RNA–Protein interactions for RNA: ENST00000444061.7

SMARCA4-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 4,938 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-204ENST00000444061 MOGAT1Q96PD6 335 aa12.64□□□□□ -0.39
SMARCA4-204ENST00000444061 FLRT3Q9NZU0 649 aa12.64□□□□□ -0.39
SMARCA4-204ENST00000444061 EFSO43281 561 aa12.64□□□□□ -0.39
SMARCA4-204ENST00000444061 RP2O75695 350 aa12.64□□□□□ -0.39
SMARCA4-204ENST00000444061 IFI6P09912 130 aa12.64□□□□□ -0.39
SMARCA4-204ENST00000444061 APEHP13798 732 aaKnown RBP12.64□□□□□ -0.39
SMARCA4-204ENST00000444061 ZNF17P17021 662 aa12.64□□□□□ -0.39
SMARCA4-204ENST00000444061 ACHEP22303 614 aa12.64□□□□□ -0.39
SMARCA4-204ENST00000444061 HTR2AP28223 471 aa12.64□□□□□ -0.39
SMARCA4-204ENST00000444061 IGLV3-21P80748 117 aaPredicted RBP12.64□□□□□ -0.39
SMARCA4-204ENST00000444061 YIF1BQ5BJH7 314 aa12.64□□□□□ -0.39
SMARCA4-204ENST00000444061 C1QL3Q5VWW1 255 aa12.64□□□□□ -0.39
SMARCA4-204ENST00000444061 CSNK2A3Q8NEV1 391 aa12.64□□□□□ -0.39
SMARCA4-204ENST00000444061 QPCTLQ9NXS2 382 aa12.64□□□□□ -0.39
SMARCA4-204ENST00000444061 HIF3AQ9Y2N7 669 aa12.64□□□□□ -0.39
SMARCA4-204ENST00000444061 RAXQ9Y2V3 346 aa12.64□□□□□ -0.39
SMARCA4-204ENST00000444061 ZFC3H1O60293 1989 aaKnown RBP12.64□□□□□ -0.39
SMARCA4-204ENST00000444061 ZFHX2Q9C0A1 2572 aaPredicted RBP12.64□□□□□ -0.39
SMARCA4-204ENST00000444061 A0A1W2PQL4 384 aaPredicted RBP12.64□□□□□ -0.39
SMARCA4-204ENST00000444061 SLC22A23A1A5C7 686 aa12.64□□□□□ -0.39
SMARCA4-204ENST00000444061 LIPT2A6NK58 231 aa12.64□□□□□ -0.39
SMARCA4-204ENST00000444061 PLPP3O14495 311 aa12.64□□□□□ -0.39
SMARCA4-204ENST00000444061 GALEQ14376 348 aa12.64□□□□□ -0.39
SMARCA4-204ENST00000444061 COX15Q7KZN9 410 aa12.64□□□□□ -0.39
SMARCA4-204ENST00000444061 BBS1Q8NFJ9 593 aa12.64□□□□□ -0.39
SMARCA4-204ENST00000444061 PAQR8Q8TEZ7 354 aa12.64□□□□□ -0.39
SMARCA4-204ENST00000444061 SYNPO2LQ9H987 977 aa12.64□□□□□ -0.39
SMARCA4-204ENST00000444061 NOX4Q9NPH5 578 aa12.64□□□□□ -0.39
SMARCA4-204ENST00000444061 DOCK4Q8N1I0 1966 aa12.63□□□□□ -0.39
SMARCA4-204ENST00000444061 PLXNA3P51805 1871 aa12.63□□□□□ -0.39
SMARCA4-204ENST00000444061 NYNRINQ9P2P1 1898 aaKnown RBP12.63□□□□□ -0.39
SMARCA4-204ENST00000444061 HCCSP53701 268 aa12.63□□□□□ -0.39
SMARCA4-204ENST00000444061 ISL1P61371 349 aa12.63□□□□□ -0.39
SMARCA4-204ENST00000444061 IKZF1Q13422 519 aa12.63□□□□□ -0.39
SMARCA4-204ENST00000444061 TPRA1Q86W33 373 aa12.63□□□□□ -0.39
SMARCA4-204ENST00000444061 FAM71CQ8NEG0 241 aa12.63□□□□□ -0.39
SMARCA4-204ENST00000444061 PLA2G12AQ9BZM1 189 aa12.63□□□□□ -0.39
SMARCA4-204ENST00000444061 NELFAQ9H3P2 528 aa12.63□□□□□ -0.39
SMARCA4-204ENST00000444061 ZNF175Q9Y473 711 aa12.63□□□□□ -0.39
SMARCA4-204ENST00000444061 IGKV1D-16P01601 117 aa12.63□□□□□ -0.39
SMARCA4-204ENST00000444061 GNRHRP30968 328 aa12.63□□□□□ -0.39
SMARCA4-204ENST00000444061 OR5H2Q8NGV7 314 aa12.63□□□□□ -0.39
SMARCA4-204ENST00000444061 FBXO17Q96EF6 278 aa12.63□□□□□ -0.39
SMARCA4-204ENST00000444061 ACOXLQ9NUZ1 547 aa12.63□□□□□ -0.39
SMARCA4-204ENST00000444061 BDP1A6H8Y1 2624 aa12.63□□□□□ -0.39
SMARCA4-204ENST00000444061 NKX6-3A6NJ46 265 aa12.63□□□□□ -0.39
SMARCA4-204ENST00000444061 CDX4O14627 284 aaPredicted RBP12.63□□□□□ -0.39
SMARCA4-204ENST00000444061 HOXD4P09016 255 aaPredicted RBP12.63□□□□□ -0.39
SMARCA4-204ENST00000444061 RBMXP38159 391 aaKnown RBP12.63□□□□□ -0.39
SMARCA4-204ENST00000444061 KLRB1Q12918 225 aa12.63□□□□□ -0.39
SMARCA4-204ENST00000444061 TMEM108Q6UXF1 575 aa12.63□□□□□ -0.39
SMARCA4-204ENST00000444061 TUSC5Q8IXB3 177 aa12.63□□□□□ -0.39
SMARCA4-204ENST00000444061 Q8N402 240 aa12.63□□□□□ -0.39
SMARCA4-204ENST00000444061 OR51E1Q8TCB6 317 aa12.63□□□□□ -0.39
SMARCA4-204ENST00000444061 TXNDC15Q96J42 360 aa12.63□□□□□ -0.39
SMARCA4-204ENST00000444061 SLC6A7Q99884 636 aa12.63□□□□□ -0.39
SMARCA4-204ENST00000444061 GON7Q9BXV9 100 aa12.63□□□□□ -0.39
SMARCA4-204ENST00000444061 SIAEQ9HAT2 523 aa12.63□□□□□ -0.39
SMARCA4-204ENST00000444061 ENY2Q9NPA8 101 aa12.63□□□□□ -0.39
SMARCA4-204ENST00000444061 ZNF69Q9UC07 566 aa12.63□□□□□ -0.39
SMARCA4-204ENST00000444061 FRMPD3Q5JV73 1810 aa12.63□□□□□ -0.39
SMARCA4-204ENST00000444061 FMODQ06828 376 aa12.63□□□□□ -0.39
SMARCA4-204ENST00000444061 OR1J1Q8NGS3 322 aa12.63□□□□□ -0.39
SMARCA4-204ENST00000444061 LILRB4Q8NHJ6 448 aa12.63□□□□□ -0.39
SMARCA4-204ENST00000444061 MBOAT4Q96T53 435 aa12.63□□□□□ -0.39
SMARCA4-204ENST00000444061 UFSP2Q9NUQ7 469 aa12.63□□□□□ -0.39
SMARCA4-204ENST00000444061 A0A1W2PR80 420 aa12.62□□□□□ -0.39
SMARCA4-204ENST00000444061 A8MV72 311 aaPredicted RBP12.62□□□□□ -0.39
SMARCA4-204ENST00000444061 DNPH1O43598 174 aa12.62□□□□□ -0.39
SMARCA4-204ENST00000444061 EDN3P14138 238 aa12.62□□□□□ -0.39
SMARCA4-204ENST00000444061 CFHR1Q03591 330 aa12.62□□□□□ -0.39
SMARCA4-204ENST00000444061 TIPARPQ7Z3E1 657 aaKnown RBP12.62□□□□□ -0.39
SMARCA4-204ENST00000444061 OR14A2Q96R54 314 aa12.62□□□□□ -0.39
SMARCA4-204ENST00000444061 TAS2R8Q9NYW2 309 aa12.62□□□□□ -0.39
SMARCA4-204ENST00000444061 ING1Q9UK53 422 aaPredicted RBP12.62□□□□□ -0.39
SMARCA4-204ENST00000444061 MRPS28Q9Y2Q9 187 aaKnown RBP12.62□□□□□ -0.39
SMARCA4-204ENST00000444061 LOC107986453A0A1B0GWG9 222 aa12.62□□□□□ -0.39
SMARCA4-204ENST00000444061 CAPNS1P04632 268 aa12.62□□□□□ -0.39
SMARCA4-204ENST00000444061 LPLP06858 475 aa12.62□□□□□ -0.39
SMARCA4-204ENST00000444061 DNASE1P24855 282 aa12.62□□□□□ -0.39
SMARCA4-204ENST00000444061 VAMP2P63027 116 aa12.62□□□□□ -0.39
SMARCA4-204ENST00000444061 EGR3Q06889 387 aa12.62□□□□□ -0.39
SMARCA4-204ENST00000444061 FBXL14Q8N1E6 418 aa12.62□□□□□ -0.39
SMARCA4-204ENST00000444061 SLC22A24Q8N4F4 322 aa12.62□□□□□ -0.39
SMARCA4-204ENST00000444061 OR5M11Q96RB7 305 aa12.62□□□□□ -0.39
SMARCA4-204ENST00000444061 NRIP3Q9NQ35 241 aa12.62□□□□□ -0.39
SMARCA4-204ENST00000444061 CLEC2DQ9UHP7 191 aa12.62□□□□□ -0.39
SMARCA4-204ENST00000444061 SLC34A2O95436 690 aa12.62□□□□□ -0.39
SMARCA4-204ENST00000444061 ZNF93P35789 620 aaPredicted RBP12.62□□□□□ -0.39
SMARCA4-204ENST00000444061 RAB12Q6IQ22 244 aa12.62□□□□□ -0.39
SMARCA4-204ENST00000444061 WDR88Q6ZMY6 472 aa12.62□□□□□ -0.39
SMARCA4-204ENST00000444061 NOXA1Q86UR1 476 aa12.62□□□□□ -0.39
SMARCA4-204ENST00000444061 CASTOR1Q8WTX7 329 aa12.62□□□□□ -0.39
SMARCA4-204ENST00000444061 ADIPOR1Q96A54 375 aa12.62□□□□□ -0.39
SMARCA4-204ENST00000444061 PDCD1LG2Q9BQ51 273 aa12.62□□□□□ -0.39
SMARCA4-204ENST00000444061 TMEM59Q9BXS4 323 aa12.62□□□□□ -0.39
SMARCA4-204ENST00000444061 NOTCH4Q99466 2003 aa12.62□□□□□ -0.39
SMARCA4-204ENST00000444061 ANKRD33BA6NCL7 494 aa12.62□□□□□ -0.39
SMARCA4-204ENST00000444061 MCRIP1C9JLW8 97 aa12.62□□□□□ -0.39
SMARCA4-204ENST00000444061 OIP5O43482 229 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms