RNA–Protein interactions for RNA: ENST00000446690.2

COL6A4P1-201, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 2 BASIC

Gene COL6A4P1, Length 2,336 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-201ENST00000446690 MED12Q93074 2177 aa8.45□□□□□ -1.06
COL6A4P1-201ENST00000446690 EML6Q6ZMW3 1958 aa8.45□□□□□ -1.06
COL6A4P1-201ENST00000446690 LOC102725191A0A1B0GVB3 256 aa8.45□□□□□ -1.06
COL6A4P1-201ENST00000446690 RER1O15258 196 aa8.45□□□□□ -1.06
COL6A4P1-201ENST00000446690 LMX1BO60663 402 aa8.45□□□□□ -1.06
COL6A4P1-201ENST00000446690 SRSF10O75494 262 aaKnown RBP8.45□□□□□ -1.06
COL6A4P1-201ENST00000446690 ALX3O95076 343 aa8.45□□□□□ -1.06
COL6A4P1-201ENST00000446690 CD2P06729 351 aa8.45□□□□□ -1.06
COL6A4P1-201ENST00000446690 CNR1P21554 472 aa8.45□□□□□ -1.06
COL6A4P1-201ENST00000446690 CSNK1A1P48729 337 aa8.45□□□□□ -1.06
COL6A4P1-201ENST00000446690 PRKXP51817 358 aa8.45□□□□□ -1.06
COL6A4P1-201ENST00000446690 ART1P52961 327 aa8.45□□□□□ -1.06
COL6A4P1-201ENST00000446690 RAB25P57735 213 aa8.45□□□□□ -1.06
COL6A4P1-201ENST00000446690 GABREP78334 506 aa8.45□□□□□ -1.06
COL6A4P1-201ENST00000446690 GPR176Q14439 515 aa8.45□□□□□ -1.06
COL6A4P1-201ENST00000446690 DCAF10Q5QP82 559 aa8.45□□□□□ -1.06
COL6A4P1-201ENST00000446690 SIGIRRQ6IA17 410 aa8.45□□□□□ -1.06
COL6A4P1-201ENST00000446690 TOMM5Q8N4H5 51 aa8.45□□□□□ -1.06
COL6A4P1-201ENST00000446690 OR9K2Q8NGE7 335 aa8.45□□□□□ -1.06
COL6A4P1-201ENST00000446690 NTNG2Q96CW9 530 aa8.45□□□□□ -1.06
COL6A4P1-201ENST00000446690 SIGLEC12Q96PQ1 595 aa8.45□□□□□ -1.06
COL6A4P1-201ENST00000446690 RBM24Q9BX46 236 aaKnown RBP8.45□□□□□ -1.06
COL6A4P1-201ENST00000446690 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.45□□□□□ -1.06
COL6A4P1-201ENST00000446690 PARD6AQ9NPB6 346 aa8.45□□□□□ -1.06
COL6A4P1-201ENST00000446690 TAS2R4Q9NYW5 299 aa8.45□□□□□ -1.06
COL6A4P1-201ENST00000446690 GLTPQ9NZD2 209 aa8.45□□□□□ -1.06
COL6A4P1-201ENST00000446690 ZNF221Q9UK13 617 aa8.45□□□□□ -1.06
COL6A4P1-201ENST00000446690 HHLA2Q9UM44 414 aa8.45□□□□□ -1.06
COL6A4P1-201ENST00000446690 LHFPL6Q9Y693 200 aa8.45□□□□□ -1.06
COL6A4P1-201ENST00000446690 SPAARA0A1B0GVQ0 90 aa8.45□□□□□ -1.06
COL6A4P1-201ENST00000446690 LOC107986453A0A1B0GWG9 222 aa8.45□□□□□ -1.06
COL6A4P1-201ENST00000446690 LRRC3CA6NJW4 275 aa8.45□□□□□ -1.06
COL6A4P1-201ENST00000446690 CALCBP10092 127 aa8.45□□□□□ -1.06
COL6A4P1-201ENST00000446690 SLC2A1P11166 492 aa8.45□□□□□ -1.06
COL6A4P1-201ENST00000446690 CASRP41180 1078 aa8.45□□□□□ -1.06
COL6A4P1-201ENST00000446690 SELENOPP49908 381 aa8.45□□□□□ -1.06
COL6A4P1-201ENST00000446690 B3GALT5-AS1P59052 145 aa8.45□□□□□ -1.06
COL6A4P1-201ENST00000446690 GALK2Q01415 458 aa8.45□□□□□ -1.06
COL6A4P1-201ENST00000446690 PLA2G7Q13093 441 aa8.45□□□□□ -1.06
COL6A4P1-201ENST00000446690 ZNF239Q16600 458 aaKnown RBP8.45□□□□□ -1.06
COL6A4P1-201ENST00000446690 PHYHD1Q5SRE7 291 aa8.45□□□□□ -1.06
COL6A4P1-201ENST00000446690 TMEM69Q5SWH9 247 aa8.45□□□□□ -1.06
COL6A4P1-201ENST00000446690 ATAD3CQ5T2N8 411 aa8.45□□□□□ -1.06
COL6A4P1-201ENST00000446690 DEGS2Q6QHC5 323 aa8.45□□□□□ -1.06
COL6A4P1-201ENST00000446690 RFPL4BQ6ZWI9 263 aa8.45□□□□□ -1.06
COL6A4P1-201ENST00000446690 LRRC18Q8N456 261 aa8.45□□□□□ -1.06
COL6A4P1-201ENST00000446690 OR51D1Q8NGF3 324 aa8.45□□□□□ -1.06
COL6A4P1-201ENST00000446690 OR10S1Q8NGN2 331 aa8.45□□□□□ -1.06
COL6A4P1-201ENST00000446690 OR6F1Q8NGZ6 308 aa8.45□□□□□ -1.06
COL6A4P1-201ENST00000446690 ROBO4Q8WZ75 1007 aa8.45□□□□□ -1.06
COL6A4P1-201ENST00000446690 TRIM63Q969Q1 353 aa8.45□□□□□ -1.06
COL6A4P1-201ENST00000446690 SLC25A38Q96DW6 304 aa8.45□□□□□ -1.06
COL6A4P1-201ENST00000446690 MED30Q96HR3 178 aa8.45□□□□□ -1.06
COL6A4P1-201ENST00000446690 UTP23Q9BRU9 249 aaKnown RBP8.45□□□□□ -1.06
COL6A4P1-201ENST00000446690 HES7Q9BYE0 225 aa8.45□□□□□ -1.06
COL6A4P1-201ENST00000446690 ZFP64Q9NPA5 681 aa8.45□□□□□ -1.06
COL6A4P1-201ENST00000446690 MRPL15Q9P015 296 aaKnown RBP8.45□□□□□ -1.06
COL6A4P1-201ENST00000446690 STEAP1Q9UHE8 339 aa8.45□□□□□ -1.06
COL6A4P1-201ENST00000446690 SDK2Q58EX2 2172 aa8.44□□□□□ -1.06
COL6A4P1-201ENST00000446690 CACNA1CQ13936 2221 aa8.44□□□□□ -1.06
COL6A4P1-201ENST00000446690 PCSK5Q92824 1860 aa8.44□□□□□ -1.06
COL6A4P1-201ENST00000446690 CELSR3Q9NYQ7 3312 aa8.44□□□□□ -1.06
COL6A4P1-201ENST00000446690 DCDC2BA2VCK2 349 aa8.44□□□□□ -1.06
COL6A4P1-201ENST00000446690 A8MV72 311 aaPredicted RBP8.44□□□□□ -1.06
COL6A4P1-201ENST00000446690 CXCL13O43927 109 aa8.44□□□□□ -1.06
COL6A4P1-201ENST00000446690 VAMP5O95183 116 aa8.44□□□□□ -1.06
COL6A4P1-201ENST00000446690 TMIGD3P0DMS9 266 aaPredicted RBP8.44□□□□□ -1.06
COL6A4P1-201ENST00000446690 PTHLHP12272 177 aa8.44□□□□□ -1.06
COL6A4P1-201ENST00000446690 POU3F2P20265 443 aaPredicted RBP8.44□□□□□ -1.06
COL6A4P1-201ENST00000446690 MMP15P51511 669 aa8.44□□□□□ -1.06
COL6A4P1-201ENST00000446690 SUCLG1P53597 346 aaKnown RBP8.44□□□□□ -1.06
COL6A4P1-201ENST00000446690 SPOCK1Q08629 439 aa8.44□□□□□ -1.06
COL6A4P1-201ENST00000446690 TGIF1Q15583 401 aa8.44□□□□□ -1.06
COL6A4P1-201ENST00000446690 HIST3H3Q16695 136 aa8.44□□□□□ -1.06
COL6A4P1-201ENST00000446690 ATP1A1-AS1Q5TC04 95 aa8.44□□□□□ -1.06
COL6A4P1-201ENST00000446690 ZNF704Q6ZNC4 412 aaPredicted RBP8.44□□□□□ -1.06
COL6A4P1-201ENST00000446690 COMMD2Q86X83 199 aa8.44□□□□□ -1.06
COL6A4P1-201ENST00000446690 KCNE4Q8WWG9 221 aa8.44□□□□□ -1.06
COL6A4P1-201ENST00000446690 THRSPQ92748 146 aa8.44□□□□□ -1.06
COL6A4P1-201ENST00000446690 YIPF5Q969M3 257 aa8.44□□□□□ -1.06
COL6A4P1-201ENST00000446690 OR2M2Q96R28 347 aa8.44□□□□□ -1.06
COL6A4P1-201ENST00000446690 PBOV1Q9GZY1 135 aa8.44□□□□□ -1.06
COL6A4P1-201ENST00000446690 AUNIPQ9H7T9 357 aa8.44□□□□□ -1.06
COL6A4P1-201ENST00000446690 FAM206AQ9NX38 181 aa8.44□□□□□ -1.06
COL6A4P1-201ENST00000446690 ABI3Q9P2A4 366 aa8.44□□□□□ -1.06
COL6A4P1-201ENST00000446690 CDV3Q9UKY7 258 aaKnown RBP8.44□□□□□ -1.06
COL6A4P1-201ENST00000446690 CACNG2Q9Y698 323 aa8.44□□□□□ -1.06
COL6A4P1-201ENST00000446690 ZNF878C9JN71 531 aa8.43□□□□□ -1.06
COL6A4P1-201ENST00000446690 TERTO14746 1132 aaKnown RBP8.43□□□□□ -1.06
COL6A4P1-201ENST00000446690 SMAD9O15198 467 aaKnown RBP8.43□□□□□ -1.06
COL6A4P1-201ENST00000446690 ITGA5P08648 1049 aa8.43□□□□□ -1.06
COL6A4P1-201ENST00000446690 CDK2P24941 298 aa8.43□□□□□ -1.06
COL6A4P1-201ENST00000446690 GNALP38405 381 aa8.43□□□□□ -1.06
COL6A4P1-201ENST00000446690 MMP16P51512 607 aa8.43□□□□□ -1.06
COL6A4P1-201ENST00000446690 RAC3P60763 192 aa8.43□□□□□ -1.06
COL6A4P1-201ENST00000446690 SRYQ05066 204 aa8.43□□□□□ -1.06
COL6A4P1-201ENST00000446690 CDK10Q15131 360 aa8.43□□□□□ -1.06
COL6A4P1-201ENST00000446690 OR1C1Q15619 314 aa8.43□□□□□ -1.06
COL6A4P1-201ENST00000446690 CSRP2Q16527 193 aa8.43□□□□□ -1.06
COL6A4P1-201ENST00000446690 SLC36A2Q495M3 483 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms