RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-210ENST00000442216 WNT5AP41221 380 aa12.93□□□□□ -0.34
CSNK1E-210ENST00000442216 SELENOVP59797 346 aa12.93□□□□□ -0.34
CSNK1E-210ENST00000442216 ECH1Q13011 328 aa12.93□□□□□ -0.34
CSNK1E-210ENST00000442216 PCK2Q16822 640 aa12.93□□□□□ -0.34
CSNK1E-210ENST00000442216 MSMPQ1L6U9 139 aa12.93□□□□□ -0.34
CSNK1E-210ENST00000442216 LINC01590Q5TEZ4 76 aa12.93□□□□□ -0.34
CSNK1E-210ENST00000442216 ICA1LQ8NDH6 482 aa12.93□□□□□ -0.34
CSNK1E-210ENST00000442216 WFDC11Q8NEX6 87 aa12.93□□□□□ -0.34
CSNK1E-210ENST00000442216 ZNRF4Q8WWF5 429 aa12.93□□□□□ -0.34
CSNK1E-210ENST00000442216 C4orf45Q96LM5 186 aa12.93□□□□□ -0.34
CSNK1E-210ENST00000442216 COG8Q96MW5 612 aa12.93□□□□□ -0.34
CSNK1E-210ENST00000442216 MRPL37Q9BZE1 423 aaKnown RBP12.93□□□□□ -0.34
CSNK1E-210ENST00000442216 S100A14Q9HCY8 104 aa12.93□□□□□ -0.34
CSNK1E-210ENST00000442216 TMEFF2Q9UIK5 374 aaPredicted RBP12.93□□□□□ -0.34
CSNK1E-210ENST00000442216 COMMD3-BMI1R4GMX3 469 aa12.93□□□□□ -0.34
CSNK1E-210ENST00000442216 GLCEO94923 617 aa12.92□□□□□ -0.34
CSNK1E-210ENST00000442216 GYPBP06028 91 aa12.92□□□□□ -0.34
CSNK1E-210ENST00000442216 IGFBP5P24593 272 aa12.92□□□□□ -0.34
CSNK1E-210ENST00000442216 RGS6P49758 472 aa12.92□□□□□ -0.34
CSNK1E-210ENST00000442216 ENTPD1P49961 510 aa12.92□□□□□ -0.34
CSNK1E-210ENST00000442216 EFNA4P52798 201 aa12.92□□□□□ -0.34
CSNK1E-210ENST00000442216 SNAPC1Q16533 368 aa12.92□□□□□ -0.34
CSNK1E-210ENST00000442216 MOGQ16653 247 aa12.92□□□□□ -0.34
CSNK1E-210ENST00000442216 ZNF718Q3SXZ3 478 aa12.92□□□□□ -0.34
CSNK1E-210ENST00000442216 SLC35D3Q5M8T2 416 aa12.92□□□□□ -0.34
CSNK1E-210ENST00000442216 TMEM236Q5W0B7 351 aa12.92□□□□□ -0.34
CSNK1E-210ENST00000442216 OTPQ5XKR4 325 aa12.92□□□□□ -0.34
CSNK1E-210ENST00000442216 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.92□□□□□ -0.34
CSNK1E-210ENST00000442216 ZNF101Q8IZC7 436 aa12.92□□□□□ -0.34
CSNK1E-210ENST00000442216 OR51L1Q8NGJ5 315 aa12.92□□□□□ -0.34
CSNK1E-210ENST00000442216 OR1J1Q8NGS3 322 aa12.92□□□□□ -0.34
CSNK1E-210ENST00000442216 SYNPRQ8TBG9 265 aa12.92□□□□□ -0.34
CSNK1E-210ENST00000442216 TMUB1Q9BVT8 246 aa12.92□□□□□ -0.34
CSNK1E-210ENST00000442216 RAB1BQ9H0U4 201 aa12.92□□□□□ -0.34
CSNK1E-210ENST00000442216 MS4A5Q9H3V2 200 aa12.92□□□□□ -0.34
CSNK1E-210ENST00000442216 MARCH7Q9H992 704 aa12.92□□□□□ -0.34
CSNK1E-210ENST00000442216 USE1Q9NZ43 259 aa12.92□□□□□ -0.34
CSNK1E-210ENST00000442216 GPR160Q9UJ42 338 aa12.92□□□□□ -0.34
CSNK1E-210ENST00000442216 GDF2Q9UK05 429 aaPredicted RBP12.92□□□□□ -0.34
CSNK1E-210ENST00000442216 ITPR3Q14573 2671 aa12.92□□□□□ -0.34
CSNK1E-210ENST00000442216 TVP23AA6NH52 213 aa12.91□□□□□ -0.34
CSNK1E-210ENST00000442216 SAC3D1A6NKF1 404 aa12.91□□□□□ -0.34
CSNK1E-210ENST00000442216 FAM183AA6NL82 134 aa12.91□□□□□ -0.34
CSNK1E-210ENST00000442216 ZAR1LA6NP61 321 aa12.91□□□□□ -0.34
CSNK1E-210ENST00000442216 M0R233 179 aa12.91□□□□□ -0.34
CSNK1E-210ENST00000442216 MITFO75030 526 aaPredicted RBP12.91□□□□□ -0.34
CSNK1E-210ENST00000442216 ABHD16AO95870 558 aa12.91□□□□□ -0.34
CSNK1E-210ENST00000442216 F12P00748 615 aaPredicted RBP12.91□□□□□ -0.34
CSNK1E-210ENST00000442216 ERCC1P07992 297 aaPredicted RBP12.91□□□□□ -0.34
CSNK1E-210ENST00000442216 CLUP10909 449 aa12.91□□□□□ -0.34
CSNK1E-210ENST00000442216 KLF3P57682 345 aaPredicted RBP12.91□□□□□ -0.34
CSNK1E-210ENST00000442216 DSCR9P59020 149 aa12.91□□□□□ -0.34
CSNK1E-210ENST00000442216 DBPQ10586 325 aaPredicted RBP12.91□□□□□ -0.34
CSNK1E-210ENST00000442216 ZSCAN26Q16670 478 aa12.91□□□□□ -0.34
CSNK1E-210ENST00000442216 SLX4IPQ5VYV7 408 aa12.91□□□□□ -0.34
CSNK1E-210ENST00000442216 MBNL2Q5VZF2 373 aaKnown RBP12.91□□□□□ -0.34
CSNK1E-210ENST00000442216 PLBD1Q6P4A8 553 aa12.91□□□□□ -0.34
CSNK1E-210ENST00000442216 CORO6Q6QEF8 472 aa12.91□□□□□ -0.34
CSNK1E-210ENST00000442216 DNM1P46Q6ZS02 220 aa12.91□□□□□ -0.34
CSNK1E-210ENST00000442216 CPOQ8IVL8 374 aa12.91□□□□□ -0.34
CSNK1E-210ENST00000442216 LINC00346Q8IVM7 164 aa12.91□□□□□ -0.34
CSNK1E-210ENST00000442216 ZNF511Q8NB15 262 aa12.91□□□□□ -0.34
CSNK1E-210ENST00000442216 OR6K6Q8NGW6 343 aa12.91□□□□□ -0.34
CSNK1E-210ENST00000442216 MARS2Q96GW9 593 aaKnown RBP12.91□□□□□ -0.34
CSNK1E-210ENST00000442216 CIB1Q99828 191 aa12.91□□□□□ -0.34
CSNK1E-210ENST00000442216 ATF6BQ99941 703 aa12.91□□□□□ -0.34
CSNK1E-210ENST00000442216 HCAR1Q9BXC0 346 aa12.91□□□□□ -0.34
CSNK1E-210ENST00000442216 GABARAPL3Q9BY60 117 aa12.91□□□□□ -0.34
CSNK1E-210ENST00000442216 HINT3Q9NQE9 182 aaKnown RBP12.91□□□□□ -0.34
CSNK1E-210ENST00000442216 SLCO1C1Q9NYB5 712 aa12.91□□□□□ -0.34
CSNK1E-210ENST00000442216 TVP23BQ9NYZ1 205 aa12.91□□□□□ -0.34
CSNK1E-210ENST00000442216 ZNF593O00488 134 aaPredicted RBP12.9□□□□□ -0.34
CSNK1E-210ENST00000442216 NDUFS7O75251 213 aa12.9□□□□□ -0.34
CSNK1E-210ENST00000442216 IGHV3-13P01766 116 aa12.9□□□□□ -0.34
CSNK1E-210ENST00000442216 ALPLP05186 524 aa12.9□□□□□ -0.34
CSNK1E-210ENST00000442216 CSF3P09919 207 aa12.9□□□□□ -0.34
CSNK1E-210ENST00000442216 FOSL1P15407 271 aa12.9□□□□□ -0.34
CSNK1E-210ENST00000442216 GCH1P30793 250 aa12.9□□□□□ -0.34
CSNK1E-210ENST00000442216 NUDT6P53370 316 aa12.9□□□□□ -0.34
CSNK1E-210ENST00000442216 ERVS71-1P61550 626 aa12.9□□□□□ -0.34
CSNK1E-210ENST00000442216 PPP1CBP62140 327 aa12.9□□□□□ -0.34
CSNK1E-210ENST00000442216 CLEC12BQ2HXU8 276 aa12.9□□□□□ -0.34
CSNK1E-210ENST00000442216 KRTAP27-1Q3LI81 207 aa12.9□□□□□ -0.34
CSNK1E-210ENST00000442216 C12orf73Q69YU5 71 aa12.9□□□□□ -0.34
CSNK1E-210ENST00000442216 CFAP77Q6ZQR2 320 aa12.9□□□□□ -0.34
CSNK1E-210ENST00000442216 RHOUQ7L0Q8 258 aa12.9□□□□□ -0.34
CSNK1E-210ENST00000442216 CXXC5Q7LFL8 322 aaKnown RBP12.9□□□□□ -0.34
CSNK1E-210ENST00000442216 SHFQ7M4L6 423 aa12.9□□□□□ -0.34
CSNK1E-210ENST00000442216 PQLC1Q8N2U9 271 aa12.9□□□□□ -0.34
CSNK1E-210ENST00000442216 ABHD4Q8TB40 342 aa12.9□□□□□ -0.34
CSNK1E-210ENST00000442216 SLC25A40Q8TBP6 338 aa12.9□□□□□ -0.34
CSNK1E-210ENST00000442216 NEU4Q8WWR8 484 aaPredicted RBP12.9□□□□□ -0.34
CSNK1E-210ENST00000442216 STMN2Q93045 179 aa12.9□□□□□ -0.34
CSNK1E-210ENST00000442216 OTULINQ96BN8 352 aa12.9□□□□□ -0.34
CSNK1E-210ENST00000442216 MAP6Q96JE9 813 aa12.9□□□□□ -0.34
CSNK1E-210ENST00000442216 Q96MF0 132 aa12.9□□□□□ -0.34
CSNK1E-210ENST00000442216 SORCS2Q96PQ0 1159 aa12.9□□□□□ -0.34
CSNK1E-210ENST00000442216 INTS14Q96SY0 518 aa12.9□□□□□ -0.34
CSNK1E-210ENST00000442216 PITX2Q99697 317 aa12.9□□□□□ -0.34
CSNK1E-210ENST00000442216 VRK1Q99986 396 aaPredicted RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms