RNA–Protein interactions for RNA: ENST00000441074.3

LTBR-203, Transcript of lymphotoxin beta receptor, humanhuman

TSL 1 (best)

Gene LTBR, Length 2,327 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-203ENST00000441074 SSTP61278 116 aa10.71□□□□□ -0.69
LTBR-203ENST00000441074 PPP1R1AQ13522 171 aa10.71□□□□□ -0.69
LTBR-203ENST00000441074 RBM39Q14498 530 aaKnown RBP10.71□□□□□ -0.69
LTBR-203ENST00000441074 NFATC4Q14934 902 aa10.71□□□□□ -0.69
LTBR-203ENST00000441074 ELOCQ15369 112 aa10.71□□□□□ -0.69
LTBR-203ENST00000441074 SCGB2B2Q4G0G5 96 aa10.71□□□□□ -0.69
LTBR-203ENST00000441074 FAM166AQ6J272 317 aa10.71□□□□□ -0.69
LTBR-203ENST00000441074 JAZF1Q86VZ6 243 aa10.71□□□□□ -0.69
LTBR-203ENST00000441074 SHISA5Q8N114 240 aa10.71□□□□□ -0.69
LTBR-203ENST00000441074 TM4SF19Q96DZ7 209 aa10.71□□□□□ -0.69
LTBR-203ENST00000441074 CPNE2Q96FN4 548 aaPredicted RBP10.71□□□□□ -0.69
LTBR-203ENST00000441074 SLC2A8Q9NY64 477 aa10.71□□□□□ -0.69
LTBR-203ENST00000441074 ASH2LQ9UBL3 628 aa10.71□□□□□ -0.69
LTBR-203ENST00000441074 CSAG2Q9Y5P2 127 aa10.71□□□□□ -0.69
LTBR-203ENST00000441074 ZDBF2Q9HCK1 2354 aa10.71□□□□□ -0.7
LTBR-203ENST00000441074 TRBV23-1A0A0A0MS06 115 aa10.7□□□□□ -0.7
LTBR-203ENST00000441074 DOK2O60496 412 aa10.7□□□□□ -0.7
LTBR-203ENST00000441074 MT-ND4LP03901 98 aa10.7□□□□□ -0.7
LTBR-203ENST00000441074 DCNP07585 359 aaKnown RBP10.7□□□□□ -0.7
LTBR-203ENST00000441074 GUSBP08236 651 aa10.7□□□□□ -0.7
LTBR-203ENST00000441074 PMELP40967 661 aa10.7□□□□□ -0.7
LTBR-203ENST00000441074 STARD6P59095 220 aa10.7□□□□□ -0.7
LTBR-203ENST00000441074 MEF2DQ14814 521 aa10.7□□□□□ -0.7
LTBR-203ENST00000441074 PRRT3Q5FWE3 981 aa10.7□□□□□ -0.7
LTBR-203ENST00000441074 TMEM244Q5VVB8 128 aa10.7□□□□□ -0.7
LTBR-203ENST00000441074 FAHD2BQ6P2I3 314 aaPredicted RBP10.7□□□□□ -0.7
LTBR-203ENST00000441074 LEG1Q6P5S2 330 aa10.7□□□□□ -0.7
LTBR-203ENST00000441074 ULK3Q6PHR2 472 aa10.7□□□□□ -0.7
LTBR-203ENST00000441074 ZNF627Q7L945 461 aa10.7□□□□□ -0.7
LTBR-203ENST00000441074 CDC20BQ86Y33 519 aa10.7□□□□□ -0.7
LTBR-203ENST00000441074 OR51A4Q8NGJ6 313 aa10.7□□□□□ -0.7
LTBR-203ENST00000441074 DCUN1D4Q92564 292 aa10.7□□□□□ -0.7
LTBR-203ENST00000441074 FAHD2AQ96GK7 314 aa10.7□□□□□ -0.7
LTBR-203ENST00000441074 TMEM41AQ96HV5 264 aa10.7□□□□□ -0.7
LTBR-203ENST00000441074 WDR92Q96MX6 357 aa10.7□□□□□ -0.7
LTBR-203ENST00000441074 CLCC1Q96S66 551 aa10.7□□□□□ -0.7
LTBR-203ENST00000441074 COL25A1Q9BXS0 654 aaPredicted RBP10.7□□□□□ -0.7
LTBR-203ENST00000441074 CST11Q9H112 138 aa10.7□□□□□ -0.7
LTBR-203ENST00000441074 CHMP1AQ9HD42 196 aaPredicted RBP10.7□□□□□ -0.7
LTBR-203ENST00000441074 FARSAQ9Y285 508 aaKnown RBP10.7□□□□□ -0.7
LTBR-203ENST00000441074 RPH3AQ9Y2J0 694 aaPredicted RBP10.7□□□□□ -0.7
LTBR-203ENST00000441074 PCDHGA1Q9Y5H4 931 aa10.7□□□□□ -0.7
LTBR-203ENST00000441074 A0A0B4J2A0 478 aa10.7□□□□□ -0.7
LTBR-203ENST00000441074 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.7□□□□□ -0.7
LTBR-203ENST00000441074 TVP23AA6NH52 213 aa10.7□□□□□ -0.7
LTBR-203ENST00000441074 EEF1E1-BLOC1S5C9J1V9 151 aa10.7□□□□□ -0.7
LTBR-203ENST00000441074 KCNAB3O43448 404 aa10.7□□□□□ -0.7
LTBR-203ENST00000441074 SLC34A2O95436 690 aa10.7□□□□□ -0.7
LTBR-203ENST00000441074 IGHV2-5P01817 119 aa10.7□□□□□ -0.7
LTBR-203ENST00000441074 MPZP25189 248 aa10.7□□□□□ -0.7
LTBR-203ENST00000441074 TACR3P29371 465 aa10.7□□□□□ -0.7
LTBR-203ENST00000441074 AVPR2P30518 371 aa10.7□□□□□ -0.7
LTBR-203ENST00000441074 AQP2P41181 271 aa10.7□□□□□ -0.7
LTBR-203ENST00000441074 CDKN2AP42771 156 aaKnown RBP10.7□□□□□ -0.7
LTBR-203ENST00000441074 SLC6A9P48067 706 aa10.7□□□□□ -0.7
LTBR-203ENST00000441074 CSNK1EP49674 416 aaKnown RBP10.7□□□□□ -0.7
LTBR-203ENST00000441074 F2RL1P55085 397 aa10.7□□□□□ -0.7
LTBR-203ENST00000441074 IL13RA1P78552 427 aa10.7□□□□□ -0.7
LTBR-203ENST00000441074 RASGEF1BQ0VAM2 473 aa10.7□□□□□ -0.7
LTBR-203ENST00000441074 RUNX2Q13950 521 aa10.7□□□□□ -0.7
LTBR-203ENST00000441074 KCNAB1Q14722 419 aa10.7□□□□□ -0.7
LTBR-203ENST00000441074 KIR2DS3Q14952 304 aa10.7□□□□□ -0.7
LTBR-203ENST00000441074 OR10K2Q6IF99 312 aa10.7□□□□□ -0.7
LTBR-203ENST00000441074 ZDHHC22Q8N966 263 aa10.7□□□□□ -0.7
LTBR-203ENST00000441074 EXD3Q8N9H8 876 aa10.7□□□□□ -0.7
LTBR-203ENST00000441074 TSTD1Q8NFU3 115 aa10.7□□□□□ -0.7
LTBR-203ENST00000441074 ZCCHC10Q8TBK6 192 aa10.7□□□□□ -0.7
LTBR-203ENST00000441074 TCTEX1D2Q8WW35 142 aa10.7□□□□□ -0.7
LTBR-203ENST00000441074 SCARF2Q96GP6 870 aaPredicted RBP10.7□□□□□ -0.7
LTBR-203ENST00000441074 SLC41A2Q96JW4 573 aa10.7□□□□□ -0.7
LTBR-203ENST00000441074 ZC3H10Q96K80 434 aaKnown RBP10.7□□□□□ -0.7
LTBR-203ENST00000441074 SMIM8Q96KF7 97 aa10.7□□□□□ -0.7
LTBR-203ENST00000441074 CDC6Q99741 560 aa10.7□□□□□ -0.7
LTBR-203ENST00000441074 PRRT1Q99946 306 aa10.7□□□□□ -0.7
LTBR-203ENST00000441074 HRH4Q9H3N8 390 aa10.7□□□□□ -0.7
LTBR-203ENST00000441074 FBRSQ9HAH7 460 aa10.7□□□□□ -0.7
LTBR-203ENST00000441074 PRMT8Q9NR22 394 aaPredicted RBP10.7□□□□□ -0.7
LTBR-203ENST00000441074 DNAJB12Q9NXW2 375 aaKnown RBP10.7□□□□□ -0.7
LTBR-203ENST00000441074 SHPKQ9UHJ6 478 aa10.7□□□□□ -0.7
LTBR-203ENST00000441074 IKZF2Q9UKS7 526 aa10.7□□□□□ -0.7
LTBR-203ENST00000441074 PCOLCE2Q9UKZ9 415 aa10.7□□□□□ -0.7
LTBR-203ENST00000441074 A0A1W2PPE3 182 aa10.69□□□□□ -0.7
LTBR-203ENST00000441074 ZNF729A6NN14 1252 aaPredicted RBP10.69□□□□□ -0.7
LTBR-203ENST00000441074 TXNL1O43396 289 aa10.69□□□□□ -0.7
LTBR-203ENST00000441074 SNRNP200O75643 2136 aaKnown RBP10.69□□□□□ -0.7
LTBR-203ENST00000441074 CD5P06127 495 aa10.69□□□□□ -0.7
LTBR-203ENST00000441074 FBXO45P0C2W1 286 aa10.69□□□□□ -0.7
LTBR-203ENST00000441074 LIPCP11150 499 aa10.69□□□□□ -0.7
LTBR-203ENST00000441074 ZNF28P17035 718 aa10.69□□□□□ -0.7
LTBR-203ENST00000441074 MAOAP21397 527 aa10.69□□□□□ -0.7
LTBR-203ENST00000441074 GABRA3P34903 492 aa10.69□□□□□ -0.7
LTBR-203ENST00000441074 EIF2S3P41091 472 aaKnown RBP10.69□□□□□ -0.7
LTBR-203ENST00000441074 EMDP50402 254 aa10.69□□□□□ -0.7
LTBR-203ENST00000441074 DMWDQ09019 674 aa10.69□□□□□ -0.7
LTBR-203ENST00000441074 NKPD1Q17RQ9 610 aa10.69□□□□□ -0.7
LTBR-203ENST00000441074 DEFB134Q4QY38 66 aa10.69□□□□□ -0.7
LTBR-203ENST00000441074 ACER2Q5QJU3 275 aa10.69□□□□□ -0.7
LTBR-203ENST00000441074 RHOUQ7L0Q8 258 aa10.69□□□□□ -0.7
LTBR-203ENST00000441074 ZAR1Q86SH2 424 aa10.69□□□□□ -0.7
LTBR-203ENST00000441074 PRSS35Q8N3Z0 413 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms