RNA–Protein interactions for RNA: ENST00000439681.1

UBR3-205, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 2

Gene UBR3, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-205ENST00000439681 VASH1Q7L8A9 365 aaPredicted RBP6.52□□□□□ -1.37
UBR3-205ENST00000439681 DPPA2Q7Z7J5 298 aa6.52□□□□□ -1.37
UBR3-205ENST00000439681 MDP1Q86V88 176 aa6.52□□□□□ -1.37
UBR3-205ENST00000439681 P2RY8Q86VZ1 359 aa6.52□□□□□ -1.37
UBR3-205ENST00000439681 ZNF584Q8IVC4 421 aa6.52□□□□□ -1.37
UBR3-205ENST00000439681 AKR7LQ8NHP1 331 aa6.52□□□□□ -1.37
UBR3-205ENST00000439681 OR8B4Q96RC9 309 aa6.52□□□□□ -1.37
UBR3-205ENST00000439681 ALG8Q9BVK2 526 aa6.52□□□□□ -1.37
UBR3-205ENST00000439681 ACTR6Q9GZN1 396 aa6.52□□□□□ -1.37
UBR3-205ENST00000439681 OR10A4Q9H209 315 aa6.52□□□□□ -1.37
UBR3-205ENST00000439681 KCNN2Q9H2S1 579 aa6.52□□□□□ -1.37
UBR3-205ENST00000439681 RNF121Q9H920 327 aa6.52□□□□□ -1.37
UBR3-205ENST00000439681 LSM2Q9Y333 95 aaKnown RBP6.52□□□□□ -1.37
UBR3-205ENST00000439681 A0A087WXM4 84 aa6.51□□□□□ -1.37
UBR3-205ENST00000439681 TMEM129A0AVI4 362 aa6.51□□□□□ -1.37
UBR3-205ENST00000439681 OR6C6A6NF89 314 aa6.51□□□□□ -1.37
UBR3-205ENST00000439681 METTL15A6NJ78 407 aa6.51□□□□□ -1.37
UBR3-205ENST00000439681 POM121CA8CG34 1229 aa6.51□□□□□ -1.37
UBR3-205ENST00000439681 PHYHO14832 338 aa6.51□□□□□ -1.37
UBR3-205ENST00000439681 SGCEO43556 437 aa6.51□□□□□ -1.37
UBR3-205ENST00000439681 UBL3O95164 117 aa6.51□□□□□ -1.37
UBR3-205ENST00000439681 CLDN14O95500 239 aa6.51□□□□□ -1.37
UBR3-205ENST00000439681 PTHP01270 115 aa6.51□□□□□ -1.37
UBR3-205ENST00000439681 THBDP07204 575 aa6.51□□□□□ -1.37
UBR3-205ENST00000439681 PLA2G2AP14555 144 aa6.51□□□□□ -1.37
UBR3-205ENST00000439681 CBR1P16152 277 aa6.51□□□□□ -1.37
UBR3-205ENST00000439681 MYL12AP19105 171 aa6.51□□□□□ -1.37
UBR3-205ENST00000439681 CAPZA2P47755 286 aa6.51□□□□□ -1.37
UBR3-205ENST00000439681 UBE2NP61088 152 aaKnown RBP6.51□□□□□ -1.37
UBR3-205ENST00000439681 SCRN3Q0VDG4 424 aa6.51□□□□□ -1.37
UBR3-205ENST00000439681 TAB1Q15750 504 aa6.51□□□□□ -1.37
UBR3-205ENST00000439681 GSG1Q2KHT4 349 aa6.51□□□□□ -1.37
UBR3-205ENST00000439681 TP53I3Q53FA7 332 aa6.51□□□□□ -1.37
UBR3-205ENST00000439681 ELFN2Q5R3F8 820 aa6.51□□□□□ -1.37
UBR3-205ENST00000439681 XAF1Q6GPH4 301 aa6.51□□□□□ -1.37
UBR3-205ENST00000439681 TMEM53Q6P2H8 277 aa6.51□□□□□ -1.37
UBR3-205ENST00000439681 DEGS2Q6QHC5 323 aa6.51□□□□□ -1.37
UBR3-205ENST00000439681 SEZ6L2Q6UXD5 910 aa6.51□□□□□ -1.37
UBR3-205ENST00000439681 LRRN1Q6UXK5 716 aa6.51□□□□□ -1.37
UBR3-205ENST00000439681 RHOUQ7L0Q8 258 aa6.51□□□□□ -1.37
UBR3-205ENST00000439681 ZNF679Q8IYX0 411 aa6.51□□□□□ -1.37
UBR3-205ENST00000439681 OR52N1Q8NH53 320 aa6.51□□□□□ -1.37
UBR3-205ENST00000439681 OR1F12Q8NHA8 337 aa6.51□□□□□ -1.37
UBR3-205ENST00000439681 SNX33Q8WV41 574 aa6.51□□□□□ -1.37
UBR3-205ENST00000439681 GATAD2BQ8WXI9 593 aa6.51□□□□□ -1.37
UBR3-205ENST00000439681 OR5M11Q96RB7 305 aa6.51□□□□□ -1.37
UBR3-205ENST00000439681 C1QTNF6Q9BXI9 259 aa6.51□□□□□ -1.37
UBR3-205ENST00000439681 ELOVL3Q9HB03 270 aa6.51□□□□□ -1.37
UBR3-205ENST00000439681 OBP2BQ9NPH6 170 aa6.51□□□□□ -1.37
UBR3-205ENST00000439681 ACOT13Q9NPJ3 140 aa6.51□□□□□ -1.37
UBR3-205ENST00000439681 CENPMQ9NSP4 180 aa6.51□□□□□ -1.37
UBR3-205ENST00000439681 DDX28Q9NUL7 540 aaKnown RBP6.51□□□□□ -1.37
UBR3-205ENST00000439681 ERGIC3Q9Y282 383 aa6.51□□□□□ -1.37
UBR3-205ENST00000439681 AMDHD2Q9Y303 409 aa6.51□□□□□ -1.37
UBR3-205ENST00000439681 CAB39Q9Y376 341 aaPredicted RBP6.51□□□□□ -1.37
UBR3-205ENST00000439681 FAM208BQ5VWN6 2430 aa6.51□□□□□ -1.37
UBR3-205ENST00000439681 PHF3Q92576 2039 aaKnown RBP6.51□□□□□ -1.37
UBR3-205ENST00000439681 LOC100509620A0A075B734 347 aa6.51□□□□□ -1.37
UBR3-205ENST00000439681 E9PI62 339 aa6.51□□□□□ -1.37
UBR3-205ENST00000439681 J3QLW9 94 aa6.51□□□□□ -1.37
UBR3-205ENST00000439681 SULT1C4O75897 302 aa6.51□□□□□ -1.37
UBR3-205ENST00000439681 LALBAP00709 142 aa6.51□□□□□ -1.37
UBR3-205ENST00000439681 ZNF14P17017 642 aaPredicted RBP6.51□□□□□ -1.37
UBR3-205ENST00000439681 ZNF19P17023 458 aa6.51□□□□□ -1.37
UBR3-205ENST00000439681 CRYGSP22914 178 aa6.51□□□□□ -1.37
UBR3-205ENST00000439681 RAB39AQ14964 217 aa6.51□□□□□ -1.37
UBR3-205ENST00000439681 RAB35Q15286 201 aa6.51□□□□□ -1.37
UBR3-205ENST00000439681 KCTD18Q6PI47 426 aaPredicted RBP6.51□□□□□ -1.37
UBR3-205ENST00000439681 KCTD8Q6ZWB6 473 aa6.51□□□□□ -1.37
UBR3-205ENST00000439681 KCTD20Q7Z5Y7 419 aa6.51□□□□□ -1.37
UBR3-205ENST00000439681 MYPOPQ86VE0 399 aaPredicted RBP6.51□□□□□ -1.37
UBR3-205ENST00000439681 EGFL6Q8IUX8 553 aa6.51□□□□□ -1.37
UBR3-205ENST00000439681 SYS1Q8N2H4 156 aa6.51□□□□□ -1.37
UBR3-205ENST00000439681 KLHL36Q8N4N3 616 aa6.51□□□□□ -1.37
UBR3-205ENST00000439681 FAM169BQ8N8A8 192 aa6.51□□□□□ -1.37
UBR3-205ENST00000439681 SPRYD4Q8WW59 207 aaPredicted RBP6.51□□□□□ -1.37
UBR3-205ENST00000439681 NANOS1Q8WY41 292 aaKnown RBP6.51□□□□□ -1.37
UBR3-205ENST00000439681 HSD17B8Q92506 261 aa6.51□□□□□ -1.37
UBR3-205ENST00000439681 SLC7A6Q92536 515 aa6.51□□□□□ -1.37
UBR3-205ENST00000439681 PELI1Q96FA3 418 aa6.51□□□□□ -1.37
UBR3-205ENST00000439681 MS4A3Q96HJ5 214 aa6.51□□□□□ -1.37
UBR3-205ENST00000439681 C4orf36Q96KX1 117 aa6.51□□□□□ -1.37
UBR3-205ENST00000439681 WFIKKN1Q96NZ8 548 aa6.51□□□□□ -1.37
UBR3-205ENST00000439681 USB1Q9BQ65 265 aaKnown RBP6.51□□□□□ -1.37
UBR3-205ENST00000439681 NPDC1Q9NQX5 325 aaPredicted RBP6.51□□□□□ -1.37
UBR3-205ENST00000439681 CHCHD3Q9NX63 227 aaKnown RBP6.51□□□□□ -1.37
UBR3-205ENST00000439681 BABAM2Q9NXR7 383 aa6.51□□□□□ -1.37
UBR3-205ENST00000439681 PLEK2Q9NYT0 353 aa6.51□□□□□ -1.37
UBR3-205ENST00000439681 CRNNQ9UBG3 495 aaPredicted RBP6.51□□□□□ -1.37
UBR3-205ENST00000439681 FBXL3Q9UKT7 428 aa6.51□□□□□ -1.37
UBR3-205ENST00000439681 LRP12Q9Y561 859 aa6.51□□□□□ -1.37
UBR3-205ENST00000439681 SNX5Q9Y5X3 404 aa6.51□□□□□ -1.37
UBR3-205ENST00000439681 FREM1Q5H8C1 2179 aa6.51□□□□□ -1.37
UBR3-205ENST00000439681 ARHGAP21Q5T5U3 1957 aa6.5□□□□□ -1.37
UBR3-205ENST00000439681 CLEC18AA5D8T8 446 aa6.5□□□□□ -1.37
UBR3-205ENST00000439681 ZNF878C9JN71 531 aa6.5□□□□□ -1.37
UBR3-205ENST00000439681 DOK2O60496 412 aa6.5□□□□□ -1.37
UBR3-205ENST00000439681 ZNF254O75437 659 aa6.5□□□□□ -1.37
UBR3-205ENST00000439681 SRSF10O75494 262 aaKnown RBP6.5□□□□□ -1.37
UBR3-205ENST00000439681 IGKV3-15P01624 115 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms