RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 HMGN3Q15651 99 aa12.16□□□□□ -0.46
SYNGAP1-204ENST00000449372 DCST2Q5T1A1 773 aa12.16□□□□□ -0.46
SYNGAP1-204ENST00000449372 ARHGAP40Q5TG30 622 aa12.16□□□□□ -0.46
SYNGAP1-204ENST00000449372 PWWP2BQ6NUJ5 590 aa12.16□□□□□ -0.46
SYNGAP1-204ENST00000449372 OR52E1Q8NGJ3 308 aa12.16□□□□□ -0.46
SYNGAP1-204ENST00000449372 OR8S1Q8NH09 359 aa12.16□□□□□ -0.46
SYNGAP1-204ENST00000449372 HAVCR1Q96D42 359 aa12.16□□□□□ -0.46
SYNGAP1-204ENST00000449372 CCNL2Q96S94 520 aaPredicted RBP12.16□□□□□ -0.46
SYNGAP1-204ENST00000449372 NDUFAF3Q9BU61 184 aa12.16□□□□□ -0.46
SYNGAP1-204ENST00000449372 ZNF350Q9GZX5 532 aa12.16□□□□□ -0.46
SYNGAP1-204ENST00000449372 SLC25A18Q9H1K4 315 aa12.16□□□□□ -0.46
SYNGAP1-204ENST00000449372 ATG5Q9H1Y0 275 aa12.16□□□□□ -0.46
SYNGAP1-204ENST00000449372 TNRC18O15417 2968 aaPredicted RBP12.16□□□□□ -0.46
SYNGAP1-204ENST00000449372 A0A1B0GTI1 187 aa12.16□□□□□ -0.46
SYNGAP1-204ENST00000449372 H7C417 338 aa12.16□□□□□ -0.46
SYNGAP1-204ENST00000449372 ZNF208O43345 1280 aa12.16□□□□□ -0.46
SYNGAP1-204ENST00000449372 EML2O95834 649 aa12.16□□□□□ -0.46
SYNGAP1-204ENST00000449372 PAX1P15863 534 aa12.16□□□□□ -0.46
SYNGAP1-204ENST00000449372 SRMP19623 302 aa12.16□□□□□ -0.46
SYNGAP1-204ENST00000449372 CEBPEQ15744 281 aa12.16□□□□□ -0.46
SYNGAP1-204ENST00000449372 NKPD1Q17RQ9 610 aa12.16□□□□□ -0.46
SYNGAP1-204ENST00000449372 ZNF793Q6ZN11 406 aa12.16□□□□□ -0.46
SYNGAP1-204ENST00000449372 PRSS58Q8IYP2 241 aa12.16□□□□□ -0.46
SYNGAP1-204ENST00000449372 ACBD4Q8NC06 268 aa12.16□□□□□ -0.46
SYNGAP1-204ENST00000449372 LCN9Q8WX39 176 aa12.16□□□□□ -0.46
SYNGAP1-204ENST00000449372 RERGQ96A58 199 aaPredicted RBP12.16□□□□□ -0.46
SYNGAP1-204ENST00000449372 SDF2Q99470 211 aa12.16□□□□□ -0.46
SYNGAP1-204ENST00000449372 TTTY10Q9BZA0 68 aa12.16□□□□□ -0.46
SYNGAP1-204ENST00000449372 MTFP1Q9UDX5 166 aa12.16□□□□□ -0.46
SYNGAP1-204ENST00000449372 FBXO4Q9UKT5 387 aa12.16□□□□□ -0.46
SYNGAP1-204ENST00000449372 A0A087WV62 115 aa12.15□□□□□ -0.46
SYNGAP1-204ENST00000449372 A0A1W2PPE2 198 aa12.15□□□□□ -0.46
SYNGAP1-204ENST00000449372 PHOX2AO14813 284 aa12.15□□□□□ -0.46
SYNGAP1-204ENST00000449372 SULT1A1P50225 295 aa12.15□□□□□ -0.46
SYNGAP1-204ENST00000449372 ODF4Q2M2E3 257 aa12.15□□□□□ -0.46
SYNGAP1-204ENST00000449372 STPG1Q5TH74 334 aa12.15□□□□□ -0.46
SYNGAP1-204ENST00000449372 LPCAT3Q6P1A2 487 aa12.15□□□□□ -0.46
SYNGAP1-204ENST00000449372 ZNF574Q6ZN55 896 aaPredicted RBP12.15□□□□□ -0.46
SYNGAP1-204ENST00000449372 TTLL10Q6ZVT0 673 aa12.15□□□□□ -0.46
SYNGAP1-204ENST00000449372 ZNF440Q8IYI8 595 aa12.15□□□□□ -0.46
SYNGAP1-204ENST00000449372 SMRP1Q8NCR6 262 aa12.15□□□□□ -0.46
SYNGAP1-204ENST00000449372 OR51A7Q8NH64 312 aa12.15□□□□□ -0.46
SYNGAP1-204ENST00000449372 ZNF417Q8TAU3 575 aa12.15□□□□□ -0.46
SYNGAP1-204ENST00000449372 POTEKPQ9BYX7 375 aa12.15□□□□□ -0.46
SYNGAP1-204ENST00000449372 ADGRL4Q9HBW9 690 aa12.15□□□□□ -0.46
SYNGAP1-204ENST00000449372 C19orf53Q9UNZ5 99 aaPredicted RBP12.15□□□□□ -0.46
SYNGAP1-204ENST00000449372 SIGLEC7Q9Y286 467 aa12.15□□□□□ -0.46
SYNGAP1-204ENST00000449372 TMEM14AQ9Y6G1 99 aa12.15□□□□□ -0.46
SYNGAP1-204ENST00000449372 MDC1Q14676 2089 aaKnown RBP12.15□□□□□ -0.46
SYNGAP1-204ENST00000449372 HSPB2A8KAH6 182 aa12.15□□□□□ -0.46
SYNGAP1-204ENST00000449372 EREGO14944 169 aa12.15□□□□□ -0.46
SYNGAP1-204ENST00000449372 KLF8O95600 359 aaPredicted RBP12.15□□□□□ -0.46
SYNGAP1-204ENST00000449372 EPPINO95925 133 aa12.15□□□□□ -0.46
SYNGAP1-204ENST00000449372 ZNF84P51523 738 aa12.15□□□□□ -0.46
SYNGAP1-204ENST00000449372 ACTBP60709 375 aa12.15□□□□□ -0.46
SYNGAP1-204ENST00000449372 ACTG1P63261 375 aa12.15□□□□□ -0.46
SYNGAP1-204ENST00000449372 HSPB2Q16082 182 aa12.15□□□□□ -0.46
SYNGAP1-204ENST00000449372 MRPL2Q5T653 305 aaKnown RBP12.15□□□□□ -0.46
SYNGAP1-204ENST00000449372 PRAMEF17Q5VTA0 474 aa12.15□□□□□ -0.46
SYNGAP1-204ENST00000449372 BPIFB2Q8N4F0 458 aa12.15□□□□□ -0.46
SYNGAP1-204ENST00000449372 EDAQ92838 391 aa12.15□□□□□ -0.46
SYNGAP1-204ENST00000449372 S100A13Q99584 98 aa12.15□□□□□ -0.46
SYNGAP1-204ENST00000449372 C1orf198Q9H425 327 aa12.15□□□□□ -0.46
SYNGAP1-204ENST00000449372 CLDND1Q9NY35 253 aa12.15□□□□□ -0.46
SYNGAP1-204ENST00000449372 OR5V1Q9UGF6 321 aa12.15□□□□□ -0.46
SYNGAP1-204ENST00000449372 PPP1R2P9O14990 202 aa12.15□□□□□ -0.47
SYNGAP1-204ENST00000449372 AKAIN1P0CW23 69 aa12.15□□□□□ -0.47
SYNGAP1-204ENST00000449372 HOXB2P14652 356 aa12.15□□□□□ -0.47
SYNGAP1-204ENST00000449372 DVL1P1P54792 670 aaPredicted RBP12.15□□□□□ -0.47
SYNGAP1-204ENST00000449372 PRPS1P60891 318 aa12.15□□□□□ -0.47
SYNGAP1-204ENST00000449372 NAAAQ02083 359 aa12.15□□□□□ -0.47
SYNGAP1-204ENST00000449372 MEF2DQ14814 521 aa12.15□□□□□ -0.47
SYNGAP1-204ENST00000449372 TP53I3Q53FA7 332 aa12.15□□□□□ -0.47
SYNGAP1-204ENST00000449372 OLIG3Q7RTU3 272 aa12.15□□□□□ -0.47
SYNGAP1-204ENST00000449372 OR2L3Q8NG85 312 aa12.15□□□□□ -0.47
SYNGAP1-204ENST00000449372 OR7G2Q8NG99 324 aa12.15□□□□□ -0.47
SYNGAP1-204ENST00000449372 OR4K17Q8NGC6 315 aa12.15□□□□□ -0.47
SYNGAP1-204ENST00000449372 OR52E2Q8NGJ4 325 aa12.15□□□□□ -0.47
SYNGAP1-204ENST00000449372 OR13C2Q8NGS9 318 aa12.15□□□□□ -0.47
SYNGAP1-204ENST00000449372 FLVCR1-AS1Q8TAF5 88 aa12.15□□□□□ -0.47
SYNGAP1-204ENST00000449372 POC1BQ8TC44 478 aa12.15□□□□□ -0.47
SYNGAP1-204ENST00000449372 MRGPRX1Q96LB2 322 aa12.15□□□□□ -0.47
SYNGAP1-204ENST00000449372 BMFQ96LC9 184 aa12.15□□□□□ -0.47
SYNGAP1-204ENST00000449372 KIR3DX1Q9H7L2 352 aa12.15□□□□□ -0.47
SYNGAP1-204ENST00000449372 ANKRD10Q9NXR5 420 aa12.15□□□□□ -0.47
SYNGAP1-204ENST00000449372 GPR55Q9Y2T6 319 aaPredicted RBP12.15□□□□□ -0.47
SYNGAP1-204ENST00000449372 LOC100509620A0A075B734 347 aa12.14□□□□□ -0.47
SYNGAP1-204ENST00000449372 TBC1D3DA0A087WVF3 549 aa12.14□□□□□ -0.47
SYNGAP1-204ENST00000449372 TBC1D3IA0A087WXS9 549 aa12.14□□□□□ -0.47
SYNGAP1-204ENST00000449372 PRSS38A1L453 326 aa12.14□□□□□ -0.47
SYNGAP1-204ENST00000449372 A6NCN8 305 aa12.14□□□□□ -0.47
SYNGAP1-204ENST00000449372 MEIS3P1A6NDR6 274 aa12.14□□□□□ -0.47
SYNGAP1-204ENST00000449372 TBC1D3LB9A6J9 549 aa12.14□□□□□ -0.47
SYNGAP1-204ENST00000449372 FBXO24O75426 580 aa12.14□□□□□ -0.47
SYNGAP1-204ENST00000449372 ITPKBP27987 946 aa12.14□□□□□ -0.47
SYNGAP1-204ENST00000449372 CD1CP29017 333 aa12.14□□□□□ -0.47
SYNGAP1-204ENST00000449372 KHDC3LQ587J8 217 aa12.14□□□□□ -0.47
SYNGAP1-204ENST00000449372 COL13A1Q5TAT6 717 aaPredicted RBP12.14□□□□□ -0.47
SYNGAP1-204ENST00000449372 TBC1D3CQ6IPX1 549 aa12.14□□□□□ -0.47
SYNGAP1-204ENST00000449372 TBC1D3Q8IZP1 549 aaPredicted RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms