RNA–Protein interactions for RNA: ENST00000447654.5

HMGA1-205, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-205ENST00000447654 NKX6-1P78426 367 aaPredicted RBP17.31■□□□□ 0.36
HMGA1-205ENST00000447654 ZNF385CQ66K41 422 aaPredicted RBP17.31■□□□□ 0.36
HMGA1-205ENST00000447654 OR10J5Q8NHC4 309 aa17.31■□□□□ 0.36
HMGA1-205ENST00000447654 RNASEH2CQ8TDP1 164 aaKnown RBP17.31■□□□□ 0.36
HMGA1-205ENST00000447654 MR1Q95460 341 aa17.31■□□□□ 0.36
HMGA1-205ENST00000447654 PTCHD1Q96NR3 888 aa17.31■□□□□ 0.36
HMGA1-205ENST00000447654 NRTNQ99748 197 aa17.31■□□□□ 0.36
HMGA1-205ENST00000447654 SLC23A2Q9UGH3 650 aa17.31■□□□□ 0.36
HMGA1-205ENST00000447654 MRPS33Q9Y291 106 aaKnown RBP17.31■□□□□ 0.36
HMGA1-205ENST00000447654 NTNG1Q9Y2I2 539 aa17.31■□□□□ 0.36
HMGA1-205ENST00000447654 A0A087WWC5 75 aa17.3■□□□□ 0.36
HMGA1-205ENST00000447654 LOC100289279A0A1B0GTE1 492 aa17.3■□□□□ 0.36
HMGA1-205ENST00000447654 C5orf51A6NDU8 294 aa17.3■□□□□ 0.36
HMGA1-205ENST00000447654 PRAMEF26H0Y7S4 382 aa17.3■□□□□ 0.36
HMGA1-205ENST00000447654 DOK2O60496 412 aa17.3■□□□□ 0.36
HMGA1-205ENST00000447654 CST4P01036 141 aa17.3■□□□□ 0.36
HMGA1-205ENST00000447654 NR2C1P13056 603 aa17.3■□□□□ 0.36
HMGA1-205ENST00000447654 IGFALSP35858 605 aa17.3■□□□□ 0.36
HMGA1-205ENST00000447654 PSMB10P40306 273 aa17.3■□□□□ 0.36
HMGA1-205ENST00000447654 DIO1P49895 249 aa17.3■□□□□ 0.36
HMGA1-205ENST00000447654 TAS2R31P59538 309 aa17.3■□□□□ 0.36
HMGA1-205ENST00000447654 CLN3Q13286 438 aa17.3■□□□□ 0.36
HMGA1-205ENST00000447654 JOSD1Q15040 202 aaPredicted RBP17.3■□□□□ 0.36
HMGA1-205ENST00000447654 UBE2V2Q15819 145 aa17.3■□□□□ 0.36
HMGA1-205ENST00000447654 MOGAT2Q3SYC2 334 aa17.3■□□□□ 0.36
HMGA1-205ENST00000447654 SLC22A25Q6T423 547 aa17.3■□□□□ 0.36
HMGA1-205ENST00000447654 FAM129CQ86XR2 697 aa17.3■□□□□ 0.36
HMGA1-205ENST00000447654 WFIKKN2Q8TEU8 576 aa17.3■□□□□ 0.36
HMGA1-205ENST00000447654 OR7D2Q96RA2 312 aa17.3■□□□□ 0.36
HMGA1-205ENST00000447654 ZNF443Q9Y2A4 671 aaPredicted RBP17.3■□□□□ 0.36
HMGA1-205ENST00000447654 COL4A3Q01955 1670 aa17.3■□□□□ 0.36
HMGA1-205ENST00000447654 A0A1B0GW64 132 aa17.3■□□□□ 0.36
HMGA1-205ENST00000447654 HIST1H2BKO60814 126 aa17.3■□□□□ 0.36
HMGA1-205ENST00000447654 TSPAN15O95858 294 aa17.3■□□□□ 0.36
HMGA1-205ENST00000447654 HIST1H2BJP06899 126 aa17.3■□□□□ 0.36
HMGA1-205ENST00000447654 OR8G3PP0DMU2 310 aa17.3■□□□□ 0.36
HMGA1-205ENST00000447654 C6P13671 934 aa17.3■□□□□ 0.36
HMGA1-205ENST00000447654 DAOP14920 347 aa17.3■□□□□ 0.36
HMGA1-205ENST00000447654 HIST1H2BOP23527 126 aa17.3■□□□□ 0.36
HMGA1-205ENST00000447654 HIST1H2BBP33778 126 aa17.3■□□□□ 0.36
HMGA1-205ENST00000447654 NCBP2P52298 156 aaKnown RBP eCLIP17.3■□□□□ 0.36
HMGA1-205ENST00000447654 HIST1H2BDP58876 126 aa17.3■□□□□ 0.36
HMGA1-205ENST00000447654 HIST1H2BCP62807 126 aa17.3■□□□□ 0.36
HMGA1-205ENST00000447654 GPM6BQ13491 265 aa17.3■□□□□ 0.36
HMGA1-205ENST00000447654 SSPNQ14714 243 aa17.3■□□□□ 0.36
HMGA1-205ENST00000447654 GUK1Q16774 197 aa17.3■□□□□ 0.36
HMGA1-205ENST00000447654 HIST2H2BEQ16778 126 aa17.3■□□□□ 0.36
HMGA1-205ENST00000447654 C14orf28Q4W4Y0 310 aa17.3■□□□□ 0.36
HMGA1-205ENST00000447654 HIST2H2BFQ5QNW6 126 aaPredicted RBP17.3■□□□□ 0.36
HMGA1-205ENST00000447654 Q6ZRG5 221 aa17.3■□□□□ 0.36
HMGA1-205ENST00000447654 UBE3DQ7Z6J8 389 aa17.3■□□□□ 0.36
HMGA1-205ENST00000447654 TRAPPC5Q8IUR0 188 aa17.3■□□□□ 0.36
HMGA1-205ENST00000447654 CYB561A3Q8NBI2 242 aa17.3■□□□□ 0.36
HMGA1-205ENST00000447654 HPSE2Q8WWQ2 592 aa17.3■□□□□ 0.36
HMGA1-205ENST00000447654 HIST1H2BHQ93079 126 aa17.3■□□□□ 0.36
HMGA1-205ENST00000447654 GAL3ST3Q96A11 431 aa17.3■□□□□ 0.36
HMGA1-205ENST00000447654 ZMYND19Q96E35 227 aaPredicted RBP17.3■□□□□ 0.36
HMGA1-205ENST00000447654 HIST1H2BNQ99877 126 aa17.3■□□□□ 0.36
HMGA1-205ENST00000447654 HIST1H2BMQ99879 126 aa17.3■□□□□ 0.36
HMGA1-205ENST00000447654 SCRT1Q9BWW7 348 aa17.3■□□□□ 0.36
HMGA1-205ENST00000447654 SUCNR1Q9BXA5 334 aa17.3■□□□□ 0.36
HMGA1-205ENST00000447654 CST11Q9H112 138 aa17.3■□□□□ 0.36
HMGA1-205ENST00000447654 C5AR2Q9P296 337 aa17.3■□□□□ 0.36
HMGA1-205ENST00000447654 PRODH2Q9UF12 536 aa17.3■□□□□ 0.36
HMGA1-205ENST00000447654 SMCO3A2RU48 225 aa17.29■□□□□ 0.36
HMGA1-205ENST00000447654 AGPAT2O15120 278 aa17.29■□□□□ 0.36
HMGA1-205ENST00000447654 SFTPBP07988 381 aa17.29■□□□□ 0.36
HMGA1-205ENST00000447654 OR8U9P0C7N5 309 aa17.29■□□□□ 0.36
HMGA1-205ENST00000447654 SNRPNP63162 240 aaKnown RBP17.29■□□□□ 0.36
HMGA1-205ENST00000447654 TMEM268Q5VZI3 342 aa17.29■□□□□ 0.36
HMGA1-205ENST00000447654 CYB5R2Q6BCY4 276 aa17.29■□□□□ 0.36
HMGA1-205ENST00000447654 ZNF529Q6P280 563 aa17.29■□□□□ 0.36
HMGA1-205ENST00000447654 MRPL52Q86TS9 123 aaKnown RBP17.29■□□□□ 0.36
HMGA1-205ENST00000447654 GKN2Q86XP6 184 aa17.29■□□□□ 0.36
HMGA1-205ENST00000447654 NRSN1Q8IZ57 195 aa17.29■□□□□ 0.36
HMGA1-205ENST00000447654 GPR137CQ8N3F9 429 aa17.29■□□□□ 0.36
HMGA1-205ENST00000447654 OR9A1PQ8NGU1 263 aa17.29■□□□□ 0.36
HMGA1-205ENST00000447654 OR8U1Q8NH10 309 aa17.29■□□□□ 0.36
HMGA1-205ENST00000447654 ST7LQ8TDW4 575 aa17.29■□□□□ 0.36
HMGA1-205ENST00000447654 CCDC74AQ96AQ1 378 aa17.29■□□□□ 0.36
HMGA1-205ENST00000447654 BPIFA2Q96DR5 249 aa17.29■□□□□ 0.36
HMGA1-205ENST00000447654 RAB33BQ9H082 229 aa17.29■□□□□ 0.36
HMGA1-205ENST00000447654 SLC35B3Q9H1N7 401 aa17.29■□□□□ 0.36
HMGA1-205ENST00000447654 SRMSQ9H3Y6 488 aa17.29■□□□□ 0.36
HMGA1-205ENST00000447654 DEC1Q9P2X7 70 aa17.29■□□□□ 0.36
HMGA1-205ENST00000447654 GOLT1BQ9Y3E0 138 aa17.29■□□□□ 0.36
HMGA1-205ENST00000447654 ATG2BQ96BY7 2078 aa17.29■□□□□ 0.36
HMGA1-205ENST00000447654 CSTBP04080 98 aaKnown RBP17.29■□□□□ 0.36
HMGA1-205ENST00000447654 PRNPP04156 253 aa17.29■□□□□ 0.36
HMGA1-205ENST00000447654 SERPINA5P05154 406 aa17.29■□□□□ 0.36
HMGA1-205ENST00000447654 F13BP05160 661 aa17.29■□□□□ 0.36
HMGA1-205ENST00000447654 METTL15P1P0C7V9 234 aa17.29■□□□□ 0.36
HMGA1-205ENST00000447654 IL2RGP31785 369 aa17.29■□□□□ 0.36
HMGA1-205ENST00000447654 SERPINF1P36955 418 aa17.29■□□□□ 0.36
HMGA1-205ENST00000447654 FAM3AP98173 230 aa17.29■□□□□ 0.36
HMGA1-205ENST00000447654 MEF2AQ02078 507 aaPredicted RBP17.29■□□□□ 0.36
HMGA1-205ENST00000447654 PLA2G7Q13093 441 aa17.29■□□□□ 0.36
HMGA1-205ENST00000447654 ZNF684Q5T5D7 378 aa17.29■□□□□ 0.36
HMGA1-205ENST00000447654 PHF19Q5T6S3 580 aa17.29■□□□□ 0.36
HMGA1-205ENST00000447654 CACUL1Q86Y37 369 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms