RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 FITM1A5D6W6 292 aa5.03□□□□□ -1.6
CDC42BPA-209ENST00000448940 ZNHIT1O43257 154 aa5.03□□□□□ -1.6
CDC42BPA-209ENST00000448940 PPP1R3DO95685 299 aa5.03□□□□□ -1.6
CDC42BPA-209ENST00000448940 RAB5BP61020 215 aa5.03□□□□□ -1.6
CDC42BPA-209ENST00000448940 PRR30Q53SZ7 412 aaPredicted RBP5.03□□□□□ -1.6
CDC42BPA-209ENST00000448940 FBXW9Q5XUX1 488 aa5.03□□□□□ -1.6
CDC42BPA-209ENST00000448940 CXorf67Q86X51 503 aaPredicted RBP5.03□□□□□ -1.6
CDC42BPA-209ENST00000448940 INPP5KQ9BT40 448 aa5.03□□□□□ -1.6
CDC42BPA-209ENST00000448940 PRORYQ9H606 182 aa5.03□□□□□ -1.6
CDC42BPA-209ENST00000448940 HRASLSQ9HDD0 168 aa5.03□□□□□ -1.6
CDC42BPA-209ENST00000448940 NAV2Q8IVL1 2488 aa5.03□□□□□ -1.6
CDC42BPA-209ENST00000448940 TLX2O43763 284 aaPredicted RBP5.03□□□□□ -1.6
CDC42BPA-209ENST00000448940 NKX2-2O95096 273 aa5.03□□□□□ -1.6
CDC42BPA-209ENST00000448940 ZNF205O95201 554 aa5.03□□□□□ -1.6
CDC42BPA-209ENST00000448940 ARAFP10398 606 aa5.03□□□□□ -1.6
CDC42BPA-209ENST00000448940 GABRA5P31644 462 aa5.03□□□□□ -1.6
CDC42BPA-209ENST00000448940 ACKR1Q16570 336 aa5.03□□□□□ -1.6
CDC42BPA-209ENST00000448940 NTRK2Q16620 822 aa5.03□□□□□ -1.6
CDC42BPA-209ENST00000448940 DEFB113Q30KQ7 82 aa5.03□□□□□ -1.6
CDC42BPA-209ENST00000448940 ENTPD8Q5MY95 495 aa5.03□□□□□ -1.6
CDC42BPA-209ENST00000448940 DTWD1Q8N5C7 304 aa5.03□□□□□ -1.6
CDC42BPA-209ENST00000448940 PAQR8Q8TEZ7 354 aa5.03□□□□□ -1.6
CDC42BPA-209ENST00000448940 C18orf12Q96KH6 178 aa5.03□□□□□ -1.6
CDC42BPA-209ENST00000448940 NODALQ96S42 347 aa5.03□□□□□ -1.6
CDC42BPA-209ENST00000448940 MEMO1Q9Y316 297 aa5.03□□□□□ -1.6
CDC42BPA-209ENST00000448940 FAM172BPA6NC97 362 aa5.03□□□□□ -1.6
CDC42BPA-209ENST00000448940 G3V2L1 256 aa5.03□□□□□ -1.6
CDC42BPA-209ENST00000448940 DNPH1O43598 174 aa5.03□□□□□ -1.6
CDC42BPA-209ENST00000448940 DIRAS1O95057 198 aa5.03□□□□□ -1.6
CDC42BPA-209ENST00000448940 MPGP29372 298 aa5.03□□□□□ -1.6
CDC42BPA-209ENST00000448940 CDKN2CP42773 168 aa5.03□□□□□ -1.6
CDC42BPA-209ENST00000448940 POU4F2Q12837 409 aa5.03□□□□□ -1.6
CDC42BPA-209ENST00000448940 GTDC1Q4AE62 458 aa5.03□□□□□ -1.6
CDC42BPA-209ENST00000448940 SEZ6L2Q6UXD5 910 aa5.03□□□□□ -1.6
CDC42BPA-209ENST00000448940 OR5K1Q8NHB7 308 aa5.03□□□□□ -1.6
CDC42BPA-209ENST00000448940 CMTM6Q9NX76 183 aa5.03□□□□□ -1.6
CDC42BPA-209ENST00000448940 PRRC2AP48634 2157 aaKnown RBP5.03□□□□□ -1.6
CDC42BPA-209ENST00000448940 CXorf65A6NEN9 183 aa5.03□□□□□ -1.6
CDC42BPA-209ENST00000448940 PDCD5O14737 125 aa5.03□□□□□ -1.6
CDC42BPA-209ENST00000448940 RGS11O94810 467 aa5.03□□□□□ -1.6
CDC42BPA-209ENST00000448940 MBP02144 154 aa5.03□□□□□ -1.6
CDC42BPA-209ENST00000448940 FBP1P09467 338 aa5.03□□□□□ -1.6
CDC42BPA-209ENST00000448940 RBPMS2Q6ZRY4 209 aaKnown RBP5.03□□□□□ -1.6
CDC42BPA-209ENST00000448940 RNF113BQ8IZP6 322 aaKnown RBP5.03□□□□□ -1.6
CDC42BPA-209ENST00000448940 AMER3Q8N944 861 aa5.03□□□□□ -1.6
CDC42BPA-209ENST00000448940 OR13D1Q8NGV5 346 aa5.03□□□□□ -1.6
CDC42BPA-209ENST00000448940 RNF170Q96K19 258 aa5.03□□□□□ -1.6
CDC42BPA-209ENST00000448940 CNN2Q99439 309 aaKnown RBP5.03□□□□□ -1.6
CDC42BPA-209ENST00000448940 URM1Q9BTM9 101 aaKnown RBP5.03□□□□□ -1.6
CDC42BPA-209ENST00000448940 ANGPTL4Q9BY76 406 aa5.03□□□□□ -1.6
CDC42BPA-209ENST00000448940 SDR39U1Q9NRG7 319 aaPredicted RBP5.03□□□□□ -1.6
CDC42BPA-209ENST00000448940 C1RLQ9NZP8 487 aa5.03□□□□□ -1.6
CDC42BPA-209ENST00000448940 SERPINE3A8MV23 424 aa5.03□□□□□ -1.6
CDC42BPA-209ENST00000448940 ARG1P05089 322 aa5.03□□□□□ -1.6
CDC42BPA-209ENST00000448940 THBS1P07996 1170 aa5.03□□□□□ -1.6
CDC42BPA-209ENST00000448940 SLC2A2P11168 524 aaPredicted RBP5.03□□□□□ -1.6
CDC42BPA-209ENST00000448940 ZNF182P17025 639 aaPredicted RBP5.03□□□□□ -1.6
CDC42BPA-209ENST00000448940 RBM34P42696 430 aaKnown RBP5.03□□□□□ -1.6
CDC42BPA-209ENST00000448940 RAB5CP51148 216 aa5.03□□□□□ -1.6
CDC42BPA-209ENST00000448940 SLC37A1P57057 533 aa5.03□□□□□ -1.6
CDC42BPA-209ENST00000448940 WDR4P57081 412 aaKnown RBP5.03□□□□□ -1.6
CDC42BPA-209ENST00000448940 EMX1Q04741 257 aaPredicted RBP5.03□□□□□ -1.6
CDC42BPA-209ENST00000448940 FOCADQ5VW36 1801 aa5.03□□□□□ -1.6
CDC42BPA-209ENST00000448940 C17orf47Q8NEP4 570 aa5.03□□□□□ -1.6
CDC42BPA-209ENST00000448940 CSNK2A3Q8NEV1 391 aa5.03□□□□□ -1.6
CDC42BPA-209ENST00000448940 LIPHQ8WWY8 451 aa5.03□□□□□ -1.6
CDC42BPA-209ENST00000448940 EMG1Q92979 244 aaKnown RBP5.03□□□□□ -1.6
CDC42BPA-209ENST00000448940 MRPL24Q96A35 216 aaKnown RBP5.03□□□□□ -1.6
CDC42BPA-209ENST00000448940 CITED4Q96RK1 184 aa5.03□□□□□ -1.6
CDC42BPA-209ENST00000448940 ZNF184Q99676 751 aaPredicted RBP5.03□□□□□ -1.6
CDC42BPA-209ENST00000448940 PSD2Q9BQI7 771 aa5.03□□□□□ -1.6
CDC42BPA-209ENST00000448940 NTN4Q9HB63 628 aa5.03□□□□□ -1.6
CDC42BPA-209ENST00000448940 SHISA8B8ZZ34 492 aa5.02□□□□□ -1.61
CDC42BPA-209ENST00000448940 J3QLW9 94 aa5.02□□□□□ -1.61
CDC42BPA-209ENST00000448940 ZNF19P17023 458 aa5.02□□□□□ -1.61
CDC42BPA-209ENST00000448940 OR3A4PP47883 348 aa5.02□□□□□ -1.61
CDC42BPA-209ENST00000448940 CCL8P80075 99 aa5.02□□□□□ -1.61
CDC42BPA-209ENST00000448940 PAMR1Q6UXH9 720 aa5.02□□□□□ -1.61
CDC42BPA-209ENST00000448940 OR4K15Q8NH41 348 aa5.02□□□□□ -1.61
CDC42BPA-209ENST00000448940 CRIM1Q9NZV1 1036 aa5.02□□□□□ -1.61
CDC42BPA-209ENST00000448940 NDUFA13Q9P0J0 144 aa5.02□□□□□ -1.61
CDC42BPA-209ENST00000448940 ZNF639Q9UID6 485 aa5.02□□□□□ -1.61
CDC42BPA-209ENST00000448940 OSGIN1Q9UJX0 560 aa5.02□□□□□ -1.61
CDC42BPA-209ENST00000448940 ANKRD36A6QL64 1941 aa5.02□□□□□ -1.61
CDC42BPA-209ENST00000448940 AQP12BA6NM10 295 aa5.02□□□□□ -1.61
CDC42BPA-209ENST00000448940 NCR1O76036 304 aa5.02□□□□□ -1.61
CDC42BPA-209ENST00000448940 AQP8O94778 261 aa5.02□□□□□ -1.61
CDC42BPA-209ENST00000448940 EPPINO95925 133 aa5.02□□□□□ -1.61
CDC42BPA-209ENST00000448940 CD14P08571 375 aa5.02□□□□□ -1.61
CDC42BPA-209ENST00000448940 ZCCHC18P0CG32 403 aa5.02□□□□□ -1.61
CDC42BPA-209ENST00000448940 PEBP1P30086 187 aaKnown RBP5.02□□□□□ -1.61
CDC42BPA-209ENST00000448940 SMCO1Q147U7 214 aa5.02□□□□□ -1.61
CDC42BPA-209ENST00000448940 XKR7Q5GH72 579 aa5.02□□□□□ -1.61
CDC42BPA-209ENST00000448940 NUFIP2Q7Z417 695 aaKnown RBP5.02□□□□□ -1.61
CDC42BPA-209ENST00000448940 AQP12AQ8IXF9 295 aa5.02□□□□□ -1.61
CDC42BPA-209ENST00000448940 SLC30A7Q8NEW0 376 aa5.02□□□□□ -1.61
CDC42BPA-209ENST00000448940 MFSD8Q8NHS3 518 aa5.02□□□□□ -1.61
CDC42BPA-209ENST00000448940 HAVCR1Q96D42 359 aa5.02□□□□□ -1.61
CDC42BPA-209ENST00000448940 OR10A4Q9H209 315 aa5.02□□□□□ -1.61
CDC42BPA-209ENST00000448940 RDH8Q9NYR8 311 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms