RNA–Protein interactions for RNA: ENST00000446987.5

DDX56-206, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-206ENST00000446987 TMEM8BA6NDV4 472 aa11.78□□□□□ -0.52
DDX56-206ENST00000446987 TMEM150CB9EJG8 249 aa11.78□□□□□ -0.52
DDX56-206ENST00000446987 H7BY64 318 aa11.78□□□□□ -0.52
DDX56-206ENST00000446987 H7C417 338 aa11.78□□□□□ -0.52
DDX56-206ENST00000446987 OGG1O15527 345 aa11.78□□□□□ -0.52
DDX56-206ENST00000446987 FBXO24O75426 580 aa11.78□□□□□ -0.52
DDX56-206ENST00000446987 FAM157CP0CG43 387 aa11.78□□□□□ -0.52
DDX56-206ENST00000446987 CMPK1P30085 196 aa11.78□□□□□ -0.52
DDX56-206ENST00000446987 DCTDP32321 178 aa11.78□□□□□ -0.52
DDX56-206ENST00000446987 RAB1AP62820 205 aa11.78□□□□□ -0.52
DDX56-206ENST00000446987 RAP1AP62834 184 aa11.78□□□□□ -0.52
DDX56-206ENST00000446987 IRF8Q02556 426 aa11.78□□□□□ -0.52
DDX56-206ENST00000446987 SRSF6Q13247 344 aaKnown RBP11.78□□□□□ -0.52
DDX56-206ENST00000446987 TGIF1Q15583 401 aa11.78□□□□□ -0.52
DDX56-206ENST00000446987 DCAF12Q5T6F0 453 aa11.78□□□□□ -0.52
DDX56-206ENST00000446987 UNQ9370/PRO34162Q6UXP9 181 aa11.78□□□□□ -0.52
DDX56-206ENST00000446987 ESPNLQ6ZVH7 1005 aa11.78□□□□□ -0.52
DDX56-206ENST00000446987 HIST2H3AQ71DI3 136 aa11.78□□□□□ -0.52
DDX56-206ENST00000446987 GLB1L2Q8IW92 636 aa11.78□□□□□ -0.52
DDX56-206ENST00000446987 OR4D11Q8NGI4 311 aa11.78□□□□□ -0.52
DDX56-206ENST00000446987 PAQR8Q8TEZ7 354 aa11.78□□□□□ -0.52
DDX56-206ENST00000446987 SLC25A36Q96CQ1 311 aa11.78□□□□□ -0.52
DDX56-206ENST00000446987 CALML5Q9NZT1 146 aa11.78□□□□□ -0.52
DDX56-206ENST00000446987 LPAR3Q9UBY5 353 aa11.78□□□□□ -0.52
DDX56-206ENST00000446987 MTFP1Q9UDX5 166 aa11.78□□□□□ -0.52
DDX56-206ENST00000446987 SSUH2Q9Y2M2 353 aa11.78□□□□□ -0.52
DDX56-206ENST00000446987 URB1O60287 2271 aaKnown RBP11.78□□□□□ -0.52
DDX56-206ENST00000446987 TEX13DA0A0J9YY54 714 aaPredicted RBP11.77□□□□□ -0.53
DDX56-206ENST00000446987 STK17BO94768 372 aa11.77□□□□□ -0.53
DDX56-206ENST00000446987 ARL4DP49703 201 aa11.77□□□□□ -0.53
DDX56-206ENST00000446987 CSNK1G2P78368 415 aa11.77□□□□□ -0.53
DDX56-206ENST00000446987 CLN3Q13286 438 aa11.77□□□□□ -0.53
DDX56-206ENST00000446987 SKP2Q13309 424 aa11.77□□□□□ -0.53
DDX56-206ENST00000446987 PIN1Q13526 163 aaPredicted RBP11.77□□□□□ -0.53
DDX56-206ENST00000446987 RHEBQ15382 184 aa11.77□□□□□ -0.53
DDX56-206ENST00000446987 FBXO42Q6P3S6 717 aa11.77□□□□□ -0.53
DDX56-206ENST00000446987 MEPCEQ7L2J0 689 aaKnown RBP11.77□□□□□ -0.53
DDX56-206ENST00000446987 SSX6Q7RTT6 188 aa11.77□□□□□ -0.53
DDX56-206ENST00000446987 THOC6Q86W42 341 aaKnown RBP11.77□□□□□ -0.53
DDX56-206ENST00000446987 PPP1R3BQ86XI6 285 aa11.77□□□□□ -0.53
DDX56-206ENST00000446987 ARHGEF39Q8N4T4 335 aa11.77□□□□□ -0.53
DDX56-206ENST00000446987 SLC2A12Q8TD20 617 aa11.77□□□□□ -0.53
DDX56-206ENST00000446987 NEIL2Q969S2 332 aa11.77□□□□□ -0.53
DDX56-206ENST00000446987 TMEM19Q96HH6 336 aa11.77□□□□□ -0.53
DDX56-206ENST00000446987 LAT2Q9GZY6 243 aa11.77□□□□□ -0.53
DDX56-206ENST00000446987 AKIRIN1Q9H9L7 192 aaPredicted RBP11.77□□□□□ -0.53
DDX56-206ENST00000446987 VSX1Q9NZR4 365 aaPredicted RBP11.77□□□□□ -0.53
DDX56-206ENST00000446987 GDF2Q9UK05 429 aaPredicted RBP11.77□□□□□ -0.53
DDX56-206ENST00000446987 RARRES3Q9UL19 164 aa11.77□□□□□ -0.53
DDX56-206ENST00000446987 SLC22A14Q9Y267 594 aa11.77□□□□□ -0.53
DDX56-206ENST00000446987 WIF1Q9Y5W5 379 aa11.77□□□□□ -0.53
DDX56-206ENST00000446987 SEC16AO15027 2179 aa11.77□□□□□ -0.53
DDX56-206ENST00000446987 DSPP15924 2871 aaKnown RBP11.77□□□□□ -0.53
DDX56-206ENST00000446987 ZNF705EA8MWA4 302 aaPredicted RBP11.76□□□□□ -0.53
DDX56-206ENST00000446987 FAM157AC9JC47 383 aa11.76□□□□□ -0.53
DDX56-206ENST00000446987 FARS2O95363 451 aaKnown RBP11.76□□□□□ -0.53
DDX56-206ENST00000446987 ITGB2P05107 769 aa11.76□□□□□ -0.53
DDX56-206ENST00000446987 SERPINA5P05154 406 aa11.76□□□□□ -0.53
DDX56-206ENST00000446987 LINC00614P0C842 121 aa11.76□□□□□ -0.53
DDX56-206ENST00000446987 AHRP35869 848 aa11.76□□□□□ -0.53
DDX56-206ENST00000446987 PCBP4P57723 403 aaKnown RBP11.76□□□□□ -0.53
DDX56-206ENST00000446987 GAGE1Q13065 139 aa11.76□□□□□ -0.53
DDX56-206ENST00000446987 COTL1Q14019 142 aa11.76□□□□□ -0.53
DDX56-206ENST00000446987 DOC2AQ14183 400 aa11.76□□□□□ -0.53
DDX56-206ENST00000446987 TMEM69Q5SWH9 247 aa11.76□□□□□ -0.53
DDX56-206ENST00000446987 THEM4Q5T1C6 240 aa11.76□□□□□ -0.53
DDX56-206ENST00000446987 HIST2H3PS2Q5TEC6 136 aa11.76□□□□□ -0.53
DDX56-206ENST00000446987 ZNF385CQ66K41 422 aaPredicted RBP11.76□□□□□ -0.53
DDX56-206ENST00000446987 AWAT2Q6E213 333 aa11.76□□□□□ -0.53
DDX56-206ENST00000446987 MTFR2Q6P444 385 aa11.76□□□□□ -0.53
DDX56-206ENST00000446987 IZUMO1Q8IYV9 350 aa11.76□□□□□ -0.53
DDX56-206ENST00000446987 BOLLQ8N9W6 283 aaKnown RBP11.76□□□□□ -0.53
DDX56-206ENST00000446987 INO80EQ8NBZ0 244 aaPredicted RBP11.76□□□□□ -0.53
DDX56-206ENST00000446987 FBXO17Q96EF6 278 aa11.76□□□□□ -0.53
DDX56-206ENST00000446987 LRFN5Q96NI6 719 aa11.76□□□□□ -0.53
DDX56-206ENST00000446987 PRAP1Q96NZ9 151 aa11.76□□□□□ -0.53
DDX56-206ENST00000446987 OR2A5Q96R48 311 aa11.76□□□□□ -0.53
DDX56-206ENST00000446987 SLC25A21Q9BQT8 299 aaPredicted RBP11.76□□□□□ -0.53
DDX56-206ENST00000446987 ZPBPQ9BS86 351 aa11.76□□□□□ -0.53
DDX56-206ENST00000446987 SYT4Q9H2B2 425 aa11.76□□□□□ -0.53
DDX56-206ENST00000446987 LAMP5Q9UJQ1 280 aa11.76□□□□□ -0.53
DDX56-206ENST00000446987 ZMIZ1Q9ULJ6 1067 aa11.76□□□□□ -0.53
DDX56-206ENST00000446987 PKD1L2Q7Z442 2459 aa11.76□□□□□ -0.53
DDX56-206ENST00000446987 PTPRQQ9UMZ3 2332 aa11.76□□□□□ -0.53
DDX56-206ENST00000446987 TRBV6-7A0A0A0MS04 114 aa11.76□□□□□ -0.53
DDX56-206ENST00000446987 GXYLT2A0PJZ3 443 aa11.76□□□□□ -0.53
DDX56-206ENST00000446987 CDHR4A6H8M9 788 aa11.76□□□□□ -0.53
DDX56-206ENST00000446987 IFITM10A6NMD0 228 aa11.76□□□□□ -0.53
DDX56-206ENST00000446987 IFITM5A6NNB3 132 aa11.76□□□□□ -0.53
DDX56-206ENST00000446987 P2RX6O15547 441 aa11.76□□□□□ -0.53
DDX56-206ENST00000446987 TBX19O60806 448 aa11.76□□□□□ -0.53
DDX56-206ENST00000446987 CTNSO60931 367 aa11.76□□□□□ -0.53
DDX56-206ENST00000446987 GBAP04062 536 aa11.76□□□□□ -0.53
DDX56-206ENST00000446987 RLN1P04808 185 aa11.76□□□□□ -0.53
DDX56-206ENST00000446987 BCHEP06276 602 aa11.76□□□□□ -0.53
DDX56-206ENST00000446987 SLC6A9P48067 706 aa11.76□□□□□ -0.53
DDX56-206ENST00000446987 DVL1P1P54792 670 aaPredicted RBP11.76□□□□□ -0.53
DDX56-206ENST00000446987 ACTC1P68032 377 aa11.76□□□□□ -0.53
DDX56-206ENST00000446987 ACTA1P68133 377 aa11.76□□□□□ -0.53
DDX56-206ENST00000446987 RBM39Q14498 530 aaKnown RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms