RNA–Protein interactions for RNA: ENST00000453046.5

SQSTM1-204, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-204ENST00000453046 TMED1Q13445 227 aa15.59■□□□□ 0.09
SQSTM1-204ENST00000453046 CAMK2DQ13557 499 aa15.59■□□□□ 0.09
SQSTM1-204ENST00000453046 PHYHD1Q5SRE7 291 aa15.59■□□□□ 0.09
SQSTM1-204ENST00000453046 PLBD1Q6P4A8 553 aa15.59■□□□□ 0.09
SQSTM1-204ENST00000453046 NHLRC1Q6VVB1 395 aa15.59■□□□□ 0.09
SQSTM1-204ENST00000453046 MDP1Q86V88 176 aa15.59■□□□□ 0.09
SQSTM1-204ENST00000453046 CPOQ8IVL8 374 aa15.59■□□□□ 0.09
SQSTM1-204ENST00000453046 IPCEF1Q8WWN9 437 aaPredicted RBP15.59■□□□□ 0.09
SQSTM1-204ENST00000453046 DDOQ99489 341 aa15.59■□□□□ 0.09
SQSTM1-204ENST00000453046 ULBP2Q9BZM5 246 aa15.59■□□□□ 0.09
SQSTM1-204ENST00000453046 SEC61A2Q9H9S3 476 aa15.59■□□□□ 0.09
SQSTM1-204ENST00000453046 CNOT2Q9NZN8 540 aaKnown RBP15.59■□□□□ 0.09
SQSTM1-204ENST00000453046 RPL36Q9Y3U8 105 aaKnown RBP15.59■□□□□ 0.09
SQSTM1-204ENST00000453046 ANK3Q12955 4377 aaKnown RBP15.58■□□□□ 0.09
SQSTM1-204ENST00000453046 IRGMA1A4Y4 181 aa15.58■□□□□ 0.08
SQSTM1-204ENST00000453046 EFCAB10A6NFE3 127 aa15.58■□□□□ 0.08
SQSTM1-204ENST00000453046 SLC22A31A6NKX4 558 aa15.58■□□□□ 0.08
SQSTM1-204ENST00000453046 CENPBD1B2RD01 187 aa15.58■□□□□ 0.08
SQSTM1-204ENST00000453046 AHCYL1O43865 530 aa15.58■□□□□ 0.08
SQSTM1-204ENST00000453046 XPNPEP2O43895 674 aa15.58■□□□□ 0.08
SQSTM1-204ENST00000453046 MRPS14O60783 128 aaKnown RBP15.58■□□□□ 0.08
SQSTM1-204ENST00000453046 CD79AP11912 226 aa15.58■□□□□ 0.08
SQSTM1-204ENST00000453046 HTR1FP30939 366 aa15.58■□□□□ 0.08
SQSTM1-204ENST00000453046 PDLIM4P50479 330 aa15.58■□□□□ 0.08
SQSTM1-204ENST00000453046 SLC35A2P78381 396 aa15.58■□□□□ 0.08
SQSTM1-204ENST00000453046 LOXL1Q08397 574 aaPredicted RBP15.58■□□□□ 0.08
SQSTM1-204ENST00000453046 MELKQ14680 651 aa15.58■□□□□ 0.08
SQSTM1-204ENST00000453046 ADIPOQQ15848 244 aa15.58■□□□□ 0.08
SQSTM1-204ENST00000453046 LEG1Q6P5S2 330 aa15.58■□□□□ 0.08
SQSTM1-204ENST00000453046 ZNF813Q6ZN06 617 aa15.58■□□□□ 0.08
SQSTM1-204ENST00000453046 CYB561A3Q8NBI2 242 aa15.58■□□□□ 0.08
SQSTM1-204ENST00000453046 NUP37Q8NFH4 326 aa15.58■□□□□ 0.08
SQSTM1-204ENST00000453046 IL17RDQ8NFM7 739 aa15.58■□□□□ 0.08
SQSTM1-204ENST00000453046 C10orf105Q8TEF2 133 aa15.58■□□□□ 0.08
SQSTM1-204ENST00000453046 NANOS1Q8WY41 292 aaKnown RBP15.58■□□□□ 0.08
SQSTM1-204ENST00000453046 SORCS2Q96PQ0 1159 aa15.58■□□□□ 0.08
SQSTM1-204ENST00000453046 NMNAT3Q96T66 252 aa15.58■□□□□ 0.08
SQSTM1-204ENST00000453046 ALG12Q9BV10 488 aa15.58■□□□□ 0.08
SQSTM1-204ENST00000453046 NMNAT2Q9BZQ4 307 aa15.58■□□□□ 0.08
SQSTM1-204ENST00000453046 DUSP21Q9H596 190 aa15.58■□□□□ 0.08
SQSTM1-204ENST00000453046 FKBP14Q9NWM8 211 aa15.58■□□□□ 0.08
SQSTM1-204ENST00000453046 VSX1Q9NZR4 365 aaPredicted RBP15.58■□□□□ 0.08
SQSTM1-204ENST00000453046 H2AFY2Q9P0M6 372 aaPredicted RBP15.58■□□□□ 0.08
SQSTM1-204ENST00000453046 PSORS1C1Q9UIG5 152 aa15.58■□□□□ 0.08
SQSTM1-204ENST00000453046 PRSS37A4D1T9 235 aa15.57■□□□□ 0.08
SQSTM1-204ENST00000453046 FAM183AA6NL82 134 aa15.57■□□□□ 0.08
SQSTM1-204ENST00000453046 A8MV72 311 aaPredicted RBP15.57■□□□□ 0.08
SQSTM1-204ENST00000453046 DBTP11182 482 aaKnown RBP15.57■□□□□ 0.08
SQSTM1-204ENST00000453046 NR2C1P13056 603 aa15.57■□□□□ 0.08
SQSTM1-204ENST00000453046 SLC2A5P22732 501 aa15.57■□□□□ 0.08
SQSTM1-204ENST00000453046 CDKN2AP42771 156 aaKnown RBP15.57■□□□□ 0.08
SQSTM1-204ENST00000453046 SLC15A1P46059 708 aa15.57■□□□□ 0.08
SQSTM1-204ENST00000453046 CSNK1A1P48729 337 aa15.57■□□□□ 0.08
SQSTM1-204ENST00000453046 BIDP55957 195 aa15.57■□□□□ 0.08
SQSTM1-204ENST00000453046 CARTPTQ16568 116 aa15.57■□□□□ 0.08
SQSTM1-204ENST00000453046 TMEM249Q2WGJ8 235 aa15.57■□□□□ 0.08
SQSTM1-204ENST00000453046 SLC35D3Q5M8T2 416 aa15.57■□□□□ 0.08
SQSTM1-204ENST00000453046 LCN1P1Q5VSP4 162 aa15.57■□□□□ 0.08
SQSTM1-204ENST00000453046 MYPOPQ86VE0 399 aaPredicted RBP15.57■□□□□ 0.08
SQSTM1-204ENST00000453046 ZNF540Q8NDQ6 660 aa15.57■□□□□ 0.08
SQSTM1-204ENST00000453046 BBS1Q8NFJ9 593 aa15.57■□□□□ 0.08
SQSTM1-204ENST00000453046 OR6X1Q8NH79 312 aa15.57■□□□□ 0.08
SQSTM1-204ENST00000453046 PIMREGQ9BSJ6 248 aa15.57■□□□□ 0.08
SQSTM1-204ENST00000453046 WARS2Q9UGM6 360 aaKnown RBP15.57■□□□□ 0.08
SQSTM1-204ENST00000453046 FBXO9Q9UK97 447 aaPredicted RBP15.57■□□□□ 0.08
SQSTM1-204ENST00000453046 IGHV2OR16-5A0A0B4J2B6 119 aa15.56■□□□□ 0.08
SQSTM1-204ENST00000453046 OR6C68A6NDL8 312 aa15.56■□□□□ 0.08
SQSTM1-204ENST00000453046 ZNF503-AS2A6NEH8 195 aa15.56■□□□□ 0.08
SQSTM1-204ENST00000453046 CCDC182A6NF36 153 aa15.56■□□□□ 0.08
SQSTM1-204ENST00000453046 IGHG1P01857 330 aa15.56■□□□□ 0.08
SQSTM1-204ENST00000453046 HLA-HP01893 362 aa15.56■□□□□ 0.08
SQSTM1-204ENST00000453046 SMIM18P0DKX4 95 aa15.56■□□□□ 0.08
SQSTM1-204ENST00000453046 B4GALT1P15291 398 aa15.56■□□□□ 0.08
SQSTM1-204ENST00000453046 NPR2P20594 1047 aa15.56■□□□□ 0.08
SQSTM1-204ENST00000453046 USF1P22415 310 aaPredicted RBP15.56■□□□□ 0.08
SQSTM1-204ENST00000453046 THBS4P35443 961 aa15.56■□□□□ 0.08
SQSTM1-204ENST00000453046 HGFACQ04756 655 aa15.56■□□□□ 0.08
SQSTM1-204ENST00000453046 PIGFQ07326 219 aa15.56■□□□□ 0.08
SQSTM1-204ENST00000453046 APOFQ13790 326 aa15.56■□□□□ 0.08
SQSTM1-204ENST00000453046 EFNB3Q15768 340 aa15.56■□□□□ 0.08
SQSTM1-204ENST00000453046 GSG1Q2KHT4 349 aa15.56■□□□□ 0.08
SQSTM1-204ENST00000453046 ZNF773Q6PK81 442 aa15.56■□□□□ 0.08
SQSTM1-204ENST00000453046 AHSA2Q719I0 299 aa15.56■□□□□ 0.08
SQSTM1-204ENST00000453046 BCDIN3DQ7Z5W3 292 aaKnown RBP15.56■□□□□ 0.08
SQSTM1-204ENST00000453046 NOXO1Q8NFA2 376 aa15.56■□□□□ 0.08
SQSTM1-204ENST00000453046 TSPAN14Q8NG11 270 aa15.56■□□□□ 0.08
SQSTM1-204ENST00000453046 OR2T4Q8NH00 348 aa15.56■□□□□ 0.08
SQSTM1-204ENST00000453046 FNDC8Q8TC99 324 aa15.56■□□□□ 0.08
SQSTM1-204ENST00000453046 OTULINQ96BN8 352 aa15.56■□□□□ 0.08
SQSTM1-204ENST00000453046 KCNK17Q96T54 332 aa15.56■□□□□ 0.08
SQSTM1-204ENST00000453046 FOXB1Q99853 325 aa15.56■□□□□ 0.08
SQSTM1-204ENST00000453046 HCAR1Q9BXC0 346 aa15.56■□□□□ 0.08
SQSTM1-204ENST00000453046 PLK3Q9H4B4 646 aa15.56■□□□□ 0.08
SQSTM1-204ENST00000453046 MED20Q9H944 212 aa15.56■□□□□ 0.08
SQSTM1-204ENST00000453046 MRPS18AQ9NVS2 196 aaKnown RBP15.56■□□□□ 0.08
SQSTM1-204ENST00000453046 SCOCQ9UIL1 159 aa15.56■□□□□ 0.08
SQSTM1-204ENST00000453046 ARFGEF3Q5TH69 2177 aa15.55■□□□□ 0.08
SQSTM1-204ENST00000453046 CHD3Q12873 2000 aaKnown RBP15.55■□□□□ 0.08
SQSTM1-204ENST00000453046 A0A087WXM4 84 aa15.55■□□□□ 0.08
SQSTM1-204ENST00000453046 A0A096LNT2 108 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms