RNA–Protein interactions for RNA: ENST00000448649.1

EXOSC3P1-201, Transcript of exosome component 3 pseudogene 1, humanhuman

BASIC

Gene EXOSC3P1, Length 500 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3P1-201ENST00000448649 MEF2BQ02080 365 aaPredicted RBP2.26□□□□□ -2.05
EXOSC3P1-201ENST00000448649 BST1Q10588 318 aa2.26□□□□□ -2.05
EXOSC3P1-201ENST00000448649 NIPA1Q7RTP0 329 aa2.26□□□□□ -2.05
EXOSC3P1-201ENST00000448649 TMEM150AQ86TG1 271 aa2.26□□□□□ -2.05
EXOSC3P1-201ENST00000448649 TMEM256Q8N2U0 113 aa2.26□□□□□ -2.05
EXOSC3P1-201ENST00000448649 NECAB1Q8N987 351 aa2.26□□□□□ -2.05
EXOSC3P1-201ENST00000448649 ST20-AS1Q8NBB2 130 aa2.26□□□□□ -2.05
EXOSC3P1-201ENST00000448649 FRMD8P1Q9BZ68 369 aaPredicted RBP2.26□□□□□ -2.05
EXOSC3P1-201ENST00000448649 ILKAPQ9H0C8 392 aaPredicted RBP2.26□□□□□ -2.05
EXOSC3P1-201ENST00000448649 SLC2A8Q9NY64 477 aa2.26□□□□□ -2.05
EXOSC3P1-201ENST00000448649 PSMC3IPQ9P2W1 217 aaPredicted RBP2.26□□□□□ -2.05
EXOSC3P1-201ENST00000448649 USP47Q96K76 1375 aa2.25□□□□□ -2.05
EXOSC3P1-201ENST00000448649 CST1P01037 141 aa2.25□□□□□ -2.05
EXOSC3P1-201ENST00000448649 SERPINA5P05154 406 aa2.25□□□□□ -2.05
EXOSC3P1-201ENST00000448649 CTSLP07711 333 aa2.25□□□□□ -2.05
EXOSC3P1-201ENST00000448649 PABPC4LP0CB38 370 aaKnown RBP2.25□□□□□ -2.05
EXOSC3P1-201ENST00000448649 ME2P23368 584 aa2.25□□□□□ -2.05
EXOSC3P1-201ENST00000448649 NAA10P41227 235 aaPredicted RBP2.25□□□□□ -2.05
EXOSC3P1-201ENST00000448649 CDKN2DP55273 166 aa2.25□□□□□ -2.05
EXOSC3P1-201ENST00000448649 TAS2R31P59538 309 aa2.25□□□□□ -2.05
EXOSC3P1-201ENST00000448649 CCNA1P78396 465 aa2.25□□□□□ -2.05
EXOSC3P1-201ENST00000448649 FLI1Q01543 452 aaPredicted RBP2.25□□□□□ -2.05
EXOSC3P1-201ENST00000448649 RCAN2Q14206 197 aa2.25□□□□□ -2.05
EXOSC3P1-201ENST00000448649 SSX2Q16385 188 aa2.25□□□□□ -2.05
EXOSC3P1-201ENST00000448649 CERS6Q6ZMG9 384 aa2.25□□□□□ -2.05
EXOSC3P1-201ENST00000448649 KRTAP13-1Q8IUC0 172 aa2.25□□□□□ -2.05
EXOSC3P1-201ENST00000448649 NT5C3BQ969T7 300 aa2.25□□□□□ -2.05
EXOSC3P1-201ENST00000448649 RSG1Q9BU20 258 aa2.25□□□□□ -2.05
EXOSC3P1-201ENST00000448649 GCOM2Q9BZD3 368 aaPredicted RBP2.25□□□□□ -2.05
EXOSC3P1-201ENST00000448649 SLC38A10Q9HBR0 1119 aa2.25□□□□□ -2.05
EXOSC3P1-201ENST00000448649 EXTL2Q9UBQ6 330 aa2.25□□□□□ -2.05
EXOSC3P1-201ENST00000448649 CBY1Q9Y3M2 126 aa2.25□□□□□ -2.05
EXOSC3P1-201ENST00000448649 IGLV1-36A0A0B4J1U3 117 aa2.24□□□□□ -2.05
EXOSC3P1-201ENST00000448649 CDC40O60508 579 aaKnown RBP eCLIP2.24□□□□□ -2.05
EXOSC3P1-201ENST00000448649 RDH16O75452 317 aa2.24□□□□□ -2.05
EXOSC3P1-201ENST00000448649 SLC22A5O76082 557 aa2.24□□□□□ -2.05
EXOSC3P1-201ENST00000448649 SEMA3DO95025 777 aa2.24□□□□□ -2.05
EXOSC3P1-201ENST00000448649 KIR3DL2P43630 455 aa2.24□□□□□ -2.05
EXOSC3P1-201ENST00000448649 TNNT2P45379 298 aaPredicted RBP2.24□□□□□ -2.05
EXOSC3P1-201ENST00000448649 TMED10P49755 219 aaKnown RBP2.24□□□□□ -2.05
EXOSC3P1-201ENST00000448649 SYNJ2BPP57105 145 aa2.24□□□□□ -2.05
EXOSC3P1-201ENST00000448649 PPP1R7Q15435 360 aa2.24□□□□□ -2.05
EXOSC3P1-201ENST00000448649 SPINT4Q6UDR6 99 aa2.24□□□□□ -2.05
EXOSC3P1-201ENST00000448649 TMEM107Q6UX40 140 aa2.24□□□□□ -2.05
EXOSC3P1-201ENST00000448649 TBC1D21Q8IYX1 336 aa2.24□□□□□ -2.05
EXOSC3P1-201ENST00000448649 COX18Q8N8Q8 333 aa2.24□□□□□ -2.05
EXOSC3P1-201ENST00000448649 TMEM105Q8N8V8 129 aa2.24□□□□□ -2.05
EXOSC3P1-201ENST00000448649 DCPSQ96C86 337 aaKnown RBP2.24□□□□□ -2.05
EXOSC3P1-201ENST00000448649 MICU1Q9BPX6 476 aa2.24□□□□□ -2.05
EXOSC3P1-201ENST00000448649 FGF23Q9GZV9 251 aaPredicted RBP2.24□□□□□ -2.05
EXOSC3P1-201ENST00000448649 TMEM9BQ9NQ34 198 aa2.24□□□□□ -2.05
EXOSC3P1-201ENST00000448649 UXTQ9UBK9 157 aaPredicted RBP2.24□□□□□ -2.05
EXOSC3P1-201ENST00000448649 IGKV2-24A0A0C4DH68 120 aa2.23□□□□□ -2.05
EXOSC3P1-201ENST00000448649 FAM47DPA6NHR8 397 aa2.23□□□□□ -2.05
EXOSC3P1-201ENST00000448649 LYRM9A8MSI8 78 aa2.23□□□□□ -2.05
EXOSC3P1-201ENST00000448649 L7N2F9 121 aa2.23□□□□□ -2.05
EXOSC3P1-201ENST00000448649 RAB29O14966 203 aa2.23□□□□□ -2.05
EXOSC3P1-201ENST00000448649 ERGP11308 486 aa2.23□□□□□ -2.05
EXOSC3P1-201ENST00000448649 CDH6P55285 790 aa2.23□□□□□ -2.05
EXOSC3P1-201ENST00000448649 PPP1CBP62140 327 aa2.23□□□□□ -2.05
EXOSC3P1-201ENST00000448649 CDK5Q00535 292 aa2.23□□□□□ -2.05
EXOSC3P1-201ENST00000448649 ADNP2Q6IQ32 1131 aa2.23□□□□□ -2.05
EXOSC3P1-201ENST00000448649 RNASEKQ6P5S7 137 aaKnown RBP2.23□□□□□ -2.05
EXOSC3P1-201ENST00000448649 Q6ZSR3 168 aa2.23□□□□□ -2.05
EXOSC3P1-201ENST00000448649 ZFP41Q8N8Y5 198 aa2.23□□□□□ -2.05
EXOSC3P1-201ENST00000448649 SPANXA2-OT1Q8N9U9 137 aa2.23□□□□□ -2.05
EXOSC3P1-201ENST00000448649 TTLQ8NG68 377 aa2.23□□□□□ -2.05
EXOSC3P1-201ENST00000448649 OR9K2Q8NGE7 335 aa2.23□□□□□ -2.05
EXOSC3P1-201ENST00000448649 OR5B3Q8NH48 314 aa2.23□□□□□ -2.05
EXOSC3P1-201ENST00000448649 OR5B12Q96R08 314 aa2.23□□□□□ -2.05
EXOSC3P1-201ENST00000448649 EDA2RQ9HAV5 297 aa2.23□□□□□ -2.05
EXOSC3P1-201ENST00000448649 LGALS13Q9UHV8 139 aa2.23□□□□□ -2.05
EXOSC3P1-201ENST00000448649 CSDC2Q9Y534 153 aaKnown RBP2.23□□□□□ -2.05
EXOSC3P1-201ENST00000448649 SCN1AP35498 2009 aa2.23□□□□□ -2.05
EXOSC3P1-201ENST00000448649 PALLDQ8WX93 1383 aa2.23□□□□□ -2.05
EXOSC3P1-201ENST00000448649 DOCK8Q8NF50 2099 aa2.22□□□□□ -2.05
EXOSC3P1-201ENST00000448649 COL5A1P20908 1838 aaPredicted RBP2.22□□□□□ -2.05
EXOSC3P1-201ENST00000448649 IGHV3OR16-8A0A075B7F1 116 aa2.22□□□□□ -2.05
EXOSC3P1-201ENST00000448649 C5orf63A6NC05 138 aa2.22□□□□□ -2.05
EXOSC3P1-201ENST00000448649 ZNF98A6NK75 572 aa2.22□□□□□ -2.05
EXOSC3P1-201ENST00000448649 AIM2O14862 343 aa2.22□□□□□ -2.05
EXOSC3P1-201ENST00000448649 H6PDO95479 791 aa2.22□□□□□ -2.05
EXOSC3P1-201ENST00000448649 ZNF24P17028 368 aa2.22□□□□□ -2.05
EXOSC3P1-201ENST00000448649 GGT1P19440 569 aa2.22□□□□□ -2.05
EXOSC3P1-201ENST00000448649 HNRNPH3P31942 346 aaKnown RBP2.22□□□□□ -2.05
EXOSC3P1-201ENST00000448649 TNFSF9P41273 254 aa2.22□□□□□ -2.05
EXOSC3P1-201ENST00000448649 STXBP1P61764 594 aaKnown RBP2.22□□□□□ -2.05
EXOSC3P1-201ENST00000448649 FUT5Q11128 374 aa2.22□□□□□ -2.05
EXOSC3P1-201ENST00000448649 TAF9Q16594 264 aa2.22□□□□□ -2.05
EXOSC3P1-201ENST00000448649 RNASE13Q5GAN3 156 aaKnown RBP2.22□□□□□ -2.05
EXOSC3P1-201ENST00000448649 FAM222AQ5U5X8 452 aa2.22□□□□□ -2.05
EXOSC3P1-201ENST00000448649 UBE2UQ5VVX9 321 aa2.22□□□□□ -2.05
EXOSC3P1-201ENST00000448649 H3F3CQ6NXT2 135 aa2.22□□□□□ -2.05
EXOSC3P1-201ENST00000448649 ZNF547Q8IVP9 402 aa2.22□□□□□ -2.05
EXOSC3P1-201ENST00000448649 PRELID2Q8N945 189 aa2.22□□□□□ -2.05
EXOSC3P1-201ENST00000448649 CHST4Q8NCG5 386 aa2.22□□□□□ -2.05
EXOSC3P1-201ENST00000448649 TMEM104Q8NE00 496 aa2.22□□□□□ -2.05
EXOSC3P1-201ENST00000448649 OR13C2Q8NGS9 318 aa2.22□□□□□ -2.05
EXOSC3P1-201ENST00000448649 OR1P1Q8NH06 330 aa2.22□□□□□ -2.05
EXOSC3P1-201ENST00000448649 LRRC29Q8WV35 223 aa2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms