RNA–Protein interactions for RNA: ENST00000447986.5

ERGIC3-209, Transcript of ERGIC and golgi 3, humanhuman

TSL 1 (best)

Gene ERGIC3, Length 1,632 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-209ENST00000447986 OR8J1Q8NGP2 316 aa11.31□□□□□ -0.6
ERGIC3-209ENST00000447986 OR1F12Q8NHA8 337 aa11.31□□□□□ -0.6
ERGIC3-209ENST00000447986 ZNRF4Q8WWF5 429 aa11.31□□□□□ -0.6
ERGIC3-209ENST00000447986 IPCEF1Q8WWN9 437 aaPredicted RBP11.31□□□□□ -0.6
ERGIC3-209ENST00000447986 HRASLS5Q96KN8 279 aa11.31□□□□□ -0.6
ERGIC3-209ENST00000447986 PITX2Q99697 317 aa11.31□□□□□ -0.6
ERGIC3-209ENST00000447986 SLC29A1Q99808 456 aa11.31□□□□□ -0.6
ERGIC3-209ENST00000447986 GRIP2Q9C0E4 1043 aa11.31□□□□□ -0.6
ERGIC3-209ENST00000447986 VCXQ9H320 206 aa11.31□□□□□ -0.6
ERGIC3-209ENST00000447986 ELOVL3Q9HB03 270 aa11.31□□□□□ -0.6
ERGIC3-209ENST00000447986 CBLN4Q9NTU7 201 aa11.31□□□□□ -0.6
ERGIC3-209ENST00000447986 GDF2Q9UK05 429 aaPredicted RBP11.31□□□□□ -0.6
ERGIC3-209ENST00000447986 FBXO9Q9UK97 447 aaPredicted RBP11.31□□□□□ -0.6
ERGIC3-209ENST00000447986 CMAHPQ9Y471 501 aa11.31□□□□□ -0.6
ERGIC3-209ENST00000447986 CACNA1DQ01668 2161 aa11.3□□□□□ -0.6
ERGIC3-209ENST00000447986 ZNF593O00488 134 aaPredicted RBP11.3□□□□□ -0.6
ERGIC3-209ENST00000447986 SYNGR3O43761 229 aa11.3□□□□□ -0.6
ERGIC3-209ENST00000447986 OR4A8P0C604 315 aa11.3□□□□□ -0.6
ERGIC3-209ENST00000447986 FAM157BP0CG42 384 aa11.3□□□□□ -0.6
ERGIC3-209ENST00000447986 SERPINF1P36955 418 aa11.3□□□□□ -0.6
ERGIC3-209ENST00000447986 UCP2P55851 309 aa11.3□□□□□ -0.6
ERGIC3-209ENST00000447986 HIST1H3AP68431 136 aa11.3□□□□□ -0.6
ERGIC3-209ENST00000447986 NKX6-1P78426 367 aaPredicted RBP11.3□□□□□ -0.6
ERGIC3-209ENST00000447986 APOFQ13790 326 aa11.3□□□□□ -0.6
ERGIC3-209ENST00000447986 DEFB113Q30KQ7 82 aa11.3□□□□□ -0.6
ERGIC3-209ENST00000447986 CCDC92Q53HC0 331 aaPredicted RBP11.3□□□□□ -0.6
ERGIC3-209ENST00000447986 HIST2H3PS2Q5TEC6 136 aa11.3□□□□□ -0.6
ERGIC3-209ENST00000447986 TMEM154Q6P9G4 183 aa11.3□□□□□ -0.6
ERGIC3-209ENST00000447986 HIST2H3AQ71DI3 136 aa11.3□□□□□ -0.6
ERGIC3-209ENST00000447986 DTX2Q86UW9 622 aa11.3□□□□□ -0.6
ERGIC3-209ENST00000447986 ERI1Q8IV48 349 aaKnown RBP11.3□□□□□ -0.6
ERGIC3-209ENST00000447986 GID4Q8IVV7 300 aa11.3□□□□□ -0.6
ERGIC3-209ENST00000447986 PACRGLQ8N7B6 248 aa11.3□□□□□ -0.6
ERGIC3-209ENST00000447986 ZNF555Q8NEP9 628 aa11.3□□□□□ -0.6
ERGIC3-209ENST00000447986 OR6N2Q8NGY6 317 aa11.3□□□□□ -0.6
ERGIC3-209ENST00000447986 FAM81AQ8TBF8 368 aa11.3□□□□□ -0.6
ERGIC3-209ENST00000447986 TRUB1Q8WWH5 349 aaKnown RBP11.3□□□□□ -0.6
ERGIC3-209ENST00000447986 ZMYND19Q96E35 227 aaPredicted RBP11.3□□□□□ -0.6
ERGIC3-209ENST00000447986 IL4I1Q96RQ9 567 aa11.3□□□□□ -0.6
ERGIC3-209ENST00000447986 DCLRE1CQ96SD1 692 aaKnown RBP11.3□□□□□ -0.6
ERGIC3-209ENST00000447986 COQ7Q99807 217 aa11.3□□□□□ -0.6
ERGIC3-209ENST00000447986 ATF6BQ99941 703 aa11.3□□□□□ -0.6
ERGIC3-209ENST00000447986 TOR3AQ9H497 397 aa11.3□□□□□ -0.6
ERGIC3-209ENST00000447986 WDR76Q9H967 626 aa11.3□□□□□ -0.6
ERGIC3-209ENST00000447986 BEX4Q9NWD9 120 aaPredicted RBP11.3□□□□□ -0.6
ERGIC3-209ENST00000447986 SMPD3Q9NY59 655 aaPredicted RBP11.3□□□□□ -0.6
ERGIC3-209ENST00000447986 PRR14LQ5THK1 2151 aa11.29□□□□□ -0.6
ERGIC3-209ENST00000447986 LOC100509620A0A075B734 347 aa11.29□□□□□ -0.6
ERGIC3-209ENST00000447986 SLC22A31A6NKX4 558 aa11.29□□□□□ -0.6
ERGIC3-209ENST00000447986 CYSRT1A8MQ03 144 aa11.29□□□□□ -0.6
ERGIC3-209ENST00000447986 B9A039 149 aa11.29□□□□□ -0.6
ERGIC3-209ENST00000447986 SMPD2O60906 423 aa11.29□□□□□ -0.6
ERGIC3-209ENST00000447986 ABHD16AO95870 558 aa11.29□□□□□ -0.6
ERGIC3-209ENST00000447986 LCKP06239 509 aa11.29□□□□□ -0.6
ERGIC3-209ENST00000447986 SOD3P08294 240 aa11.29□□□□□ -0.6
ERGIC3-209ENST00000447986 THBS4P35443 961 aa11.29□□□□□ -0.6
ERGIC3-209ENST00000447986 SELENOVP59797 346 aa11.29□□□□□ -0.6
ERGIC3-209ENST00000447986 SNRPD2P62316 118 aaKnown RBP11.29□□□□□ -0.6
ERGIC3-209ENST00000447986 ADIPOQQ15848 244 aa11.29□□□□□ -0.6
ERGIC3-209ENST00000447986 PCK2Q16822 640 aa11.29□□□□□ -0.6
ERGIC3-209ENST00000447986 RGS7BPQ6MZT1 257 aaPredicted RBP11.29□□□□□ -0.6
ERGIC3-209ENST00000447986 LYPD4Q6UWN0 246 aa11.29□□□□□ -0.6
ERGIC3-209ENST00000447986 CFAP77Q6ZQR2 320 aa11.29□□□□□ -0.6
ERGIC3-209ENST00000447986 DCXRQ7Z4W1 244 aa11.29□□□□□ -0.6
ERGIC3-209ENST00000447986 MBD6Q96DN6 1003 aa11.29□□□□□ -0.6
ERGIC3-209ENST00000447986 TRMT61AQ96FX7 289 aaKnown RBP11.29□□□□□ -0.6
ERGIC3-209ENST00000447986 C4orf45Q96LM5 186 aa11.29□□□□□ -0.6
ERGIC3-209ENST00000447986 DMRTB1Q96MA1 342 aa11.29□□□□□ -0.6
ERGIC3-209ENST00000447986 COG8Q96MW5 612 aa11.29□□□□□ -0.6
ERGIC3-209ENST00000447986 TEAD3Q99594 435 aa11.29□□□□□ -0.6
ERGIC3-209ENST00000447986 TRAF4Q9BUZ4 470 aaPredicted RBP11.29□□□□□ -0.6
ERGIC3-209ENST00000447986 PLK3Q9H4B4 646 aa11.29□□□□□ -0.6
ERGIC3-209ENST00000447986 MARCH7Q9H992 704 aa11.29□□□□□ -0.6
ERGIC3-209ENST00000447986 GMPPBQ9Y5P6 360 aa11.29□□□□□ -0.6
ERGIC3-209ENST00000447986 PMF1-BGLAPU3KQ54 211 aa11.29□□□□□ -0.6
ERGIC3-209ENST00000447986 J3QW42 95 aa11.28□□□□□ -0.6
ERGIC3-209ENST00000447986 CASQ2O14958 399 aaPredicted RBP11.28□□□□□ -0.6
ERGIC3-209ENST00000447986 SLC2A5P22732 501 aa11.28□□□□□ -0.6
ERGIC3-209ENST00000447986 PEX2P28328 305 aa11.28□□□□□ -0.6
ERGIC3-209ENST00000447986 RPS27P42677 84 aaKnown RBP11.28□□□□□ -0.6
ERGIC3-209ENST00000447986 SLC15A1P46059 708 aa11.28□□□□□ -0.6
ERGIC3-209ENST00000447986 RGS6P49758 472 aa11.28□□□□□ -0.6
ERGIC3-209ENST00000447986 EFNB1P98172 346 aa11.28□□□□□ -0.6
ERGIC3-209ENST00000447986 SLC34A1Q06495 639 aa11.28□□□□□ -0.6
ERGIC3-209ENST00000447986 TAF13Q15543 124 aa11.28□□□□□ -0.6
ERGIC3-209ENST00000447986 LPCAT4Q643R3 524 aa11.28□□□□□ -0.6
ERGIC3-209ENST00000447986 MEPCEQ7L2J0 689 aaKnown RBP11.28□□□□□ -0.6
ERGIC3-209ENST00000447986 DPY19L4Q7Z388 723 aa11.28□□□□□ -0.6
ERGIC3-209ENST00000447986 GALNT4Q8N4A0 578 aa11.28□□□□□ -0.6
ERGIC3-209ENST00000447986 PAQR4Q8N4S7 273 aaPredicted RBP11.28□□□□□ -0.6
ERGIC3-209ENST00000447986 BBS1Q8NFJ9 593 aa11.28□□□□□ -0.6
ERGIC3-209ENST00000447986 OR1J1Q8NGS3 322 aa11.28□□□□□ -0.6
ERGIC3-209ENST00000447986 RFKQ969G6 155 aa11.28□□□□□ -0.6
ERGIC3-209ENST00000447986 SPTSSAQ969W0 71 aa11.28□□□□□ -0.6
ERGIC3-209ENST00000447986 OR51B6Q9H340 312 aa11.28□□□□□ -0.6
ERGIC3-209ENST00000447986 TBCCD1Q9NVR7 557 aa11.28□□□□□ -0.6
ERGIC3-209ENST00000447986 GRIP1Q9Y3R0 1128 aa11.28□□□□□ -0.6
ERGIC3-209ENST00000447986 ABCA4P78363 2273 aa11.28□□□□□ -0.6
ERGIC3-209ENST00000447986 SNTNA6NMZ2 147 aa11.27□□□□□ -0.6
ERGIC3-209ENST00000447986 ZNF878C9JN71 531 aa11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms