RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 C9orf170A2RU37 121 aa8.17□□□□□ -1.1
COPB1-202ENST00000439561 EFCAB7A8K855 629 aa8.17□□□□□ -1.1
COPB1-202ENST00000439561 SDCBPO00560 298 aaPredicted RBP8.17□□□□□ -1.1
COPB1-202ENST00000439561 EIF3GO75821 320 aaKnown RBP eCLIP8.17□□□□□ -1.1
COPB1-202ENST00000439561 NKX2-2O95096 273 aa8.17□□□□□ -1.1
COPB1-202ENST00000439561 MPZL1O95297 269 aa8.17□□□□□ -1.1
COPB1-202ENST00000439561 TSPAN15O95858 294 aa8.17□□□□□ -1.1
COPB1-202ENST00000439561 SFTA3P0C7M3 94 aa8.17□□□□□ -1.1
COPB1-202ENST00000439561 SLC35E2P0CK97 266 aa8.17□□□□□ -1.1
COPB1-202ENST00000439561 PNMTP11086 282 aa8.17□□□□□ -1.1
COPB1-202ENST00000439561 ST6GAL1P15907 406 aa8.17□□□□□ -1.1
COPB1-202ENST00000439561 NQO2P16083 231 aa8.17□□□□□ -1.1
COPB1-202ENST00000439561 AMY2BP19961 511 aa8.17□□□□□ -1.1
COPB1-202ENST00000439561 KIR3DL2P43630 455 aa8.17□□□□□ -1.1
COPB1-202ENST00000439561 ADPRHP54922 357 aa8.17□□□□□ -1.1
COPB1-202ENST00000439561 IKZF1Q13422 519 aa8.17□□□□□ -1.1
COPB1-202ENST00000439561 ZNF74Q16587 644 aa8.17□□□□□ -1.1
COPB1-202ENST00000439561 UQCC3Q6UW78 93 aa8.17□□□□□ -1.1
COPB1-202ENST00000439561 ETV3LQ6ZN32 361 aa8.17□□□□□ -1.1
COPB1-202ENST00000439561 TTLL10Q6ZVT0 673 aa8.17□□□□□ -1.1
COPB1-202ENST00000439561 CA13Q8N1Q1 262 aa8.17□□□□□ -1.1
COPB1-202ENST00000439561 BCORP1Q8N888 145 aa8.17□□□□□ -1.1
COPB1-202ENST00000439561 OR5D18Q8NGL1 313 aa8.17□□□□□ -1.1
COPB1-202ENST00000439561 GPX8Q8TED1 209 aa8.17□□□□□ -1.1
COPB1-202ENST00000439561 OR10A5Q9H207 317 aa8.17□□□□□ -1.1
COPB1-202ENST00000439561 ZNF701Q9NV72 531 aaPredicted RBP8.17□□□□□ -1.1
COPB1-202ENST00000439561 GIMD1P0DJR0 217 aa8.16□□□□□ -1.1
COPB1-202ENST00000439561 GLI4P10075 376 aa8.16□□□□□ -1.1
COPB1-202ENST00000439561 GJA4P35212 333 aa8.16□□□□□ -1.1
COPB1-202ENST00000439561 EMP2P54851 167 aa8.16□□□□□ -1.1
COPB1-202ENST00000439561 FABP9Q0Z7S8 132 aa8.16□□□□□ -1.1
COPB1-202ENST00000439561 GGTLC2Q14390 218 aa8.16□□□□□ -1.1
COPB1-202ENST00000439561 SLC17A1Q14916 467 aa8.16□□□□□ -1.1
COPB1-202ENST00000439561 SGCAQ16586 387 aa8.16□□□□□ -1.1
COPB1-202ENST00000439561 MESTQ5EB52 335 aa8.16□□□□□ -1.1
COPB1-202ENST00000439561 TMPPEQ6ZT21 453 aa8.16□□□□□ -1.1
COPB1-202ENST00000439561 ZNF679Q8IYX0 411 aa8.16□□□□□ -1.1
COPB1-202ENST00000439561 AVL9Q8NBF6 648 aa8.16□□□□□ -1.1
COPB1-202ENST00000439561 HHIPL1Q96JK4 782 aa8.16□□□□□ -1.1
COPB1-202ENST00000439561 WDR92Q96MX6 357 aa8.16□□□□□ -1.1
COPB1-202ENST00000439561 TSPAN32Q96QS1 320 aa8.16□□□□□ -1.1
COPB1-202ENST00000439561 BANF2Q9H503 90 aa8.16□□□□□ -1.1
COPB1-202ENST00000439561 SMCO4Q9NRQ5 59 aa8.16□□□□□ -1.1
COPB1-202ENST00000439561 ICAM5Q9UMF0 924 aa8.16□□□□□ -1.1
COPB1-202ENST00000439561 MKI67P46013 3256 aaKnown RBP8.16□□□□□ -1.1
COPB1-202ENST00000439561 A0A0A6YYH2 397 aa8.16□□□□□ -1.1
COPB1-202ENST00000439561 RNF222A6NCQ9 220 aa8.16□□□□□ -1.1
COPB1-202ENST00000439561 A6NJ64 397 aa8.16□□□□□ -1.1
COPB1-202ENST00000439561 METTL12A8MUP2 240 aa8.16□□□□□ -1.1
COPB1-202ENST00000439561 GPR89AB7ZAQ6 455 aa8.16□□□□□ -1.1
COPB1-202ENST00000439561 LILRB3O75022 631 aa8.16□□□□□ -1.1
COPB1-202ENST00000439561 ADH1BP00325 375 aa8.16□□□□□ -1.1
COPB1-202ENST00000439561 PNPP00491 289 aa8.16□□□□□ -1.1
COPB1-202ENST00000439561 ITGB2P05107 769 aa8.16□□□□□ -1.1
COPB1-202ENST00000439561 GPR89BP0CG08 455 aa8.16□□□□□ -1.1
COPB1-202ENST00000439561 SLC2A1P11166 492 aa8.16□□□□□ -1.1
COPB1-202ENST00000439561 ADH6P28332 368 aa8.16□□□□□ -1.1
COPB1-202ENST00000439561 CALCRP30988 508 aa8.16□□□□□ -1.1
COPB1-202ENST00000439561 EIF5AP63241 154 aaKnown RBP8.16□□□□□ -1.1
COPB1-202ENST00000439561 MFGE8Q08431 387 aaPredicted RBP8.16□□□□□ -1.1
COPB1-202ENST00000439561 RUNX3Q13761 415 aa8.16□□□□□ -1.1
COPB1-202ENST00000439561 CD226Q15762 336 aa8.16□□□□□ -1.1
COPB1-202ENST00000439561 SPRED2Q7Z698 418 aa8.16□□□□□ -1.1
COPB1-202ENST00000439561 EIF4E3Q8N5X7 224 aaKnown RBP8.16□□□□□ -1.1
COPB1-202ENST00000439561 OR5AP2Q8NGF4 316 aa8.16□□□□□ -1.1
COPB1-202ENST00000439561 SLC22A8Q8TCC7 542 aa8.16□□□□□ -1.1
COPB1-202ENST00000439561 GLYATL2Q8WU03 294 aa8.16□□□□□ -1.1
COPB1-202ENST00000439561 THRSPQ92748 146 aa8.16□□□□□ -1.1
COPB1-202ENST00000439561 S100A13Q99584 98 aa8.16□□□□□ -1.1
COPB1-202ENST00000439561 LMF2Q9BU23 707 aaKnown RBP8.16□□□□□ -1.1
COPB1-202ENST00000439561 MMP25Q9NPA2 562 aa8.16□□□□□ -1.1
COPB1-202ENST00000439561 DHCR7Q9UBM7 475 aaKnown RBP8.16□□□□□ -1.1
COPB1-202ENST00000439561 KLK13Q9UKR3 277 aa8.16□□□□□ -1.1
COPB1-202ENST00000439561 COA3Q9Y2R0 106 aaPredicted RBP8.16□□□□□ -1.1
COPB1-202ENST00000439561 MRPS18BQ9Y676 258 aaKnown RBP8.16□□□□□ -1.1
COPB1-202ENST00000439561 SCN5AQ14524 2016 aa8.16□□□□□ -1.1
COPB1-202ENST00000439561 C17orf105B2RV13 164 aa8.16□□□□□ -1.1
COPB1-202ENST00000439561 SULT2B1O00204 365 aa8.16□□□□□ -1.1
COPB1-202ENST00000439561 PHYHO14832 338 aa8.16□□□□□ -1.1
COPB1-202ENST00000439561 ZNF264O43296 627 aa8.16□□□□□ -1.1
COPB1-202ENST00000439561 OIP5O43482 229 aa8.16□□□□□ -1.1
COPB1-202ENST00000439561 SYT7O43581 403 aa8.16□□□□□ -1.1
COPB1-202ENST00000439561 EFEMP2O95967 443 aa8.16□□□□□ -1.1
COPB1-202ENST00000439561 OPN1LWP04000 364 aa8.16□□□□□ -1.1
COPB1-202ENST00000439561 GP1BBP13224 206 aa8.16□□□□□ -1.1
COPB1-202ENST00000439561 ID4P47928 161 aa8.16□□□□□ -1.1
COPB1-202ENST00000439561 CYCSP99999 105 aaKnown RBP8.16□□□□□ -1.1
COPB1-202ENST00000439561 PJVKQ0ZLH3 352 aa8.16□□□□□ -1.1
COPB1-202ENST00000439561 ACKR1Q16570 336 aa8.16□□□□□ -1.1
COPB1-202ENST00000439561 CHRDL2Q6WN34 429 aa8.16□□□□□ -1.1
COPB1-202ENST00000439561 OTOSQ8NHW6 89 aa8.16□□□□□ -1.1
COPB1-202ENST00000439561 FAM71F1Q96KD3 344 aaPredicted RBP8.16□□□□□ -1.1
COPB1-202ENST00000439561 LRFN5Q96NI6 719 aa8.16□□□□□ -1.1
COPB1-202ENST00000439561 LYRM4Q9HD34 91 aa8.16□□□□□ -1.1
COPB1-202ENST00000439561 MEGF11A6BM72 1044 aa8.15□□□□□ -1.1
COPB1-202ENST00000439561 C17orf51A8MQB3 221 aa8.15□□□□□ -1.1
COPB1-202ENST00000439561 RNASEK-C17orf49H0YIS7 233 aa8.15□□□□□ -1.1
COPB1-202ENST00000439561 NME2P1O60361 137 aa8.15□□□□□ -1.1
COPB1-202ENST00000439561 LMX1BO60663 402 aa8.15□□□□□ -1.1
COPB1-202ENST00000439561 RPS4Y1P22090 263 aaKnown RBP8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms