RNA–Protein interactions for RNA: ENST00000445241.5

PTPA-222, Transcript of protein phosphatase 2 phosphatase activator, human

TSL 3

Gene PTPA, Length 949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPA-222	ENST00000445241	COMMD3-BMI1	R4GMX3	469 aa		12.6	□□□□□ -0.39
PTPA-222	ENST00000445241	CHD3	Q12873	2000 aa	Known RBP	12.6	□□□□□ -0.39
PTPA-222	ENST00000445241	IGLV3-9	A0A075B6K5	115 aa		12.59	□□□□□ -0.39
PTPA-222	ENST00000445241	RER1	O15258	196 aa		12.59	□□□□□ -0.39
PTPA-222	ENST00000445241	GPRIN2	O60269	458 aa		12.59	□□□□□ -0.39
PTPA-222	ENST00000445241	GLCE	O94923	617 aa		12.59	□□□□□ -0.39
PTPA-222	ENST00000445241	ALPL	P05186	524 aa		12.59	□□□□□ -0.39
PTPA-222	ENST00000445241	ERCC1	P07992	297 aa	Predicted RBP	12.59	□□□□□ -0.39
PTPA-222	ENST00000445241	CCL2	P13500	99 aa		12.59	□□□□□ -0.39
PTPA-222	ENST00000445241	ENTPD1	P49961	510 aa		12.59	□□□□□ -0.39
PTPA-222	ENST00000445241	ADAM8	P78325	824 aa		12.59	□□□□□ -0.39
PTPA-222	ENST00000445241	MEP1B	Q16820	701 aa		12.59	□□□□□ -0.39
PTPA-222	ENST00000445241		Q5PR19	223 aa		12.59	□□□□□ -0.39
PTPA-222	ENST00000445241	LINC01590	Q5TEZ4	76 aa		12.59	□□□□□ -0.39
PTPA-222	ENST00000445241	SLX4IP	Q5VYV7	408 aa		12.59	□□□□□ -0.39
PTPA-222	ENST00000445241	VHLL	Q6RSH7	139 aa		12.59	□□□□□ -0.39
PTPA-222	ENST00000445241	TGIF2LY	Q8IUE0	185 aa		12.59	□□□□□ -0.39
PTPA-222	ENST00000445241	KRTAP1-3	Q8IUG1	177 aa		12.59	□□□□□ -0.39
PTPA-222	ENST00000445241	PQLC1	Q8N2U9	271 aa		12.59	□□□□□ -0.39
PTPA-222	ENST00000445241	ICA1L	Q8NDH6	482 aa		12.59	□□□□□ -0.39
PTPA-222	ENST00000445241	OR9Q1	Q8NGQ5	310 aa		12.59	□□□□□ -0.39
PTPA-222	ENST00000445241	C4orf45	Q96LM5	186 aa		12.59	□□□□□ -0.39
PTPA-222	ENST00000445241	DOK1	Q99704	481 aa		12.59	□□□□□ -0.39
PTPA-222	ENST00000445241	CIB1	Q99828	191 aa		12.59	□□□□□ -0.39
PTPA-222	ENST00000445241	MYOZ1	Q9NP98	299 aa	Predicted RBP	12.59	□□□□□ -0.39
PTPA-222	ENST00000445241	SLCO1C1	Q9NYB5	712 aa		12.59	□□□□□ -0.39
PTPA-222	ENST00000445241	GDF2	Q9UK05	429 aa	Predicted RBP	12.59	□□□□□ -0.39
PTPA-222	ENST00000445241	MED13L	Q71F56	2210 aa		12.59	□□□□□ -0.39
PTPA-222	ENST00000445241	TMEM129	A0AVI4	362 aa		12.58	□□□□□ -0.4
PTPA-222	ENST00000445241	SAC3D1	A6NKF1	404 aa		12.58	□□□□□ -0.4
PTPA-222	ENST00000445241	ABHD16A	O95870	558 aa		12.58	□□□□□ -0.4
PTPA-222	ENST00000445241	LCK	P06239	509 aa		12.58	□□□□□ -0.4
PTPA-222	ENST00000445241	CSF3	P09919	207 aa		12.58	□□□□□ -0.4
PTPA-222	ENST00000445241	CCNO	P22674	350 aa		12.58	□□□□□ -0.4
PTPA-222	ENST00000445241	CDKN1A	P38936	164 aa		12.58	□□□□□ -0.4
PTPA-222	ENST00000445241	WNT5A	P41221	380 aa		12.58	□□□□□ -0.4
PTPA-222	ENST00000445241	ALDH3A2	P51648	485 aa		12.58	□□□□□ -0.4
PTPA-222	ENST00000445241	EFNA4	P52798	201 aa		12.58	□□□□□ -0.4
PTPA-222	ENST00000445241	RAD23A	P54725	363 aa		12.58	□□□□□ -0.4
PTPA-222	ENST00000445241	KLF3	P57682	345 aa	Predicted RBP	12.58	□□□□□ -0.4
PTPA-222	ENST00000445241	DSCR9	P59020	149 aa		12.58	□□□□□ -0.4
PTPA-222	ENST00000445241	SNAPC1	Q16533	368 aa		12.58	□□□□□ -0.4
PTPA-222	ENST00000445241	KRTAP27-1	Q3LI81	207 aa		12.58	□□□□□ -0.4
PTPA-222	ENST00000445241	ZNF718	Q3SXZ3	478 aa		12.58	□□□□□ -0.4
PTPA-222	ENST00000445241	MBNL2	Q5VZF2	373 aa	Known RBP	12.58	□□□□□ -0.4
PTPA-222	ENST00000445241	C12orf73	Q69YU5	71 aa		12.58	□□□□□ -0.4
PTPA-222	ENST00000445241	SHF	Q7M4L6	423 aa		12.58	□□□□□ -0.4
PTPA-222	ENST00000445241	CPO	Q8IVL8	374 aa		12.58	□□□□□ -0.4
PTPA-222	ENST00000445241	OR6K6	Q8NGW6	343 aa		12.58	□□□□□ -0.4
PTPA-222	ENST00000445241	SYNPR	Q8TBG9	265 aa		12.58	□□□□□ -0.4
PTPA-222	ENST00000445241	ATF6B	Q99941	703 aa		12.58	□□□□□ -0.4
PTPA-222	ENST00000445241	C9orf16	Q9BUW7	83 aa		12.58	□□□□□ -0.4
PTPA-222	ENST00000445241	MS4A5	Q9H3V2	200 aa		12.58	□□□□□ -0.4
PTPA-222	ENST00000445241	HINT3	Q9NQE9	182 aa	Known RBP	12.58	□□□□□ -0.4
PTPA-222	ENST00000445241	DDX28	Q9NUL7	540 aa	Known RBP	12.58	□□□□□ -0.4
PTPA-222	ENST00000445241	TVP23B	Q9NYZ1	205 aa		12.58	□□□□□ -0.4
PTPA-222	ENST00000445241	CGGBP1	Q9UFW8	167 aa	Predicted RBP	12.58	□□□□□ -0.4
PTPA-222	ENST00000445241	MAP1A	P78559	2803 aa	Predicted RBP	12.57	□□□□□ -0.4
PTPA-222	ENST00000445241	FAM183A	A6NL82	134 aa		12.57	□□□□□ -0.4
PTPA-222	ENST00000445241	FAM171A2	A8MVW0	826 aa		12.57	□□□□□ -0.4
PTPA-222	ENST00000445241		M0R233	179 aa		12.57	□□□□□ -0.4
PTPA-222	ENST00000445241	MITF	O75030	526 aa	Predicted RBP	12.57	□□□□□ -0.4
PTPA-222	ENST00000445241	GPANK1	O95872	356 aa		12.57	□□□□□ -0.4
PTPA-222	ENST00000445241	IGHV3-13	P01766	116 aa		12.57	□□□□□ -0.4
PTPA-222	ENST00000445241	IGHV4-39	P01824	125 aa		12.57	□□□□□ -0.4
PTPA-222	ENST00000445241	GYPB	P06028	91 aa		12.57	□□□□□ -0.4
PTPA-222	ENST00000445241	FAM157B	P0CG42	384 aa		12.57	□□□□□ -0.4
PTPA-222	ENST00000445241	SLC2A5	P22732	501 aa		12.57	□□□□□ -0.4
PTPA-222	ENST00000445241	GSTT1	P30711	240 aa		12.57	□□□□□ -0.4
PTPA-222	ENST00000445241	NUDT6	P53370	316 aa		12.57	□□□□□ -0.4
PTPA-222	ENST00000445241	PPP1CB	P62140	327 aa		12.57	□□□□□ -0.4
PTPA-222	ENST00000445241	EFNB1	P98172	346 aa		12.57	□□□□□ -0.4
PTPA-222	ENST00000445241	TMEM236	Q5W0B7	351 aa		12.57	□□□□□ -0.4
PTPA-222	ENST00000445241	PLBD1	Q6P4A8	553 aa		12.57	□□□□□ -0.4
PTPA-222	ENST00000445241	CXXC5	Q7LFL8	322 aa	Known RBP	12.57	□□□□□ -0.4
PTPA-222	ENST00000445241	ZNF101	Q8IZC7	436 aa		12.57	□□□□□ -0.4
PTPA-222	ENST00000445241	OR51L1	Q8NGJ5	315 aa		12.57	□□□□□ -0.4
PTPA-222	ENST00000445241	OR1J1	Q8NGS3	322 aa		12.57	□□□□□ -0.4
PTPA-222	ENST00000445241	ZNRF4	Q8WWF5	429 aa		12.57	□□□□□ -0.4
PTPA-222	ENST00000445241	NEU4	Q8WWR8	484 aa	Predicted RBP	12.57	□□□□□ -0.4
PTPA-222	ENST00000445241	APOBEC3D	Q96AK3	386 aa	Predicted RBP	12.57	□□□□□ -0.4
PTPA-222	ENST00000445241	MARS2	Q96GW9	593 aa	Known RBP	12.57	□□□□□ -0.4
PTPA-222	ENST00000445241	INTS14	Q96SY0	518 aa		12.57	□□□□□ -0.4
PTPA-222	ENST00000445241	PITX2	Q99697	317 aa		12.57	□□□□□ -0.4
PTPA-222	ENST00000445241	HCAR1	Q9BXC0	346 aa		12.57	□□□□□ -0.4
PTPA-222	ENST00000445241	MRPL37	Q9BZE1	423 aa	Known RBP	12.57	□□□□□ -0.4
PTPA-222	ENST00000445241	RAB1B	Q9H0U4	201 aa		12.57	□□□□□ -0.4
PTPA-222	ENST00000445241	PNRC2	Q9NPJ4	139 aa	Known RBP	12.57	□□□□□ -0.4
PTPA-222	ENST00000445241	C8orf4	Q9NR00	106 aa		12.57	□□□□□ -0.4
PTPA-222	ENST00000445241	FLNA	P21333	2647 aa	Known RBP	12.57	□□□□□ -0.4
PTPA-222	ENST00000445241	HIVEP1	P15822	2718 aa		12.56	□□□□□ -0.4
PTPA-222	ENST00000445241	ZNF593	O00488	134 aa	Predicted RBP	12.56	□□□□□ -0.4
PTPA-222	ENST00000445241	EI24	O14681	340 aa		12.56	□□□□□ -0.4
PTPA-222	ENST00000445241	F12	P00748	615 aa	Predicted RBP	12.56	□□□□□ -0.4
PTPA-222	ENST00000445241	MT-ND5	P03915	603 aa		12.56	□□□□□ -0.4
PTPA-222	ENST00000445241	CLU	P10909	449 aa		12.56	□□□□□ -0.4
PTPA-222	ENST00000445241	FOSL1	P15407	271 aa		12.56	□□□□□ -0.4
PTPA-222	ENST00000445241	GCH1	P30793	250 aa		12.56	□□□□□ -0.4
PTPA-222	ENST00000445241	OTX1	P32242	354 aa	Predicted RBP	12.56	□□□□□ -0.4
PTPA-222	ENST00000445241	LIPA	P38571	399 aa		12.56	□□□□□ -0.4

Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms