RNA–Protein interactions for RNA: ENST00000439235.5

CHD3-204, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-204ENST00000439235 DOK2O60496 412 aa18.09■□□□□ 0.49
CHD3-204ENST00000439235 ZNF254O75437 659 aa18.09■□□□□ 0.49
CHD3-204ENST00000439235 HLA-HP01893 362 aa18.09■□□□□ 0.49
CHD3-204ENST00000439235 TACSTD2P09758 323 aa18.09■□□□□ 0.49
CHD3-204ENST00000439235 H2BFMP0C1H6 154 aa18.09■□□□□ 0.49
CHD3-204ENST00000439235 PCMT1P22061 227 aa18.09■□□□□ 0.49
CHD3-204ENST00000439235 GSG1Q2KHT4 349 aa18.09■□□□□ 0.49
CHD3-204ENST00000439235 FBXL19-AS1Q494R0 122 aa18.09■□□□□ 0.49
CHD3-204ENST00000439235 ELFN2Q5R3F8 820 aa18.09■□□□□ 0.49
CHD3-204ENST00000439235 OR2G6Q5TZ20 316 aa18.09■□□□□ 0.49
CHD3-204ENST00000439235 P2RY8Q86VZ1 359 aa18.09■□□□□ 0.49
CHD3-204ENST00000439235 ZNF679Q8IYX0 411 aa18.09■□□□□ 0.49
CHD3-204ENST00000439235 HAVCR2Q8TDQ0 301 aa18.09■□□□□ 0.49
CHD3-204ENST00000439235 SPRYD4Q8WW59 207 aaPredicted RBP18.09■□□□□ 0.49
CHD3-204ENST00000439235 OR10A4Q9H209 315 aa18.09■□□□□ 0.49
CHD3-204ENST00000439235 MOV10Q9HCE1 1003 aaKnown RBP18.09■□□□□ 0.49
CHD3-204ENST00000439235 SLCO1C1Q9NYB5 712 aa18.09■□□□□ 0.49
CHD3-204ENST00000439235 GNG8Q9UK08 70 aa18.09■□□□□ 0.49
CHD3-204ENST00000439235 PRR32B1ATL7 298 aa18.08■□□□□ 0.48
CHD3-204ENST00000439235 C16orf97H3BN30 126 aa18.08■□□□□ 0.48
CHD3-204ENST00000439235 J3QLW9 94 aa18.08■□□□□ 0.48
CHD3-204ENST00000439235 WNT11O96014 354 aa18.08■□□□□ 0.48
CHD3-204ENST00000439235 PATE4P0C8F1 98 aa18.08■□□□□ 0.48
CHD3-204ENST00000439235 ZNF19P17023 458 aa18.08■□□□□ 0.48
CHD3-204ENST00000439235 AGAP20933 346 aa18.08■□□□□ 0.48
CHD3-204ENST00000439235 PAX7P23759 505 aa18.08■□□□□ 0.48
CHD3-204ENST00000439235 OPRL1P41146 370 aa18.08■□□□□ 0.48
CHD3-204ENST00000439235 RIDAP52758 137 aaKnown RBP18.08■□□□□ 0.48
CHD3-204ENST00000439235 GRB2P62993 217 aaKnown RBP18.08■□□□□ 0.48
CHD3-204ENST00000439235 PLP2Q04941 152 aa18.08■□□□□ 0.48
CHD3-204ENST00000439235 ECH1Q13011 328 aa18.08■□□□□ 0.48
CHD3-204ENST00000439235 MRPL28Q13084 256 aaKnown RBP18.08■□□□□ 0.48
CHD3-204ENST00000439235 SPHARQ15513 63 aa18.08■□□□□ 0.48
CHD3-204ENST00000439235 MED22Q15528 200 aa18.08■□□□□ 0.48
CHD3-204ENST00000439235 TAF13Q15543 124 aa18.08■□□□□ 0.48
CHD3-204ENST00000439235 NEDD8Q15843 81 aa18.08■□□□□ 0.48
CHD3-204ENST00000439235 TP53I3Q53FA7 332 aa18.08■□□□□ 0.48
CHD3-204ENST00000439235 CCDC92Q53HC0 331 aaPredicted RBP18.08■□□□□ 0.48
CHD3-204ENST00000439235 ZNF684Q5T5D7 378 aa18.08■□□□□ 0.48
CHD3-204ENST00000439235 UBE2UQ5VVX9 321 aa18.08■□□□□ 0.48
CHD3-204ENST00000439235 LRRN1Q6UXK5 716 aa18.08■□□□□ 0.48
CHD3-204ENST00000439235 SPATC1Q76KD6 591 aa18.08■□□□□ 0.48
CHD3-204ENST00000439235 HIST2H2ABQ8IUE6 130 aaPredicted RBP18.08■□□□□ 0.48
CHD3-204ENST00000439235 ALDH16A1Q8IZ83 802 aa18.08■□□□□ 0.48
CHD3-204ENST00000439235 YIPF7Q8N8F6 280 aa18.08■□□□□ 0.48
CHD3-204ENST00000439235 OR10S1Q8NGN2 331 aa18.08■□□□□ 0.48
CHD3-204ENST00000439235 FGFBP3Q8TAT2 258 aa18.08■□□□□ 0.48
CHD3-204ENST00000439235 RORBQ92753 470 aa18.08■□□□□ 0.48
CHD3-204ENST00000439235 ATF6BQ99941 703 aa18.08■□□□□ 0.48
CHD3-204ENST00000439235 WNT5BQ9H1J7 359 aa18.08■□□□□ 0.48
CHD3-204ENST00000439235 NIPAL2Q9H841 368 aa18.08■□□□□ 0.48
CHD3-204ENST00000439235 PNRC2Q9NPJ4 139 aaKnown RBP18.08■□□□□ 0.48
CHD3-204ENST00000439235 DDX28Q9NUL7 540 aaKnown RBP18.08■□□□□ 0.48
CHD3-204ENST00000439235 MRM2Q9UI43 246 aaKnown RBP18.08■□□□□ 0.48
CHD3-204ENST00000439235 ATPIF1Q9UII2 106 aa18.08■□□□□ 0.48
CHD3-204ENST00000439235 FBXL3Q9UKT7 428 aa18.08■□□□□ 0.48
CHD3-204ENST00000439235 LSM2Q9Y333 95 aaKnown RBP18.08■□□□□ 0.48
CHD3-204ENST00000439235 PSMD9O00233 223 aa18.07■□□□□ 0.48
CHD3-204ENST00000439235 OR12D2P58182 307 aa18.07■□□□□ 0.48
CHD3-204ENST00000439235 RAB1AP62820 205 aa18.07■□□□□ 0.48
CHD3-204ENST00000439235 TUBA1BP68363 451 aa18.07■□□□□ 0.48
CHD3-204ENST00000439235 PSG4Q00888 419 aa18.07■□□□□ 0.48
CHD3-204ENST00000439235 FAM27E3Q08E93 113 aa18.07■□□□□ 0.48
CHD3-204ENST00000439235 PABPC1L2AQ5JQF8 200 aa18.07■□□□□ 0.48
CHD3-204ENST00000439235 TIMM23BQ5SRD1 257 aa18.07■□□□□ 0.48
CHD3-204ENST00000439235 XKRXQ6PP77 449 aa18.07■□□□□ 0.48
CHD3-204ENST00000439235 TUBA1AQ71U36 451 aa18.07■□□□□ 0.48
CHD3-204ENST00000439235 VASH1Q7L8A9 365 aaPredicted RBP18.07■□□□□ 0.48
CHD3-204ENST00000439235 COQ7Q99807 217 aa18.07■□□□□ 0.48
CHD3-204ENST00000439235 ACTR6Q9GZN1 396 aa18.07■□□□□ 0.48
CHD3-204ENST00000439235 ISG20L2Q9H9L3 353 aaKnown RBP18.07■□□□□ 0.48
CHD3-204ENST00000439235 ELOVL3Q9HB03 270 aa18.07■□□□□ 0.48
CHD3-204ENST00000439235 TRIM36Q9NQ86 728 aa18.07■□□□□ 0.48
CHD3-204ENST00000439235 B3GNT2Q9NY97 397 aa18.07■□□□□ 0.48
CHD3-204ENST00000439235 LRP12Q9Y561 859 aa18.07■□□□□ 0.48
CHD3-204ENST00000439235 POLEQ07864 2286 aa18.07■□□□□ 0.48
CHD3-204ENST00000439235 ABHD16AO95870 558 aa18.06■□□□□ 0.48
CHD3-204ENST00000439235 LCKP06239 509 aa18.06■□□□□ 0.48
CHD3-204ENST00000439235 COX5BP10606 129 aa18.06■□□□□ 0.48
CHD3-204ENST00000439235 JUNBP17275 347 aaPredicted RBP18.06■□□□□ 0.48
CHD3-204ENST00000439235 HSD11B1P28845 292 aa18.06■□□□□ 0.48
CHD3-204ENST00000439235 UGT2B10P36537 528 aa18.06■□□□□ 0.48
CHD3-204ENST00000439235 HTR5AP47898 357 aa18.06■□□□□ 0.48
CHD3-204ENST00000439235 GBX2P52951 348 aaPredicted RBP18.06■□□□□ 0.48
CHD3-204ENST00000439235 NR1H2P55055 460 aa18.06■□□□□ 0.48
CHD3-204ENST00000439235 TAS2R43P59537 309 aa18.06■□□□□ 0.48
CHD3-204ENST00000439235 BDH1Q02338 343 aa18.06■□□□□ 0.48
CHD3-204ENST00000439235 XAF1Q6GPH4 301 aa18.06■□□□□ 0.48
CHD3-204ENST00000439235 ZNF774Q6NX45 483 aa18.06■□□□□ 0.48
CHD3-204ENST00000439235 SSX8Q7RTT4 187 aa18.06■□□□□ 0.48
CHD3-204ENST00000439235 ZNF808Q8N4W9 903 aaPredicted RBP18.06■□□□□ 0.48
CHD3-204ENST00000439235 WDR31Q8NA23 367 aa18.06■□□□□ 0.48
CHD3-204ENST00000439235 ZNF485Q8NCK3 441 aa18.06■□□□□ 0.48
CHD3-204ENST00000439235 OR1F12Q8NHA8 337 aa18.06■□□□□ 0.48
CHD3-204ENST00000439235 AKR7LQ8NHP1 331 aa18.06■□□□□ 0.48
CHD3-204ENST00000439235 GATAD2BQ8WXI9 593 aa18.06■□□□□ 0.48
CHD3-204ENST00000439235 RNASE6Q93091 150 aaKnown RBP18.06■□□□□ 0.48
CHD3-204ENST00000439235 S100PBPQ96BU1 408 aa18.06■□□□□ 0.48
CHD3-204ENST00000439235 OR5M11Q96RB7 305 aa18.06■□□□□ 0.48
CHD3-204ENST00000439235 KCNJ16Q9NPI9 418 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms