RNA–Protein interactions for RNA: ENST00000441703.5

HDAC6-210, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-210ENST00000441703 KLHL36Q8N4N3 616 aa5.74□□□□□ -1.49
HDAC6-210ENST00000441703 ZNF527Q8NB42 609 aa5.74□□□□□ -1.49
HDAC6-210ENST00000441703 FBXO15Q8NCQ5 510 aaPredicted RBP5.74□□□□□ -1.49
HDAC6-210ENST00000441703 BPIFCQ8NFQ6 507 aa5.74□□□□□ -1.49
HDAC6-210ENST00000441703 OR5T3Q8NGG3 340 aa5.74□□□□□ -1.49
HDAC6-210ENST00000441703 MBD3L2Q8NHZ7 208 aaPredicted RBP5.74□□□□□ -1.49
HDAC6-210ENST00000441703 NANPQ8TBE9 248 aa5.74□□□□□ -1.49
HDAC6-210ENST00000441703 SLC5A11Q8WWX8 675 aa5.74□□□□□ -1.49
HDAC6-210ENST00000441703 IGFBPL1Q8WX77 278 aa5.74□□□□□ -1.49
HDAC6-210ENST00000441703 TM4SF19Q96DZ7 209 aa5.74□□□□□ -1.49
HDAC6-210ENST00000441703 RNFT2Q96EX2 444 aa5.74□□□□□ -1.49
HDAC6-210ENST00000441703 ZFP3Q96NJ6 502 aa5.74□□□□□ -1.49
HDAC6-210ENST00000441703 MNTQ99583 582 aa5.74□□□□□ -1.49
HDAC6-210ENST00000441703 EGFL8Q99944 293 aa5.74□□□□□ -1.49
HDAC6-210ENST00000441703 BHLHE41Q9C0J9 482 aaPredicted RBP5.74□□□□□ -1.49
HDAC6-210ENST00000441703 ZNF703Q9H7S9 590 aaPredicted RBP5.74□□□□□ -1.49
HDAC6-210ENST00000441703 TCF7L1Q9HCS4 588 aa5.74□□□□□ -1.49
HDAC6-210ENST00000441703 EXOSC3Q9NQT5 275 aaKnown RBP5.74□□□□□ -1.49
HDAC6-210ENST00000441703 SDHAF3Q9NRP4 125 aa5.74□□□□□ -1.49
HDAC6-210ENST00000441703 PPP1R14DQ9NXH3 145 aa5.74□□□□□ -1.49
HDAC6-210ENST00000441703 RASL12Q9NYN1 266 aa5.74□□□□□ -1.49
HDAC6-210ENST00000441703 TVP23BQ9NYZ1 205 aa5.74□□□□□ -1.49
HDAC6-210ENST00000441703 ABRACLQ9P1F3 81 aa5.74□□□□□ -1.49
HDAC6-210ENST00000441703 ZNF223Q9UK11 482 aaPredicted RBP5.74□□□□□ -1.49
HDAC6-210ENST00000441703 CARHSP1Q9Y2V2 147 aaKnown RBP5.74□□□□□ -1.49
HDAC6-210ENST00000441703 MED12Q93074 2177 aa5.74□□□□□ -1.49
HDAC6-210ENST00000441703 FREM1Q5H8C1 2179 aa5.73□□□□□ -1.49
HDAC6-210ENST00000441703 A0A0D9SG52 128 aa5.73□□□□□ -1.49
HDAC6-210ENST00000441703 TRBV4-1A0A0J9YWV2 114 aa5.73□□□□□ -1.49
HDAC6-210ENST00000441703 TMEM218A2RU14 115 aa5.73□□□□□ -1.49
HDAC6-210ENST00000441703 ZNF729A6NN14 1252 aaPredicted RBP5.73□□□□□ -1.49
HDAC6-210ENST00000441703 A8MXE2 369 aa5.73□□□□□ -1.49
HDAC6-210ENST00000441703 MCIDASD6RGH6 385 aa5.73□□□□□ -1.49
HDAC6-210ENST00000441703 H7BY64 318 aa5.73□□□□□ -1.49
HDAC6-210ENST00000441703 UBE2CO00762 179 aa5.73□□□□□ -1.49
HDAC6-210ENST00000441703 IMPA2O14732 288 aa5.73□□□□□ -1.49
HDAC6-210ENST00000441703 FFAR1O14842 300 aa5.73□□□□□ -1.49
HDAC6-210ENST00000441703 UGDHO60701 494 aa5.73□□□□□ -1.49
HDAC6-210ENST00000441703 REM1O75628 298 aa5.73□□□□□ -1.49
HDAC6-210ENST00000441703 NCR1O76036 304 aa5.73□□□□□ -1.49
HDAC6-210ENST00000441703 KDM4BO94953 1096 aa5.73□□□□□ -1.49
HDAC6-210ENST00000441703 LRATO95237 230 aa5.73□□□□□ -1.49
HDAC6-210ENST00000441703 SLC16A8O95907 504 aa5.73□□□□□ -1.49
HDAC6-210ENST00000441703 SERPINA3P01011 423 aa5.73□□□□□ -1.49
HDAC6-210ENST00000441703 IGHV2-70P01814 119 aa5.73□□□□□ -1.49
HDAC6-210ENST00000441703 IGHA1P01876 353 aa5.73□□□□□ -1.49
HDAC6-210ENST00000441703 CATP04040 527 aaKnown RBP5.73□□□□□ -1.49
HDAC6-210ENST00000441703 H1F0P07305 194 aaKnown RBP5.73□□□□□ -1.49
HDAC6-210ENST00000441703 FBP1P09467 338 aa5.73□□□□□ -1.49
HDAC6-210ENST00000441703 SLC35G6P0C7Q6 338 aa5.73□□□□□ -1.49
HDAC6-210ENST00000441703 SAGP10523 405 aaPredicted RBP5.73□□□□□ -1.49
HDAC6-210ENST00000441703 RPA2P15927 270 aa5.73□□□□□ -1.49
HDAC6-210ENST00000441703 MGMTP16455 207 aa5.73□□□□□ -1.49
HDAC6-210ENST00000441703 ZNF3P17036 446 aa5.73□□□□□ -1.49
HDAC6-210ENST00000441703 EPORP19235 508 aa5.73□□□□□ -1.49
HDAC6-210ENST00000441703 TNFRSF1BP20333 461 aa5.73□□□□□ -1.49
HDAC6-210ENST00000441703 PAX6P26367 422 aa5.73□□□□□ -1.49
HDAC6-210ENST00000441703 RBMXP38159 391 aaKnown RBP5.73□□□□□ -1.49
HDAC6-210ENST00000441703 CDKN1AP38936 164 aa5.73□□□□□ -1.49
HDAC6-210ENST00000441703 SLC1A3P43003 542 aa5.73□□□□□ -1.49
HDAC6-210ENST00000441703 GDF5P43026 501 aa5.73□□□□□ -1.49
HDAC6-210ENST00000441703 CAPZA2P47755 286 aa5.73□□□□□ -1.49
HDAC6-210ENST00000441703 OR1E2P47887 323 aa5.73□□□□□ -1.49
HDAC6-210ENST00000441703 MTNR1AP48039 350 aa5.73□□□□□ -1.49
HDAC6-210ENST00000441703 AP3S2P59780 193 aa5.73□□□□□ -1.49
HDAC6-210ENST00000441703 EEF1A1P68104 462 aaKnown RBP5.73□□□□□ -1.49
HDAC6-210ENST00000441703 LGALS3BPQ08380 585 aa5.73□□□□□ -1.49
HDAC6-210ENST00000441703 FAM27E3Q08E93 113 aa5.73□□□□□ -1.49
HDAC6-210ENST00000441703 ECH1Q13011 328 aa5.73□□□□□ -1.49
HDAC6-210ENST00000441703 DUSP8Q13202 625 aa5.73□□□□□ -1.49
HDAC6-210ENST00000441703 CPSF6Q16630 551 aaKnown RBP eCLIP5.73□□□□□ -1.49
HDAC6-210ENST00000441703 PAN3Q58A45 887 aaKnown RBP5.73□□□□□ -1.49
HDAC6-210ENST00000441703 BEX5Q5H9J7 111 aa5.73□□□□□ -1.49
HDAC6-210ENST00000441703 SFRP5Q5T4F7 317 aa5.73□□□□□ -1.49
HDAC6-210ENST00000441703 OR2G6Q5TZ20 316 aa5.73□□□□□ -1.49
HDAC6-210ENST00000441703 EEF1A1P5Q5VTE0 462 aa5.73□□□□□ -1.49
HDAC6-210ENST00000441703 LIPJQ5W064 366 aa5.73□□□□□ -1.49
HDAC6-210ENST00000441703 FRG2Q64ET8 278 aa5.73□□□□□ -1.49
HDAC6-210ENST00000441703 OLFML2AQ68BL7 652 aa5.73□□□□□ -1.49
HDAC6-210ENST00000441703 ZNF626Q68DY1 528 aa5.73□□□□□ -1.49
HDAC6-210ENST00000441703 FAM166AQ6J272 317 aa5.73□□□□□ -1.49
HDAC6-210ENST00000441703 ALKAL2Q6UX46 152 aa5.73□□□□□ -1.49
HDAC6-210ENST00000441703 ZNF550Q7Z398 422 aa5.73□□□□□ -1.49
HDAC6-210ENST00000441703 LDLRAD3Q86YD5 345 aa5.73□□□□□ -1.49
HDAC6-210ENST00000441703 NKAIN4Q8IVV8 208 aa5.73□□□□□ -1.49
HDAC6-210ENST00000441703 SPAG16Q8N0X2 631 aa5.73□□□□□ -1.49
HDAC6-210ENST00000441703 C9orf106Q8NAJ2 232 aa5.73□□□□□ -1.49
HDAC6-210ENST00000441703 NFKBIDQ8NI38 313 aa5.73□□□□□ -1.49
HDAC6-210ENST00000441703 ZNF480Q8WV37 535 aa5.73□□□□□ -1.49
HDAC6-210ENST00000441703 GCDHQ92947 438 aaPredicted RBP5.73□□□□□ -1.49
HDAC6-210ENST00000441703 RFKQ969G6 155 aa5.73□□□□□ -1.49
HDAC6-210ENST00000441703 PHYHIPLQ96FC7 376 aa5.73□□□□□ -1.49
HDAC6-210ENST00000441703 C1orf159Q96HA4 380 aa5.73□□□□□ -1.49
HDAC6-210ENST00000441703 LRR1Q96L50 414 aa5.73□□□□□ -1.49
HDAC6-210ENST00000441703 SGCZQ96LD1 299 aa5.73□□□□□ -1.49
HDAC6-210ENST00000441703 JSRP1Q96MG2 331 aaPredicted RBP5.73□□□□□ -1.49
HDAC6-210ENST00000441703 PRAP1Q96NZ9 151 aa5.73□□□□□ -1.49
HDAC6-210ENST00000441703 FRG2BQ96QU4 278 aa5.73□□□□□ -1.49
HDAC6-210ENST00000441703 RASL10BQ96S79 203 aa5.73□□□□□ -1.49
HDAC6-210ENST00000441703 PKP4Q99569 1192 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms