RNA–Protein interactions for RNA: ENST00000445336.2

BRAFP1-201, Transcript of BRAF pseudogene 1, humanhuman

BASIC

Gene BRAFP1, Length 2,703 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP1-201ENST00000445336 PNLIPRP3Q17RR3 467 aa4.84□□□□□ -1.63
BRAFP1-201ENST00000445336 RNF212Q495C1 297 aa4.84□□□□□ -1.63
BRAFP1-201ENST00000445336 ATP6AP1LQ52LC2 224 aa4.84□□□□□ -1.63
BRAFP1-201ENST00000445336 DCST2Q5T1A1 773 aa4.84□□□□□ -1.63
BRAFP1-201ENST00000445336 SMARCD3Q6STE5 483 aa4.84□□□□□ -1.63
BRAFP1-201ENST00000445336 FOXRED2Q8IWF2 684 aa4.84□□□□□ -1.63
BRAFP1-201ENST00000445336 EXT2Q93063 718 aa4.84□□□□□ -1.63
BRAFP1-201ENST00000445336 ZNF524Q96C55 264 aa4.84□□□□□ -1.63
BRAFP1-201ENST00000445336 WNT5BQ9H1J7 359 aa4.84□□□□□ -1.63
BRAFP1-201ENST00000445336 TPSG1Q9NRR2 321 aa4.84□□□□□ -1.63
BRAFP1-201ENST00000445336 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.84□□□□□ -1.63
BRAFP1-201ENST00000445336 ANO10Q9NW15 660 aa4.84□□□□□ -1.63
BRAFP1-201ENST00000445336 ACTR3BQ9P1U1 418 aa4.84□□□□□ -1.63
BRAFP1-201ENST00000445336 MSGN1A6NI15 193 aa4.84□□□□□ -1.63
BRAFP1-201ENST00000445336 BRI3O95415 125 aa4.84□□□□□ -1.63
BRAFP1-201ENST00000445336 AGR2O95994 175 aa4.84□□□□□ -1.63
BRAFP1-201ENST00000445336 AHSGP02765 367 aa4.84□□□□□ -1.63
BRAFP1-201ENST00000445336 PGAM1P18669 254 aa4.84□□□□□ -1.63
BRAFP1-201ENST00000445336 GABRB3P28472 473 aa4.84□□□□□ -1.63
BRAFP1-201ENST00000445336 MAGEA3P43357 314 aa4.84□□□□□ -1.63
BRAFP1-201ENST00000445336 SLC25A1P53007 311 aa4.84□□□□□ -1.63
BRAFP1-201ENST00000445336 BTKQ06187 659 aa4.84□□□□□ -1.63
BRAFP1-201ENST00000445336 PVRIGQ6DKI7 326 aa4.84□□□□□ -1.63
BRAFP1-201ENST00000445336 FBXW12Q6X9E4 464 aa4.84□□□□□ -1.63
BRAFP1-201ENST00000445336 MOGAT3Q86VF5 341 aa4.84□□□□□ -1.63
BRAFP1-201ENST00000445336 C16orf78Q8WTQ4 265 aa4.84□□□□□ -1.63
BRAFP1-201ENST00000445336 ACOT11Q8WXI4 607 aaPredicted RBP4.84□□□□□ -1.63
BRAFP1-201ENST00000445336 OR4C12Q96R67 309 aa4.84□□□□□ -1.63
BRAFP1-201ENST00000445336 ATPIF1Q9UII2 106 aa4.84□□□□□ -1.63
BRAFP1-201ENST00000445336 SNX6Q9UNH7 406 aa4.84□□□□□ -1.63
BRAFP1-201ENST00000445336 TMA7Q9Y2S6 64 aaKnown RBP4.84□□□□□ -1.63
BRAFP1-201ENST00000445336 PRSS47A8MTI9 375 aa4.83□□□□□ -1.64
BRAFP1-201ENST00000445336 IQCF6A8MYZ5 107 aa4.83□□□□□ -1.64
BRAFP1-201ENST00000445336 AP4M1O00189 453 aa4.83□□□□□ -1.64
BRAFP1-201ENST00000445336 FGF16O43320 207 aa4.83□□□□□ -1.64
BRAFP1-201ENST00000445336 IGHV1-8P0DP01 117 aa4.83□□□□□ -1.64
BRAFP1-201ENST00000445336 ACAA2P42765 397 aaKnown RBP4.83□□□□□ -1.64
BRAFP1-201ENST00000445336 RAB13P51153 203 aa4.83□□□□□ -1.64
BRAFP1-201ENST00000445336 NR1I3Q14994 352 aa4.83□□□□□ -1.64
BRAFP1-201ENST00000445336 CLEC12AQ5QGZ9 265 aa4.83□□□□□ -1.64
BRAFP1-201ENST00000445336 Q6ZWC4 215 aa4.83□□□□□ -1.64
BRAFP1-201ENST00000445336 SPATA12Q7Z6I5 190 aa4.83□□□□□ -1.64
BRAFP1-201ENST00000445336 SYT9Q86SS6 491 aa4.83□□□□□ -1.64
BRAFP1-201ENST00000445336 ALDH16A1Q8IZ83 802 aa4.83□□□□□ -1.64
BRAFP1-201ENST00000445336 Q8N402 240 aa4.83□□□□□ -1.64
BRAFP1-201ENST00000445336 RNF175Q8N4F7 328 aa4.83□□□□□ -1.64
BRAFP1-201ENST00000445336 ST8SIA4Q92187 359 aa4.83□□□□□ -1.64
BRAFP1-201ENST00000445336 MED30Q96HR3 178 aa4.83□□□□□ -1.64
BRAFP1-201ENST00000445336 FAM110AQ9BQ89 295 aa4.83□□□□□ -1.64
BRAFP1-201ENST00000445336 ECSITQ9BQ95 431 aa4.83□□□□□ -1.64
BRAFP1-201ENST00000445336 AHSA1O95433 338 aa4.83□□□□□ -1.64
BRAFP1-201ENST00000445336 GLIPR1P48060 266 aa4.83□□□□□ -1.64
BRAFP1-201ENST00000445336 TXNL4AP83876 142 aaKnown RBP4.83□□□□□ -1.64
BRAFP1-201ENST00000445336 TNP2Q05952 138 aa4.83□□□□□ -1.64
BRAFP1-201ENST00000445336 ACSM2AQ08AH3 577 aa4.83□□□□□ -1.64
BRAFP1-201ENST00000445336 PLA1AQ53H76 456 aa4.83□□□□□ -1.64
BRAFP1-201ENST00000445336 UEVLDQ8IX04 471 aa4.83□□□□□ -1.64
BRAFP1-201ENST00000445336 OR11H6Q8NGC7 330 aa4.83□□□□□ -1.64
BRAFP1-201ENST00000445336 OR56A1Q8NGH5 318 aa4.83□□□□□ -1.64
BRAFP1-201ENST00000445336 SFXN5Q8TD22 340 aa4.83□□□□□ -1.64
BRAFP1-201ENST00000445336 RASD2Q96D21 266 aa4.83□□□□□ -1.64
BRAFP1-201ENST00000445336 OR51J1Q9H342 316 aa4.83□□□□□ -1.64
BRAFP1-201ENST00000445336 CCDC134Q9H6E4 229 aa4.83□□□□□ -1.64
BRAFP1-201ENST00000445336 STX18Q9P2W9 335 aaKnown RBP4.83□□□□□ -1.64
BRAFP1-201ENST00000445336 AURKCQ9UQB9 309 aa4.83□□□□□ -1.64
BRAFP1-201ENST00000445336 MRPS28Q9Y2Q9 187 aaKnown RBP4.83□□□□□ -1.64
BRAFP1-201ENST00000445336 A0A0J9YWU9 116 aa4.82□□□□□ -1.64
BRAFP1-201ENST00000445336 CDHR4A6H8M9 788 aa4.82□□□□□ -1.64
BRAFP1-201ENST00000445336 DUXAA6NLW8 204 aa4.82□□□□□ -1.64
BRAFP1-201ENST00000445336 CLDN24A6NM45 220 aa4.82□□□□□ -1.64
BRAFP1-201ENST00000445336 H3BSH0 61 aa4.82□□□□□ -1.64
BRAFP1-201ENST00000445336 NR2C1P13056 603 aa4.82□□□□□ -1.64
BRAFP1-201ENST00000445336 CBLP22681 906 aa4.82□□□□□ -1.64
BRAFP1-201ENST00000445336 CSNK1A1P48729 337 aa4.82□□□□□ -1.64
BRAFP1-201ENST00000445336 PCBD1P61457 104 aa4.82□□□□□ -1.64
BRAFP1-201ENST00000445336 PITPNAQ00169 270 aa4.82□□□□□ -1.64
BRAFP1-201ENST00000445336 DLG1Q12959 904 aa4.82□□□□□ -1.64
BRAFP1-201ENST00000445336 RBMS2Q15434 407 aaKnown RBP4.82□□□□□ -1.64
BRAFP1-201ENST00000445336 HSP90AA5PQ58FG0 334 aa4.82□□□□□ -1.64
BRAFP1-201ENST00000445336 LCN12Q6JVE5 192 aa4.82□□□□□ -1.64
BRAFP1-201ENST00000445336 Q6ZRM9 215 aa4.82□□□□□ -1.64
BRAFP1-201ENST00000445336 HDDC2Q7Z4H3 204 aa4.82□□□□□ -1.64
BRAFP1-201ENST00000445336 THNSL2Q86YJ6 484 aa4.82□□□□□ -1.64
BRAFP1-201ENST00000445336 CLDN22Q8N7P3 220 aa4.82□□□□□ -1.64
BRAFP1-201ENST00000445336 ATG16L2Q8NAA4 619 aa4.82□□□□□ -1.64
BRAFP1-201ENST00000445336 OR5L1Q8NGL2 311 aa4.82□□□□□ -1.64
BRAFP1-201ENST00000445336 OR1N2Q8NGR9 330 aa4.82□□□□□ -1.64
BRAFP1-201ENST00000445336 OR13D1Q8NGV5 346 aa4.82□□□□□ -1.64
BRAFP1-201ENST00000445336 RFWD2Q8NHY2 731 aa4.82□□□□□ -1.64
BRAFP1-201ENST00000445336 C4orf45Q96LM5 186 aa4.82□□□□□ -1.64
BRAFP1-201ENST00000445336 UBE2E2Q96LR5 201 aa4.82□□□□□ -1.64
BRAFP1-201ENST00000445336 ARPC5LQ9BPX5 153 aa4.82□□□□□ -1.64
BRAFP1-201ENST00000445336 HRH4Q9H3N8 390 aa4.82□□□□□ -1.64
BRAFP1-201ENST00000445336 CCNB1IP1Q9NPC3 277 aa4.82□□□□□ -1.64
BRAFP1-201ENST00000445336 VPS29Q9UBQ0 182 aa4.82□□□□□ -1.64
BRAFP1-201ENST00000445336 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.82□□□□□ -1.64
BRAFP1-201ENST00000445336 OOSP1A8MZH6 123 aa4.82□□□□□ -1.64
BRAFP1-201ENST00000445336 M0R3G1 203 aa4.82□□□□□ -1.64
BRAFP1-201ENST00000445336 PNMTP11086 282 aa4.82□□□□□ -1.64
BRAFP1-201ENST00000445336 RPS5P46782 204 aaKnown RBP4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms