□□□□□ -1.57
SDC4P-201ENST00000453285 OTX1P32242 354 aaPredicted RBP5.26□□□□□ -1.57
SDC4P-201ENST00000453285 RPS19P39019 145 aaKnown RBP5.26□□□□□ -1.57
SDC4P-201ENST00000453285 GUCA1AP43080 201 aaPredicted RBP5.26□□□□□ -1.57
SDC4P-201ENST00000453285 MAGEB1P43366 347 aa5.26□□□□□ -1.57
SDC4P-201ENST00000453285 SERPINB10P48595 397 aa5.26□□□□□ -1.57
SDC4P-201ENST00000453285 MMP16P51512 607 aa5.26□□□□□ -1.57
SDC4P-201ENST00000453285 CCR9P51686 369 aa5.26□□□□□ -1.57
SDC4P-201ENST00000453285 TUBA1BP68363 451 aa5.26□□□□□ -1.57
SDC4P-201ENST00000453285 ARF1P84077 181 aaKnown RBP5.26□□□□□ -1.57
SDC4P-201ENST00000453285 MFGE8Q08431 387 aaPredicted RBP5.26□□□□□ -1.57
SDC4P-201ENST00000453285 FAPQ12884 760 aa5.26□□□□□ -1.57
SDC4P-201ENST00000453285 FOXF2Q12947 444 aa5.26□□□□□ -1.57
SDC4P-201ENST00000453285 TRAM1Q15629 374 aa5.26□□□□□ -1.57
SDC4P-201ENST00000453285 KRTAP27-1Q3LI81 207 aa5.26□□□□□ -1.57
SDC4P-201ENST00000453285 NRN1LQ496H8 165 aa5.26□□□□□ -1.57
SDC4P-201ENST00000453285 ACSM3Q53FZ2 586 aa5.26□□□□□ -1.57
SDC4P-201ENST00000453285 PRR30Q53SZ7 412 aaPredicted RBP5.26□□□□□ -1.57
SDC4P-201ENST00000453285 C1orf185Q5T7R7 199 aa5.26□□□□□ -1.57
SDC4P-201ENST00000453285 FBXW9Q5XUX1 488 aa5.26□□□□□ -1.57
SDC4P-201ENST00000453285 C22orf42Q6IC83 251 aa5.26□□□□□ -1.57
SDC4P-201ENST00000453285 KLHL24Q6TFL4 600 aa5.26□□□□□ -1.57
SDC4P-201ENST00000453285 PCSK4Q6UW60 755 aa5.26□□□□□ -1.57
SDC4P-201ENST00000453285 TFAP2EQ6VUC0 442 aa5.26□□□□□ -1.57
SDC4P-201ENST00000453285 USP43Q70EL4 1123 aa5.26□□□□□ -1.57
SDC4P-201ENST00000453285 TUBA1AQ71U36 451 aa5.26□□□□□ -1.57
SDC4P-201ENST00000453285 FAM214BQ7L5A3 538 aa5.26□□□□□ -1.57
SDC4P-201ENST00000453285 PRSS45Q7RTY3 260 aa5.26□□□□□ -1.57
SDC4P-201ENST00000453285 FAM220AQ7Z4H9 259 aa5.26□□□□□ -1.57
SDC4P-201ENST00000453285 SYT9Q86SS6 491 aa5.26□□□□□ -1.57
SDC4P-201ENST00000453285 ZNF100Q8IYN0 542 aa5.26□□□□□ -1.57
SDC4P-201ENST00000453285 LRRC18Q8N456 261 aa5.26□□□□□ -1.57
SDC4P-201ENST00000453285 RPRMLQ8N4K4 120 aa5.26□□□□□ -1.57
SDC4P-201ENST00000453285 MS4A15Q8N5U1 240 aa5.26□□□□□ -1.57
SDC4P-201ENST00000453285 TEX19Q8NA77 164 aa5.26□□□□□ -1.57
SDC4P-201ENST00000453285 GJC3Q8NFK1 279 aa5.26□□□□□ -1.57
SDC4P-201ENST00000453285 OR2AJ1Q8NGZ0 328 aa5.26□□□□□ -1.57
SDC4P-201ENST00000453285 C4orf45Q96LM5 186 aa5.26□□□□□ -1.57
SDC4P-201ENST00000453285 COQ7Q99807 217 aa5.26□□□□□ -1.57
SDC4P-201ENST00000453285 SH3GL3Q99963 347 aa5.26□□□□□ -1.57
SDC4P-201ENST00000453285 SLIRPQ9GZT3 109 aaKnown RBP5.26□□□□□ -1.57
SDC4P-201ENST00000453285 C12orf49Q9H741 205 aa5.26□□□□□ -1.57
SDC4P-201ENST00000453285 CENPMQ9NSP4 180 aa5.26□□□□□ -1.57
SDC4P-201ENST00000453285 DDX28Q9NUL7 540 aaKnown RBP5.26□□□□□ -1.57
SDC4P-201ENST00000453285 ASF1BQ9NVP2 202 aa5.26□□□□□ -1.57
SDC4P-201ENST00000453285 FAM206AQ9NX38 181 aa5.26□□□□□ -1.57
SDC4P-201ENST00000453285 MALT1Q9UDY8 824 aa5.26□□□□□ -1.57
SDC4P-201ENST00000453285 SLC22A13Q9Y226 551 aa5.26□□□□□ -1.57
SDC4P-201ENST00000453285 ZNF835Q9Y2P0 537 aa5.26□□□□□ -1.57
SDC4P-201ENST00000453285 ZNF281Q9Y2X9 895 aa5.26□□□□□ -1.57
SDC4P-201ENST00000453285 R4GMQ9 66 aa5.26□□□□□ -1.57
SDC4P-201ENST00000453285 HIVEP3Q5T1R4 2406 aa5.26□□□□□ -1.57
SDC4P-201ENST00000453285 HCFC1P51610 2035 aa5.25□□□□□ -1.57
SDC4P-201ENST00000453285 ZNF503-AS2A6NEH8 195 aa5.25□□□□□ -1.57
SDC4P-201ENST00000453285 TMEM212A6NML5 194 aa5.25□□□□□ -1.57
SDC4P-201ENST00000453285 ZNF878C9JN71 531 aa5.25□□□□□ -1.57
SDC4P-201ENST00000453285 ZNF587BE7ETH6 402 aa5.25□□□□□ -1.57
SDC4P-201ENST00000453285 SYNGR3O43761 229 aa5.25□□□□□ -1.57
SDC4P-201ENST00000453285 GATBO75879 557 aaKnown RBP5.25□□□□□ -1.57
SDC4P-201ENST00000453285 TNFSF13O75888 250 aa5.25□□□□□ -1.57
SDC4P-201ENST00000453285 KRT33AO76009 404 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms