RNA–Protein interactions for RNA: ENST00000448428.1

PRPF40A-203, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 5

Gene PRPF40A, Length 490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-203ENST00000448428 TEKQ02763 1124 aa10.88□□□□□ -0.67
PRPF40A-203ENST00000448428 GLO1Q04760 184 aa10.88□□□□□ -0.67
PRPF40A-203ENST00000448428 FLOT2Q14254 428 aa10.88□□□□□ -0.67
PRPF40A-203ENST00000448428 MOGQ16653 247 aa10.88□□□□□ -0.67
PRPF40A-203ENST00000448428 MBNL2Q5VZF2 373 aaKnown RBP10.88□□□□□ -0.67
PRPF40A-203ENST00000448428 CYB5R2Q6BCY4 276 aa10.88□□□□□ -0.67
PRPF40A-203ENST00000448428 TMEM154Q6P9G4 183 aa10.88□□□□□ -0.67
PRPF40A-203ENST00000448428 CORO6Q6QEF8 472 aa10.88□□□□□ -0.67
PRPF40A-203ENST00000448428 ARL9Q6T311 187 aa10.88□□□□□ -0.67
PRPF40A-203ENST00000448428 TMEM179BQ7Z7N9 219 aa10.88□□□□□ -0.67
PRPF40A-203ENST00000448428 LNX2Q8N448 690 aa10.88□□□□□ -0.67
PRPF40A-203ENST00000448428 CYB561A3Q8NBI2 242 aa10.88□□□□□ -0.67
PRPF40A-203ENST00000448428 OR1F12Q8NHA8 337 aa10.88□□□□□ -0.67
PRPF40A-203ENST00000448428 GIPC3Q8TF64 312 aa10.88□□□□□ -0.67
PRPF40A-203ENST00000448428 IPCEF1Q8WWN9 437 aaPredicted RBP10.88□□□□□ -0.67
PRPF40A-203ENST00000448428 RDH5Q92781 318 aa10.88□□□□□ -0.67
PRPF40A-203ENST00000448428 YIPF5Q969M3 257 aa10.88□□□□□ -0.67
PRPF40A-203ENST00000448428 FEVQ99581 238 aa10.88□□□□□ -0.67
PRPF40A-203ENST00000448428 TSSK6Q9BXA6 273 aa10.88□□□□□ -0.67
PRPF40A-203ENST00000448428 CADM1Q9BY67 442 aaKnown RBP10.88□□□□□ -0.67
PRPF40A-203ENST00000448428 TBCCD1Q9NVR7 557 aa10.88□□□□□ -0.67
PRPF40A-203ENST00000448428 GRIP1Q9Y3R0 1128 aa10.88□□□□□ -0.67
PRPF40A-203ENST00000448428 HIVEP2P31629 2446 aa10.88□□□□□ -0.67
PRPF40A-203ENST00000448428 ZFHX3Q15911 3703 aa10.88□□□□□ -0.67
PRPF40A-203ENST00000448428 TLN2Q9Y4G6 2542 aa10.88□□□□□ -0.67
PRPF40A-203ENST00000448428 NIPBLQ6KC79 2804 aaeCLIP10.87□□□□□ -0.67
PRPF40A-203ENST00000448428 TCRBV3S1A0A5B6 114 aa10.87□□□□□ -0.67
PRPF40A-203ENST00000448428 LRP5LA4QPB2 252 aa10.87□□□□□ -0.67
PRPF40A-203ENST00000448428 LILRA1O75019 489 aa10.87□□□□□ -0.67
PRPF40A-203ENST00000448428 CRLF1O75462 422 aa10.87□□□□□ -0.67
PRPF40A-203ENST00000448428 SOX14O95416 240 aa10.87□□□□□ -0.67
PRPF40A-203ENST00000448428 ABHD16AO95870 558 aa10.87□□□□□ -0.67
PRPF40A-203ENST00000448428 ZNF23P17027 643 aa10.87□□□□□ -0.67
PRPF40A-203ENST00000448428 ARHGDIAP52565 204 aa10.87□□□□□ -0.67
PRPF40A-203ENST00000448428 CCL8P80075 99 aa10.87□□□□□ -0.67
PRPF40A-203ENST00000448428 COX10Q12887 443 aa10.87□□□□□ -0.67
PRPF40A-203ENST00000448428 GK3PQ14409 553 aa10.87□□□□□ -0.67
PRPF40A-203ENST00000448428 KRTAP21-3Q3LHN1 58 aa10.87□□□□□ -0.67
PRPF40A-203ENST00000448428 SPATA24Q86W54 205 aa10.87□□□□□ -0.67
PRPF40A-203ENST00000448428 GJC3Q8NFK1 279 aa10.87□□□□□ -0.67
PRPF40A-203ENST00000448428 OR10G2Q8NGC3 310 aa10.87□□□□□ -0.67
PRPF40A-203ENST00000448428 OR4Q3Q8NH05 313 aa10.87□□□□□ -0.67
PRPF40A-203ENST00000448428 SNX33Q8WV41 574 aa10.87□□□□□ -0.67
PRPF40A-203ENST00000448428 ZNRF4Q8WWF5 429 aa10.87□□□□□ -0.67
PRPF40A-203ENST00000448428 NIPSNAP1Q9BPW8 284 aa10.87□□□□□ -0.67
PRPF40A-203ENST00000448428 POFUT1Q9H488 388 aa10.87□□□□□ -0.67
PRPF40A-203ENST00000448428 TBC1D23Q9NUY8 699 aa10.87□□□□□ -0.67
PRPF40A-203ENST00000448428 NKIRAS2Q9NYR9 191 aa10.87□□□□□ -0.67
PRPF40A-203ENST00000448428 KLHL21Q9UJP4 597 aa10.87□□□□□ -0.67
PRPF40A-203ENST00000448428 POLR1DQ9Y2S0 133 aa10.87□□□□□ -0.67
PRPF40A-203ENST00000448428 STARD10Q9Y365 291 aa10.87□□□□□ -0.67
PRPF40A-203ENST00000448428 MALRD1Q5VYJ5 2156 aa10.87□□□□□ -0.67
PRPF40A-203ENST00000448428 NF1P21359 2839 aa10.87□□□□□ -0.67
PRPF40A-203ENST00000448428 A8MV72 311 aaPredicted RBP10.86□□□□□ -0.67
PRPF40A-203ENST00000448428 H3BSA7 217 aa10.86□□□□□ -0.67
PRPF40A-203ENST00000448428 GNGT2O14610 69 aa10.86□□□□□ -0.67
PRPF40A-203ENST00000448428 HLA-DQA2P01906 255 aa10.86□□□□□ -0.67
PRPF40A-203ENST00000448428 DBHP09172 617 aa10.86□□□□□ -0.67
PRPF40A-203ENST00000448428 TACSTD2P09758 323 aa10.86□□□□□ -0.67
PRPF40A-203ENST00000448428 HOXB6P17509 224 aaKnown RBP10.86□□□□□ -0.67
PRPF40A-203ENST00000448428 ACHEP22303 614 aa10.86□□□□□ -0.67
PRPF40A-203ENST00000448428 PYCR1P32322 319 aa10.86□□□□□ -0.67
PRPF40A-203ENST00000448428 GGT2P36268 569 aa10.86□□□□□ -0.67
PRPF40A-203ENST00000448428 ERFP50548 548 aa10.86□□□□□ -0.67
PRPF40A-203ENST00000448428 ZNF81P51508 661 aa10.86□□□□□ -0.67
PRPF40A-203ENST00000448428 MMP15P51511 669 aa10.86□□□□□ -0.67
PRPF40A-203ENST00000448428 PSG7Q13046 419 aa10.86□□□□□ -0.67
PRPF40A-203ENST00000448428 TRIP10Q15642 601 aa10.86□□□□□ -0.67
PRPF40A-203ENST00000448428 TSTQ16762 297 aaKnown RBP10.86□□□□□ -0.67
PRPF40A-203ENST00000448428 RSPO1Q2MKA7 263 aaPredicted RBP10.86□□□□□ -0.67
PRPF40A-203ENST00000448428 PCGF3Q3KNV8 242 aa10.86□□□□□ -0.67
PRPF40A-203ENST00000448428 SLC36A3Q495N2 470 aa10.86□□□□□ -0.67
PRPF40A-203ENST00000448428 C6orf52Q5T4I8 152 aa10.86□□□□□ -0.67
PRPF40A-203ENST00000448428 SLC18B1Q6NT16 456 aa10.86□□□□□ -0.67
PRPF40A-203ENST00000448428 CD300LDQ6UXZ3 194 aa10.86□□□□□ -0.67
PRPF40A-203ENST00000448428 LINC00346Q8IVM7 164 aa10.86□□□□□ -0.67
PRPF40A-203ENST00000448428 SLC37A3Q8NCC5 494 aa10.86□□□□□ -0.67
PRPF40A-203ENST00000448428 PAPD5Q8NDF8 572 aaKnown RBP10.86□□□□□ -0.67
PRPF40A-203ENST00000448428 SLCO4A1Q96BD0 722 aa10.86□□□□□ -0.67
PRPF40A-203ENST00000448428 RBM4Q9BWF3 364 aaKnown RBP10.86□□□□□ -0.67
PRPF40A-203ENST00000448428 CDADC1Q9BWV3 514 aa10.86□□□□□ -0.67
PRPF40A-203ENST00000448428 CHODLQ9H9P2 273 aa10.86□□□□□ -0.67
PRPF40A-203ENST00000448428 ARMC1Q9NVT9 282 aa10.86□□□□□ -0.67
PRPF40A-203ENST00000448428 MRPL22Q9NWU5 206 aaKnown RBP10.86□□□□□ -0.67
PRPF40A-203ENST00000448428 PDP1Q9P0J1 537 aaPredicted RBP10.86□□□□□ -0.67
PRPF40A-203ENST00000448428 BAIAP2Q9UQB8 552 aa10.86□□□□□ -0.67
PRPF40A-203ENST00000448428 NSD1Q96L73 2696 aaPredicted RBP10.85□□□□□ -0.67
PRPF40A-203ENST00000448428 ARRDC5A6NEK1 342 aa10.85□□□□□ -0.67
PRPF40A-203ENST00000448428 ZSCAN5BA6NJL1 495 aa10.85□□□□□ -0.67
PRPF40A-203ENST00000448428 CDC14BO60729 498 aa10.85□□□□□ -0.67
PRPF40A-203ENST00000448428 FKBP6O75344 327 aa10.85□□□□□ -0.67
PRPF40A-203ENST00000448428 MT-ND5P03915 603 aa10.85□□□□□ -0.67
PRPF40A-203ENST00000448428 TUBG1P23258 451 aa10.85□□□□□ -0.67
PRPF40A-203ENST00000448428 IL2RGP31785 369 aa10.85□□□□□ -0.67
PRPF40A-203ENST00000448428 GZMKP49863 264 aa10.85□□□□□ -0.67
PRPF40A-203ENST00000448428 CHN2P52757 468 aa10.85□□□□□ -0.67
PRPF40A-203ENST00000448428 TMEM33P57088 247 aa10.85□□□□□ -0.67
PRPF40A-203ENST00000448428 MRPS11P82912 194 aaKnown RBP10.85□□□□□ -0.67
PRPF40A-203ENST00000448428 CBX1P83916 185 aa10.85□□□□□ -0.67
PRPF40A-203ENST00000448428 CFAP77Q6ZQR2 320 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms