RNA–Protein interactions for RNA: ENST00000439724.7

SMAD3-202, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-202ENST00000439724 CLDN12P56749 244 aa10.43□□□□□ -0.74
SMAD3-202ENST00000439724 CLDN20P56880 219 aa10.43□□□□□ -0.74
SMAD3-202ENST00000439724 LSM6P62312 80 aaKnown RBP10.43□□□□□ -0.74
SMAD3-202ENST00000439724 FAM166AQ6J272 317 aa10.43□□□□□ -0.74
SMAD3-202ENST00000439724 PLET1Q6UQ28 207 aa10.43□□□□□ -0.74
SMAD3-202ENST00000439724 ZIC4Q8N9L1 334 aa10.43□□□□□ -0.74
SMAD3-202ENST00000439724 OR13C3Q8NGS6 347 aa10.43□□□□□ -0.74
SMAD3-202ENST00000439724 OR6N1Q8NGY5 312 aa10.43□□□□□ -0.74
SMAD3-202ENST00000439724 SYNPRQ8TBG9 265 aa10.43□□□□□ -0.74
SMAD3-202ENST00000439724 SMIM4Q8WVI0 70 aa10.43□□□□□ -0.74
SMAD3-202ENST00000439724 HAVCR1Q96D42 359 aa10.43□□□□□ -0.74
SMAD3-202ENST00000439724 FER1L6-AS2Q96M78 137 aa10.43□□□□□ -0.74
SMAD3-202ENST00000439724 UTP23Q9BRU9 249 aaKnown RBP10.43□□□□□ -0.74
SMAD3-202ENST00000439724 RNF121Q9H920 327 aa10.43□□□□□ -0.74
SMAD3-202ENST00000439724 CKLFQ9UBR5 152 aa10.43□□□□□ -0.74
SMAD3-202ENST00000439724 FOXD3Q9UJU5 478 aaPredicted RBP10.43□□□□□ -0.74
SMAD3-202ENST00000439724 RCE1Q9Y256 329 aa10.43□□□□□ -0.74
SMAD3-202ENST00000439724 FAM240BA0A1B0GVZ2 78 aa10.43□□□□□ -0.74
SMAD3-202ENST00000439724 MEIOCA2RUB1 952 aa10.43□□□□□ -0.74
SMAD3-202ENST00000439724 MEGF11A6BM72 1044 aa10.43□□□□□ -0.74
SMAD3-202ENST00000439724 H3BSH0 61 aa10.43□□□□□ -0.74
SMAD3-202ENST00000439724 SLC17A2O00624 439 aa10.43□□□□□ -0.74
SMAD3-202ENST00000439724 TFECO14948 347 aaPredicted RBP10.43□□□□□ -0.74
SMAD3-202ENST00000439724 TTRP02766 147 aa10.43□□□□□ -0.74
SMAD3-202ENST00000439724 TRAPPC2P0DI81 140 aa10.43□□□□□ -0.74
SMAD3-202ENST00000439724 TRAPPC2BP0DI82 140 aa10.43□□□□□ -0.74
SMAD3-202ENST00000439724 MSR1P21757 451 aa10.43□□□□□ -0.74
SMAD3-202ENST00000439724 ITGA3P26006 1051 aa10.43□□□□□ -0.74
SMAD3-202ENST00000439724 EIF1AXP47813 144 aaKnown RBP10.43□□□□□ -0.74
SMAD3-202ENST00000439724 GFRA1P56159 465 aa10.43□□□□□ -0.74
SMAD3-202ENST00000439724 TPTEP56180 551 aa10.43□□□□□ -0.74
SMAD3-202ENST00000439724 CARD18P57730 90 aa10.43□□□□□ -0.74
SMAD3-202ENST00000439724 GABREP78334 506 aa10.43□□□□□ -0.74
SMAD3-202ENST00000439724 DGCR2P98153 550 aa10.43□□□□□ -0.74
SMAD3-202ENST00000439724 GPR176Q14439 515 aa10.43□□□□□ -0.74
SMAD3-202ENST00000439724 CARTPTQ16568 116 aa10.43□□□□□ -0.74
SMAD3-202ENST00000439724 SLC36A2Q495M3 483 aa10.43□□□□□ -0.74
SMAD3-202ENST00000439724 WIPI1Q5MNZ9 446 aaPredicted RBP10.43□□□□□ -0.74
SMAD3-202ENST00000439724 PHYHD1Q5SRE7 291 aa10.43□□□□□ -0.74
SMAD3-202ENST00000439724 STPG1Q5TH74 334 aa10.43□□□□□ -0.74
SMAD3-202ENST00000439724 ABLIM2Q6H8Q1 611 aa10.43□□□□□ -0.74
SMAD3-202ENST00000439724 SPINK14Q6IE38 97 aa10.43□□□□□ -0.74
SMAD3-202ENST00000439724 UBE2J2Q8N2K1 259 aa10.43□□□□□ -0.74
SMAD3-202ENST00000439724 OR2M7Q8NG81 312 aa10.43□□□□□ -0.74
SMAD3-202ENST00000439724 OR2V1Q8NHB1 315 aa10.43□□□□□ -0.74
SMAD3-202ENST00000439724 C15orf40Q8WUR7 153 aa10.43□□□□□ -0.74
SMAD3-202ENST00000439724 S100A16Q96FQ6 103 aaKnown RBP10.43□□□□□ -0.74
SMAD3-202ENST00000439724 PBOV1Q9GZY1 135 aa10.43□□□□□ -0.74
SMAD3-202ENST00000439724 NELFAQ9H3P2 528 aa10.43□□□□□ -0.74
SMAD3-202ENST00000439724 PLEKHA1Q9HB21 404 aa10.43□□□□□ -0.74
SMAD3-202ENST00000439724 PNRC2Q9NPJ4 139 aaKnown RBP10.43□□□□□ -0.74
SMAD3-202ENST00000439724 TAS2R4Q9NYW5 299 aa10.43□□□□□ -0.74
SMAD3-202ENST00000439724 NUFIP1Q9UHK0 495 aaKnown RBP10.43□□□□□ -0.74
SMAD3-202ENST00000439724 CACNG2Q9Y698 323 aa10.43□□□□□ -0.74
SMAD3-202ENST00000439724 ZNF716A6NP11 495 aa10.42□□□□□ -0.74
SMAD3-202ENST00000439724 H0YC42 278 aa10.42□□□□□ -0.74
SMAD3-202ENST00000439724 DHHO43323 396 aa10.42□□□□□ -0.74
SMAD3-202ENST00000439724 TRAPPC6AO75865 159 aa10.42□□□□□ -0.74
SMAD3-202ENST00000439724 ACSM4P0C7M7 580 aa10.42□□□□□ -0.74
SMAD3-202ENST00000439724 FTH1P19P0C7X4 201 aa10.42□□□□□ -0.74
SMAD3-202ENST00000439724 POU3F2P20265 443 aaPredicted RBP10.42□□□□□ -0.74
SMAD3-202ENST00000439724 SLC6A1P30531 599 aa10.42□□□□□ -0.74
SMAD3-202ENST00000439724 MRPS10P82664 201 aaKnown RBP10.42□□□□□ -0.74
SMAD3-202ENST00000439724 OR1C1Q15619 314 aa10.42□□□□□ -0.74
SMAD3-202ENST00000439724 RAB11BQ15907 218 aa10.42□□□□□ -0.74
SMAD3-202ENST00000439724 GLT8D1Q68CQ7 371 aa10.42□□□□□ -0.74
SMAD3-202ENST00000439724 DTX1Q86Y01 620 aa10.42□□□□□ -0.74
SMAD3-202ENST00000439724 C20orf196Q8IYI0 205 aa10.42□□□□□ -0.74
SMAD3-202ENST00000439724 IL22RA1Q8N6P7 574 aa10.42□□□□□ -0.74
SMAD3-202ENST00000439724 DEFB124Q8NES8 71 aa10.42□□□□□ -0.74
SMAD3-202ENST00000439724 ZFP3Q96NJ6 502 aa10.42□□□□□ -0.74
SMAD3-202ENST00000439724 SIGLEC12Q96PQ1 595 aa10.42□□□□□ -0.74
SMAD3-202ENST00000439724 C7orf50Q9BRJ6 194 aaKnown RBP10.42□□□□□ -0.74
SMAD3-202ENST00000439724 MARVELD1Q9BSK0 173 aa10.42□□□□□ -0.74
SMAD3-202ENST00000439724 ZNF703Q9H7S9 590 aaPredicted RBP10.42□□□□□ -0.74
SMAD3-202ENST00000439724 SLC17A5Q9NRA2 495 aa10.42□□□□□ -0.74
SMAD3-202ENST00000439724 DDX28Q9NUL7 540 aaKnown RBP10.42□□□□□ -0.74
SMAD3-202ENST00000439724 NLKQ9UBE8 527 aa10.42□□□□□ -0.74
SMAD3-202ENST00000439724 ASH2LQ9UBL3 628 aa10.42□□□□□ -0.74
SMAD3-202ENST00000439724 B4GALT7Q9UBV7 327 aa10.42□□□□□ -0.74
SMAD3-202ENST00000439724 MRPS7Q9Y2R9 242 aaKnown RBP10.42□□□□□ -0.74
SMAD3-202ENST00000439724 FLVCR1Q9Y5Y0 555 aa10.42□□□□□ -0.74
SMAD3-202ENST00000439724 AHCTF1Q8WYP5 2266 aa10.41□□□□□ -0.74
SMAD3-202ENST00000439724 KNTC1P50748 2209 aa10.41□□□□□ -0.74
SMAD3-202ENST00000439724 PRR33A8MZF0 331 aa10.41□□□□□ -0.74
SMAD3-202ENST00000439724 GABARAPH6UMI1 98 aa10.41□□□□□ -0.74
SMAD3-202ENST00000439724 P2RY10O00398 339 aa10.41□□□□□ -0.74
SMAD3-202ENST00000439724 CXCL13O43927 109 aa10.41□□□□□ -0.74
SMAD3-202ENST00000439724 WDPCPO95876 746 aa10.41□□□□□ -0.74
SMAD3-202ENST00000439724 F10P00742 488 aa10.41□□□□□ -0.74
SMAD3-202ENST00000439724 HPNP05981 417 aa10.41□□□□□ -0.74
SMAD3-202ENST00000439724 ITGA5P08648 1049 aa10.41□□□□□ -0.74
SMAD3-202ENST00000439724 CD3GP09693 182 aa10.41□□□□□ -0.74
SMAD3-202ENST00000439724 CTSSP25774 331 aa10.41□□□□□ -0.74
SMAD3-202ENST00000439724 HSD11B1P28845 292 aa10.41□□□□□ -0.74
SMAD3-202ENST00000439724 GUCA1AP43080 201 aaPredicted RBP10.41□□□□□ -0.74
SMAD3-202ENST00000439724 PTH2RP49190 550 aa10.41□□□□□ -0.74
SMAD3-202ENST00000439724 EIF2B2P49770 351 aaKnown RBP10.41□□□□□ -0.74
SMAD3-202ENST00000439724 SELENOPP49908 381 aa10.41□□□□□ -0.74
SMAD3-202ENST00000439724 GRB2P62993 217 aaKnown RBP10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms