RNA–Protein interactions for RNA: ENST00000439977.6

HERPUD1-204, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERPUD1, Length 2,946 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-204ENST00000439977 FOXQ1Q9C009 403 aa12.13□□□□□ -0.47
HERPUD1-204ENST00000439977 PTGES2Q9H7Z7 377 aa12.13□□□□□ -0.47
HERPUD1-204ENST00000439977 KLK13Q9UKR3 277 aa12.13□□□□□ -0.47
HERPUD1-204ENST00000439977 HHLA2Q9UM44 414 aa12.13□□□□□ -0.47
HERPUD1-204ENST00000439977 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.12□□□□□ -0.47
HERPUD1-204ENST00000439977 TEX51A0A1B0GUA7 166 aa12.12□□□□□ -0.47
HERPUD1-204ENST00000439977 A0A1W2PR77 199 aa12.12□□□□□ -0.47
HERPUD1-204ENST00000439977 ZNF736B4DX44 427 aaPredicted RBP12.12□□□□□ -0.47
HERPUD1-204ENST00000439977 EIF4E2O60573 245 aaKnown RBP12.12□□□□□ -0.47
HERPUD1-204ENST00000439977 FOXK1P85037 733 aa12.12□□□□□ -0.47
HERPUD1-204ENST00000439977 INPP5JQ15735 1006 aaPredicted RBP12.12□□□□□ -0.47
HERPUD1-204ENST00000439977 CDNFQ49AH0 187 aa12.12□□□□□ -0.47
HERPUD1-204ENST00000439977 FAM69BQ5VUD6 431 aa12.12□□□□□ -0.47
HERPUD1-204ENST00000439977 GRINAQ7Z429 371 aa12.12□□□□□ -0.47
HERPUD1-204ENST00000439977 GPAT4Q86UL3 456 aa12.12□□□□□ -0.47
HERPUD1-204ENST00000439977 NUDCD2Q8WVJ2 157 aa12.12□□□□□ -0.47
HERPUD1-204ENST00000439977 SLC7A5P2Q9GIP4 190 aa12.12□□□□□ -0.47
HERPUD1-204ENST00000439977 VSX1Q9NZR4 365 aaPredicted RBP12.12□□□□□ -0.47
HERPUD1-204ENST00000439977 NPIPA5E9PKD4 350 aa12.12□□□□□ -0.47
HERPUD1-204ENST00000439977 FADS1O60427 444 aa12.12□□□□□ -0.47
HERPUD1-204ENST00000439977 SLC2A1P11166 492 aa12.12□□□□□ -0.47
HERPUD1-204ENST00000439977 IGFBP4P22692 258 aa12.12□□□□□ -0.47
HERPUD1-204ENST00000439977 CD27P26842 260 aa12.12□□□□□ -0.47
HERPUD1-204ENST00000439977 SLC26A5P58743 744 aa12.12□□□□□ -0.47
HERPUD1-204ENST00000439977 TAS2R19P59542 299 aa12.12□□□□□ -0.47
HERPUD1-204ENST00000439977 RAB30Q15771 203 aa12.12□□□□□ -0.47
HERPUD1-204ENST00000439977 LY6G6FQ5SQ64 297 aa12.12□□□□□ -0.47
HERPUD1-204ENST00000439977 ZNF660Q6AZW8 331 aaPredicted RBP12.12□□□□□ -0.47
HERPUD1-204ENST00000439977 C3orf33Q6P1S2 294 aa12.12□□□□□ -0.47
HERPUD1-204ENST00000439977 FDX2Q6P4F2 183 aa12.12□□□□□ -0.47
HERPUD1-204ENST00000439977 C12orf45Q8N5I9 185 aaPredicted RBP12.12□□□□□ -0.47
HERPUD1-204ENST00000439977 STEAP2Q8NFT2 490 aa12.12□□□□□ -0.47
HERPUD1-204ENST00000439977 NPIPA1Q9UND3 350 aa12.12□□□□□ -0.47
HERPUD1-204ENST00000439977 PLEKHA6Q9Y2H5 1048 aa12.12□□□□□ -0.47
HERPUD1-204ENST00000439977 IGHV1OR21-1A0A087WYE8 117 aa12.11□□□□□ -0.47
HERPUD1-204ENST00000439977 MFSD2BA6NFX1 497 aa12.11□□□□□ -0.47
HERPUD1-204ENST00000439977 WIPF3A6NGB9 483 aa12.11□□□□□ -0.47
HERPUD1-204ENST00000439977 LMO7DNF2Z398 122 aa12.11□□□□□ -0.47
HERPUD1-204ENST00000439977 TMEM127O75204 238 aa12.11□□□□□ -0.47
HERPUD1-204ENST00000439977 ACTBP60709 375 aa12.11□□□□□ -0.47
HERPUD1-204ENST00000439977 GMFBP60983 142 aa12.11□□□□□ -0.47
HERPUD1-204ENST00000439977 ACTG1P63261 375 aa12.11□□□□□ -0.47
HERPUD1-204ENST00000439977 TAF13Q15543 124 aa12.11□□□□□ -0.47
HERPUD1-204ENST00000439977 ATPAF1Q5TC12 328 aaPredicted RBP12.11□□□□□ -0.47
HERPUD1-204ENST00000439977 RHOUQ7L0Q8 258 aa12.11□□□□□ -0.47
HERPUD1-204ENST00000439977 SYT13Q7L8C5 426 aa12.11□□□□□ -0.47
HERPUD1-204ENST00000439977 PRSS42Q7Z5A4 293 aa12.11□□□□□ -0.47
HERPUD1-204ENST00000439977 ZNF546Q86UE3 836 aa12.11□□□□□ -0.47
HERPUD1-204ENST00000439977 SLC26A10Q8NG04 563 aa12.11□□□□□ -0.47
HERPUD1-204ENST00000439977 OR52N4Q8NGI2 321 aa12.11□□□□□ -0.47
HERPUD1-204ENST00000439977 OR6M1Q8NGM8 313 aa12.11□□□□□ -0.47
HERPUD1-204ENST00000439977 PDCD10Q9BUL8 212 aa12.11□□□□□ -0.47
HERPUD1-204ENST00000439977 TMPRSS13Q9BYE2 586 aa12.11□□□□□ -0.47
HERPUD1-204ENST00000439977 CNTD2Q9H8S5 307 aa12.11□□□□□ -0.47
HERPUD1-204ENST00000439977 C12orf10Q9HB07 376 aa12.11□□□□□ -0.47
HERPUD1-204ENST00000439977 G6PC2Q9NQR9 355 aa12.11□□□□□ -0.47
HERPUD1-204ENST00000439977 FGF21Q9NSA1 209 aa12.11□□□□□ -0.47
HERPUD1-204ENST00000439977 KIF25Q9UIL4 384 aa12.11□□□□□ -0.47
HERPUD1-204ENST00000439977 NOP16Q9Y3C1 178 aaKnown RBP12.11□□□□□ -0.47
HERPUD1-204ENST00000439977 R4GMQ9 66 aa12.11□□□□□ -0.47
HERPUD1-204ENST00000439977 ARID1AO14497 2285 aa12.11□□□□□ -0.47
HERPUD1-204ENST00000439977 TMEM131Q92545 1883 aa12.11□□□□□ -0.47
HERPUD1-204ENST00000439977 TRAV14DV4A0A0A6YYC5 116 aa12.11□□□□□ -0.47
HERPUD1-204ENST00000439977 HLA-AP01891 365 aaKnown RBP12.11□□□□□ -0.47
HERPUD1-204ENST00000439977 ITGB2P05107 769 aa12.11□□□□□ -0.47
HERPUD1-204ENST00000439977 H2BFMP0C1H6 154 aa12.11□□□□□ -0.47
HERPUD1-204ENST00000439977 NUP62P37198 522 aaPredicted RBP12.11□□□□□ -0.47
HERPUD1-204ENST00000439977 PNLIPRP2P54317 469 aa12.11□□□□□ -0.47
HERPUD1-204ENST00000439977 CXADRP78310 365 aa12.11□□□□□ -0.47
HERPUD1-204ENST00000439977 TLE3Q04726 772 aa12.11□□□□□ -0.47
HERPUD1-204ENST00000439977 UBXN2BQ14CS0 331 aa12.11□□□□□ -0.47
HERPUD1-204ENST00000439977 BEST3Q8N1M1 668 aa12.11□□□□□ -0.47
HERPUD1-204ENST00000439977 ZBTB44Q8NCP5 570 aa12.11□□□□□ -0.47
HERPUD1-204ENST00000439977 CASTOR1Q8WTX7 329 aa12.11□□□□□ -0.47
HERPUD1-204ENST00000439977 SOX7Q9BT81 388 aa12.11□□□□□ -0.47
HERPUD1-204ENST00000439977 SLC2A4RGQ9NR83 387 aa12.11□□□□□ -0.47
HERPUD1-204ENST00000439977 METTL12A8MUP2 240 aa12.1□□□□□ -0.47
HERPUD1-204ENST00000439977 CRABP1P29762 137 aa12.1□□□□□ -0.47
HERPUD1-204ENST00000439977 DCAF7P61962 342 aa12.1□□□□□ -0.47
HERPUD1-204ENST00000439977 HNRNPKP61978 463 aaKnown RBP eCLIP12.1□□□□□ -0.478e-13■■■□□ 16.8
HERPUD1-204ENST00000439977 RNF4P78317 190 aa12.1□□□□□ -0.47
HERPUD1-204ENST00000439977 DHRS2Q13268 280 aa12.1□□□□□ -0.47
HERPUD1-204ENST00000439977 GK2Q14410 553 aaPredicted RBP12.1□□□□□ -0.47
HERPUD1-204ENST00000439977 GFOD2Q3B7J2 385 aa12.1□□□□□ -0.47
HERPUD1-204ENST00000439977 ADGRE4PQ86SQ3 457 aa12.1□□□□□ -0.47
HERPUD1-204ENST00000439977 SLC38A9Q8NBW4 561 aa12.1□□□□□ -0.47
HERPUD1-204ENST00000439977 SCARB1Q8WTV0 552 aa12.1□□□□□ -0.47
HERPUD1-204ENST00000439977 POTEKPQ9BYX7 375 aa12.1□□□□□ -0.47
HERPUD1-204ENST00000439977 WDR13Q9H1Z4 485 aa12.1□□□□□ -0.47
HERPUD1-204ENST00000439977 SEC61A2Q9H9S3 476 aa12.1□□□□□ -0.47
HERPUD1-204ENST00000439977 GPR160Q9UJ42 338 aa12.1□□□□□ -0.47
HERPUD1-204ENST00000439977 HMSDA8MTL9 139 aa12.1□□□□□ -0.47
HERPUD1-204ENST00000439977 GNB3P16520 340 aa12.1□□□□□ -0.47
HERPUD1-204ENST00000439977 IGFBP3P17936 291 aaPredicted RBP12.1□□□□□ -0.47
HERPUD1-204ENST00000439977 SCAND1P57086 179 aa12.1□□□□□ -0.47
HERPUD1-204ENST00000439977 CARD17Q5XLA6 110 aa12.1□□□□□ -0.47
HERPUD1-204ENST00000439977 ZNF454Q8N9F8 522 aa12.1□□□□□ -0.47
HERPUD1-204ENST00000439977 OR13C8Q8NGS7 320 aa12.1□□□□□ -0.47
HERPUD1-204ENST00000439977 OR13C9Q8NGT0 318 aa12.1□□□□□ -0.47
HERPUD1-204ENST00000439977 ST7LQ8TDW4 575 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms