RNA–Protein interactions for RNA: ENST00000450940.5

USP40-207, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 670 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-207ENST00000450940 TSSK2Q96PF2 358 aa16.48■□□□□ 0.23
USP40-207ENST00000450940 DIRC2Q96SL1 478 aa16.48■□□□□ 0.23
USP40-207ENST00000450940 SAP30LQ9HAJ7 183 aa16.48■□□□□ 0.23
USP40-207ENST00000450940 PLEK2Q9NYT0 353 aa16.48■□□□□ 0.23
USP40-207ENST00000450940 ASH2LQ9UBL3 628 aa16.48■□□□□ 0.23
USP40-207ENST00000450940 TMCC3Q9ULS5 477 aa16.48■□□□□ 0.23
USP40-207ENST00000450940 B9D1Q9UPM9 204 aa16.48■□□□□ 0.23
USP40-207ENST00000450940 STAB1Q9NY15 2570 aa16.47■□□□□ 0.23
USP40-207ENST00000450940 FAM157AC9JC47 383 aa16.47■□□□□ 0.23
USP40-207ENST00000450940 PHF1O43189 567 aaPredicted RBP16.47■□□□□ 0.23
USP40-207ENST00000450940 IDH3BO43837 385 aa16.47■□□□□ 0.23
USP40-207ENST00000450940 KITLGP21583 273 aa16.47■□□□□ 0.23
USP40-207ENST00000450940 PCMT1P22061 227 aa16.47■□□□□ 0.23
USP40-207ENST00000450940 MAGEA2P43356 314 aa16.47■□□□□ 0.23
USP40-207ENST00000450940 MXRA7P84157 204 aa16.47■□□□□ 0.23
USP40-207ENST00000450940 ZMAT1Q5H9K5 638 aa16.47■□□□□ 0.23
USP40-207ENST00000450940 MTX3Q5HYI7 312 aa16.47■□□□□ 0.23
USP40-207ENST00000450940 DNM1P34Q6PK57 102 aa16.47■□□□□ 0.23
USP40-207ENST00000450940 ZBTB46Q86UZ6 589 aa16.47■□□□□ 0.23
USP40-207ENST00000450940 OR6V1Q8N148 313 aa16.47■□□□□ 0.23
USP40-207ENST00000450940 OR1F12Q8NHA8 337 aa16.47■□□□□ 0.23
USP40-207ENST00000450940 GNPDA2Q8TDQ7 276 aa16.47■□□□□ 0.23
USP40-207ENST00000450940 TMEM158Q8WZ71 300 aa16.47■□□□□ 0.23
USP40-207ENST00000450940 ELMOD3Q96FG2 381 aa16.47■□□□□ 0.23
USP40-207ENST00000450940 NSL1Q96IY1 281 aa16.47■□□□□ 0.23
USP40-207ENST00000450940 DCLRE1CQ96SD1 692 aaKnown RBP16.47■□□□□ 0.23
USP40-207ENST00000450940 RERGLQ9H628 205 aa16.47■□□□□ 0.23
USP40-207ENST00000450940 TREM2Q9NZC2 230 aa16.47■□□□□ 0.23
USP40-207ENST00000450940 STARD10Q9Y365 291 aa16.47■□□□□ 0.23
USP40-207ENST00000450940 RNF212BA8MTL3 300 aa16.46■□□□□ 0.23
USP40-207ENST00000450940 B2RBV5 119 aa16.46■□□□□ 0.23
USP40-207ENST00000450940 J3QW42 95 aa16.46■□□□□ 0.23
USP40-207ENST00000450940 SPRY3O43610 288 aa16.46■□□□□ 0.23
USP40-207ENST00000450940 HIST1H1CP16403 213 aaKnown RBP16.46■□□□□ 0.23
USP40-207ENST00000450940 GSTM3P21266 225 aa16.46■□□□□ 0.23
USP40-207ENST00000450940 ATP6V1B2P21281 511 aa16.46■□□□□ 0.23
USP40-207ENST00000450940 CDK5R2Q13319 367 aa16.46■□□□□ 0.23
USP40-207ENST00000450940 HFEQ30201 348 aa16.46■□□□□ 0.23
USP40-207ENST00000450940 OTPQ5XKR4 325 aa16.46■□□□□ 0.23
USP40-207ENST00000450940 PGBD2Q6P3X8 592 aa16.46■□□□□ 0.23
USP40-207ENST00000450940 LINC00471Q8N535 108 aa16.46■□□□□ 0.23
USP40-207ENST00000450940 SLC7A6Q92536 515 aa16.46■□□□□ 0.23
USP40-207ENST00000450940 HAVCR1Q96D42 359 aa16.46■□□□□ 0.23
USP40-207ENST00000450940 SAMD8Q96LT4 415 aa16.46■□□□□ 0.23
USP40-207ENST00000450940 COG8Q96MW5 612 aa16.46■□□□□ 0.23
USP40-207ENST00000450940 NMNAT3Q96T66 252 aa16.46■□□□□ 0.23
USP40-207ENST00000450940 TRIM15Q9C019 465 aa16.46■□□□□ 0.23
USP40-207ENST00000450940 EGLN1Q9GZT9 426 aa16.46■□□□□ 0.23
USP40-207ENST00000450940 POFUT1Q9H488 388 aa16.46■□□□□ 0.23
USP40-207ENST00000450940 NARFLQ9H6Q4 476 aa16.46■□□□□ 0.23
USP40-207ENST00000450940 LYVE1Q9Y5Y7 322 aa16.46■□□□□ 0.23
USP40-207ENST00000450940 LHFPL6Q9Y693 200 aa16.46■□□□□ 0.23
USP40-207ENST00000450940 CACNG2Q9Y698 323 aa16.46■□□□□ 0.23
USP40-207ENST00000450940 TCRBV5S2A0A599 114 aa16.45■□□□□ 0.22
USP40-207ENST00000450940 CLDN25C9JDP6 229 aa16.45■□□□□ 0.22
USP40-207ENST00000450940 RER1O15258 196 aa16.45■□□□□ 0.22
USP40-207ENST00000450940 TPD52L2O43399 206 aaKnown RBP16.45■□□□□ 0.22
USP40-207ENST00000450940 UBOX5O94941 541 aa16.45■□□□□ 0.22
USP40-207ENST00000450940 FAM107AO95990 144 aa16.45■□□□□ 0.22
USP40-207ENST00000450940 RENP00797 406 aa16.45■□□□□ 0.22
USP40-207ENST00000450940 MSMBP08118 114 aa16.45■□□□□ 0.22
USP40-207ENST00000450940 COX10Q12887 443 aa16.45■□□□□ 0.22
USP40-207ENST00000450940 ZNF770Q6IQ21 691 aaPredicted RBP16.45■□□□□ 0.22
USP40-207ENST00000450940 LEG1Q6P5S2 330 aa16.45■□□□□ 0.22
USP40-207ENST00000450940 CYP2R1Q6VVX0 501 aa16.45■□□□□ 0.22
USP40-207ENST00000450940 ZNF620Q6ZNG0 422 aa16.45■□□□□ 0.22
USP40-207ENST00000450940 GLCCI1Q86VQ1 547 aa16.45■□□□□ 0.22
USP40-207ENST00000450940 GJC3Q8NFK1 279 aa16.45■□□□□ 0.22
USP40-207ENST00000450940 SLC26A10Q8NG04 563 aa16.45■□□□□ 0.22
USP40-207ENST00000450940 PTP4A1Q93096 173 aa16.45■□□□□ 0.22
USP40-207ENST00000450940 IFT27Q9BW83 186 aa16.45■□□□□ 0.22
USP40-207ENST00000450940 MUC13Q9H3R2 512 aa16.45■□□□□ 0.22
USP40-207ENST00000450940 SRA1Q9HD15 236 aaKnown RBP16.45■□□□□ 0.22
USP40-207ENST00000450940 PURGQ9UJV8 347 aaKnown RBP16.45■□□□□ 0.22
USP40-207ENST00000450940 GRIP1Q9Y3R0 1128 aa16.45■□□□□ 0.22
USP40-207ENST00000450940 WIPI2Q9Y4P8 454 aa16.45■□□□□ 0.22
USP40-207ENST00000450940 DYSFO75923 2080 aa16.45■□□□□ 0.22
USP40-207ENST00000450940 DEAF1O75398 565 aaPredicted RBP16.44■□□□□ 0.22
USP40-207ENST00000450940 GPANK1O95872 356 aa16.44■□□□□ 0.22
USP40-207ENST00000450940 T-ENOLP0DO92 83 aa16.44■□□□□ 0.22
USP40-207ENST00000450940 RGS6P49758 472 aa16.44■□□□□ 0.22
USP40-207ENST00000450940 MVKQ03426 396 aa16.44■□□□□ 0.22
USP40-207ENST00000450940 RSPO1Q2MKA7 263 aaPredicted RBP16.44■□□□□ 0.22
USP40-207ENST00000450940 AVPI1Q5T686 147 aa16.44■□□□□ 0.22
USP40-207ENST00000450940 LCN8Q6JVE9 175 aa16.44■□□□□ 0.22
USP40-207ENST00000450940 JAZF1Q86VZ6 243 aa16.44■□□□□ 0.22
USP40-207ENST00000450940 PHC2Q8IXK0 858 aa16.44■□□□□ 0.22
USP40-207ENST00000450940 OR4C15Q8NGM1 316 aa16.44■□□□□ 0.22
USP40-207ENST00000450940 OR4K13Q8NH42 304 aa16.44■□□□□ 0.22
USP40-207ENST00000450940 RAB1CQ92928 201 aa16.44■□□□□ 0.22
USP40-207ENST00000450940 TMEM186Q96B77 213 aa16.44■□□□□ 0.22
USP40-207ENST00000450940 CMBLQ96DG6 245 aa16.44■□□□□ 0.22
USP40-207ENST00000450940 DDOQ99489 341 aa16.44■□□□□ 0.22
USP40-207ENST00000450940 COQ7Q99807 217 aa16.44■□□□□ 0.22
USP40-207ENST00000450940 HDHD2Q9H0R4 259 aa16.44■□□□□ 0.22
USP40-207ENST00000450940 MAGIXQ9H6Y5 334 aa16.44■□□□□ 0.22
USP40-207ENST00000450940 ZNF665Q9H7R5 613 aa16.44■□□□□ 0.22
USP40-207ENST00000450940 MSL2Q9HCI7 577 aa16.44■□□□□ 0.22
USP40-207ENST00000450940 OR6C68A6NDL8 312 aa16.43■□□□□ 0.22
USP40-207ENST00000450940 TNFRSF11BO00300 401 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms