RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 IGFBP3P17936 291 aaPredicted RBP15.46■□□□□ 0.07
SMC6-206ENST00000446852 PTH2RP49190 550 aa15.46■□□□□ 0.07
SMC6-206ENST00000446852 HACD4Q5VWC8 232 aa15.46■□□□□ 0.07
SMC6-206ENST00000446852 PLPP7Q8NBV4 271 aa15.46■□□□□ 0.07
SMC6-206ENST00000446852 OR13C3Q8NGS6 347 aa15.46■□□□□ 0.07
SMC6-206ENST00000446852 OR6F1Q8NGZ6 308 aa15.46■□□□□ 0.07
SMC6-206ENST00000446852 NAA11Q9BSU3 229 aaPredicted RBP15.46■□□□□ 0.07
SMC6-206ENST00000446852 DDX28Q9NUL7 540 aaKnown RBP15.46■□□□□ 0.07
SMC6-206ENST00000446852 NPIPA2E9PIF3 369 aa15.46■□□□□ 0.07
SMC6-206ENST00000446852 NPIPA3F8WFD2 350 aa15.46■□□□□ 0.07
SMC6-206ENST00000446852 SMAD9O15198 467 aaKnown RBP15.46■□□□□ 0.07
SMC6-206ENST00000446852 TTRP02766 147 aa15.46■□□□□ 0.07
SMC6-206ENST00000446852 FSTP19883 344 aa15.46■□□□□ 0.07
SMC6-206ENST00000446852 ART1P52961 327 aa15.46■□□□□ 0.07
SMC6-206ENST00000446852 TRIP6Q15654 476 aaKnown RBP15.46■□□□□ 0.07
SMC6-206ENST00000446852 KCNMB1Q16558 191 aa15.46■□□□□ 0.07
SMC6-206ENST00000446852 ZNF704Q6ZNC4 412 aaPredicted RBP15.46■□□□□ 0.07
SMC6-206ENST00000446852 LINGO2Q7L985 606 aa15.46■□□□□ 0.07
SMC6-206ENST00000446852 TMEM123Q8N131 208 aa15.46■□□□□ 0.07
SMC6-206ENST00000446852 ZIC4Q8N9L1 334 aa15.46■□□□□ 0.07
SMC6-206ENST00000446852 HAVCR1Q96D42 359 aa15.46■□□□□ 0.07
SMC6-206ENST00000446852 MARVELD1Q9BSK0 173 aa15.46■□□□□ 0.07
SMC6-206ENST00000446852 PARD6AQ9NPB6 346 aa15.46■□□□□ 0.07
SMC6-206ENST00000446852 LRFN1Q9P244 771 aa15.46■□□□□ 0.07
SMC6-206ENST00000446852 GJE1A6NN92 205 aa15.45■□□□□ 0.06
SMC6-206ENST00000446852 TLX3O43711 291 aaPredicted RBP15.45■□□□□ 0.06
SMC6-206ENST00000446852 WDPCPO95876 746 aa15.45■□□□□ 0.06
SMC6-206ENST00000446852 ACSM4P0C7M7 580 aa15.45■□□□□ 0.06
SMC6-206ENST00000446852 UBCP0CG48 685 aaKnown RBP15.45■□□□□ 0.06
SMC6-206ENST00000446852 CDK2P24941 298 aa15.45■□□□□ 0.06
SMC6-206ENST00000446852 DCTDP32321 178 aa15.45■□□□□ 0.06
SMC6-206ENST00000446852 CD96P40200 585 aa15.45■□□□□ 0.06
SMC6-206ENST00000446852 CSNK1A1P48729 337 aa15.45■□□□□ 0.06
SMC6-206ENST00000446852 FOXO1Q12778 655 aa15.45■□□□□ 0.06
SMC6-206ENST00000446852 TATDN3Q17R31 274 aa15.45■□□□□ 0.06
SMC6-206ENST00000446852 PLA1AQ53H76 456 aa15.45■□□□□ 0.06
SMC6-206ENST00000446852 WIPI1Q5MNZ9 446 aaPredicted RBP15.45■□□□□ 0.06
SMC6-206ENST00000446852 DCAF10Q5QP82 559 aa15.45■□□□□ 0.06
SMC6-206ENST00000446852 SIAH3Q8IW03 269 aa15.45■□□□□ 0.06
SMC6-206ENST00000446852 TOMM5Q8N4H5 51 aa15.45■□□□□ 0.06
SMC6-206ENST00000446852 OR51D1Q8NGF3 324 aa15.45■□□□□ 0.06
SMC6-206ENST00000446852 OR51A2Q8NGJ7 313 aa15.45■□□□□ 0.06
SMC6-206ENST00000446852 OR2AJ1Q8NGZ0 328 aa15.45■□□□□ 0.06
SMC6-206ENST00000446852 RAB40AQ8WXH6 277 aa15.45■□□□□ 0.06
SMC6-206ENST00000446852 TMEM54Q969K7 222 aa15.45■□□□□ 0.06
SMC6-206ENST00000446852 S100A16Q96FQ6 103 aaKnown RBP15.45■□□□□ 0.06
SMC6-206ENST00000446852 KCNK15Q9H427 330 aa15.45■□□□□ 0.06
SMC6-206ENST00000446852 ZNF878C9JN71 531 aa15.45■□□□□ 0.06
SMC6-206ENST00000446852 RER1O15258 196 aa15.45■□□□□ 0.06
SMC6-206ENST00000446852 NEURL1O76050 574 aa15.45■□□□□ 0.06
SMC6-206ENST00000446852 FAM166AQ6J272 317 aa15.45■□□□□ 0.06
SMC6-206ENST00000446852 OR6N1Q8NGY5 312 aa15.45■□□□□ 0.06
SMC6-206ENST00000446852 SIGLEC12Q96PQ1 595 aa15.45■□□□□ 0.06
SMC6-206ENST00000446852 PNRC2Q9NPJ4 139 aaKnown RBP15.45■□□□□ 0.06
SMC6-206ENST00000446852 TTLL8A6PVC2 850 aa15.44■□□□□ 0.06
SMC6-206ENST00000446852 SLC17A2O00624 439 aa15.44■□□□□ 0.06
SMC6-206ENST00000446852 TRAPPC6AO75865 159 aa15.44■□□□□ 0.06
SMC6-206ENST00000446852 SELENOPP49908 381 aa15.44■□□□□ 0.06
SMC6-206ENST00000446852 RAC3P60763 192 aa15.44■□□□□ 0.06
SMC6-206ENST00000446852 GABREP78334 506 aa15.44■□□□□ 0.06
SMC6-206ENST00000446852 TMEM69Q5SWH9 247 aa15.44■□□□□ 0.06
SMC6-206ENST00000446852 TMEM244Q5VVB8 128 aa15.44■□□□□ 0.06
SMC6-206ENST00000446852 JMJD6Q6NYC1 403 aaPredicted RBP15.44■□□□□ 0.06
SMC6-206ENST00000446852 KLHL24Q6TFL4 600 aa15.44■□□□□ 0.06
SMC6-206ENST00000446852 KCNE4Q8WWG9 221 aa15.44■□□□□ 0.06
SMC6-206ENST00000446852 SFXN2Q96NB2 322 aa15.44■□□□□ 0.06
SMC6-206ENST00000446852 PBOV1Q9GZY1 135 aa15.44■□□□□ 0.06
SMC6-206ENST00000446852 ZFP64Q9NPA5 681 aa15.44■□□□□ 0.06
SMC6-206ENST00000446852 CKLFQ9UBR5 152 aa15.44■□□□□ 0.06
SMC6-206ENST00000446852 STMND1H3BQB6 276 aa15.44■□□□□ 0.06
SMC6-206ENST00000446852 PTHLHP12272 177 aa15.44■□□□□ 0.06
SMC6-206ENST00000446852 CNR1P21554 472 aa15.44■□□□□ 0.06
SMC6-206ENST00000446852 ANOS1P23352 680 aa15.44■□□□□ 0.06
SMC6-206ENST00000446852 GDF1P27539 372 aa15.44■□□□□ 0.06
SMC6-206ENST00000446852 STARP49675 285 aa15.44■□□□□ 0.06
SMC6-206ENST00000446852 EFNB2P52799 333 aa15.44■□□□□ 0.06
SMC6-206ENST00000446852 SUCLG1P53597 346 aaKnown RBP15.44■□□□□ 0.06
SMC6-206ENST00000446852 SCAND1P57086 179 aa15.44■□□□□ 0.06
SMC6-206ENST00000446852 C10orf128Q5T292 105 aa15.44■□□□□ 0.06
SMC6-206ENST00000446852 PIP4P1Q86T03 277 aa15.44■□□□□ 0.06
SMC6-206ENST00000446852 ELMOD2Q8IZ81 293 aa15.44■□□□□ 0.06
SMC6-206ENST00000446852 UBASH3BQ8TF42 649 aa15.44■□□□□ 0.06
SMC6-206ENST00000446852 ZNF416Q9BWM5 594 aa15.44■□□□□ 0.06
SMC6-206ENST00000446852 ALG5Q9Y673 324 aa15.44■□□□□ 0.06
SMC6-206ENST00000446852 HMX3A6NHT5 357 aa15.43■□□□□ 0.06
SMC6-206ENST00000446852 A8MV72 311 aaPredicted RBP15.43■□□□□ 0.06
SMC6-206ENST00000446852 ORC5O43913 435 aa15.43■□□□□ 0.06
SMC6-206ENST00000446852 GDNFP39905 211 aa15.43■□□□□ 0.06
SMC6-206ENST00000446852 POU3F4P49335 361 aa15.43■□□□□ 0.06
SMC6-206ENST00000446852 ZNF133P52736 654 aaPredicted RBP15.43■□□□□ 0.06
SMC6-206ENST00000446852 PSMA6P60900 246 aaKnown RBP15.43■□□□□ 0.06
SMC6-206ENST00000446852 KLF9Q13886 244 aaPredicted RBP15.43■□□□□ 0.06
SMC6-206ENST00000446852 ABHD17BQ5VST6 288 aa15.43■□□□□ 0.06
SMC6-206ENST00000446852 BIVMQ86UB2 503 aa15.43■□□□□ 0.06
SMC6-206ENST00000446852 OR52I2Q8NH67 350 aa15.43■□□□□ 0.06
SMC6-206ENST00000446852 ST6GAL2Q96JF0 529 aa15.43■□□□□ 0.06
SMC6-206ENST00000446852 HES7Q9BYE0 225 aa15.43■□□□□ 0.06
SMC6-206ENST00000446852 OR2B2Q9GZK3 357 aa15.43■□□□□ 0.06
SMC6-206ENST00000446852 RABL2AQ9UBK7 228 aaPredicted RBP15.43■□□□□ 0.06
SMC6-206ENST00000446852 FOXD3Q9UJU5 478 aaPredicted RBP15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms