RNA–Protein interactions for RNA: ENST00000439008.1

LINC00399-201, long intergenic non-protein coding RNA 399, humanhuman

TSL 2 BASIC

Gene LINC00399, Length 414 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00399-201ENST00000439008 COX10Q12887 443 aa11.35□□□□□ -0.59
LINC00399-201ENST00000439008 HNRNPA0Q13151 305 aaKnown RBP11.35□□□□□ -0.59
LINC00399-201ENST00000439008 GK3PQ14409 553 aa11.35□□□□□ -0.59
LINC00399-201ENST00000439008 TMEM236Q5W0B7 351 aa11.35□□□□□ -0.59
LINC00399-201ENST00000439008 SLC18B1Q6NT16 456 aa11.35□□□□□ -0.59
LINC00399-201ENST00000439008 FAHD1Q6P587 224 aa11.35□□□□□ -0.59
LINC00399-201ENST00000439008 AMIGO2Q86SJ2 522 aa11.35□□□□□ -0.59
LINC00399-201ENST00000439008 BIVMQ86UB2 503 aa11.35□□□□□ -0.59
LINC00399-201ENST00000439008 ZNF511Q8NB15 262 aa11.35□□□□□ -0.59
LINC00399-201ENST00000439008 ABHD4Q8TB40 342 aa11.35□□□□□ -0.59
LINC00399-201ENST00000439008 SLC25A40Q8TBP6 338 aa11.35□□□□□ -0.59
LINC00399-201ENST00000439008 IPCEF1Q8WWN9 437 aaPredicted RBP11.35□□□□□ -0.59
LINC00399-201ENST00000439008 PTP4A1Q93096 173 aa11.35□□□□□ -0.59
LINC00399-201ENST00000439008 MAP6Q96JE9 813 aa11.35□□□□□ -0.59
LINC00399-201ENST00000439008 C4orf45Q96LM5 186 aa11.35□□□□□ -0.59
LINC00399-201ENST00000439008 MMADHCQ9H3L0 296 aaPredicted RBP11.35□□□□□ -0.59
LINC00399-201ENST00000439008 WDR76Q9H967 626 aa11.35□□□□□ -0.59
LINC00399-201ENST00000439008 PLEK2Q9NYT0 353 aa11.35□□□□□ -0.59
LINC00399-201ENST00000439008 TAAR3PQ9P1P4 343 aa11.35□□□□□ -0.59
LINC00399-201ENST00000439008 CYB5R1Q9UHQ9 305 aa11.35□□□□□ -0.59
LINC00399-201ENST00000439008 STARD10Q9Y365 291 aa11.35□□□□□ -0.59
LINC00399-201ENST00000439008 HIVEP2P31629 2446 aa11.35□□□□□ -0.59
LINC00399-201ENST00000439008 MALRD1Q5VYJ5 2156 aa11.34□□□□□ -0.59
LINC00399-201ENST00000439008 M0R233 179 aa11.34□□□□□ -0.59
LINC00399-201ENST00000439008 MITFO75030 526 aaPredicted RBP11.34□□□□□ -0.59
LINC00399-201ENST00000439008 IGHV3-13P01766 116 aa11.34□□□□□ -0.59
LINC00399-201ENST00000439008 HPXP02790 462 aa11.34□□□□□ -0.59
LINC00399-201ENST00000439008 BMP4P12644 408 aa11.34□□□□□ -0.59
LINC00399-201ENST00000439008 SPI1P17947 270 aa11.34□□□□□ -0.59
LINC00399-201ENST00000439008 POU1F1P28069 291 aa11.34□□□□□ -0.59
LINC00399-201ENST00000439008 EPHA2P29317 976 aa11.34□□□□□ -0.59
LINC00399-201ENST00000439008 RAD52P43351 418 aa11.34□□□□□ -0.59
LINC00399-201ENST00000439008 PPP1CBP62140 327 aa11.34□□□□□ -0.59
LINC00399-201ENST00000439008 CDK5Q00535 292 aa11.34□□□□□ -0.59
LINC00399-201ENST00000439008 GLO1Q04760 184 aa11.34□□□□□ -0.59
LINC00399-201ENST00000439008 GINS1Q14691 196 aa11.34□□□□□ -0.59
LINC00399-201ENST00000439008 ATP6AP1Q15904 470 aa11.34□□□□□ -0.59
LINC00399-201ENST00000439008 KRTAP27-1Q3LI81 207 aa11.34□□□□□ -0.59
LINC00399-201ENST00000439008 SPRNQ5BIV9 151 aa11.34□□□□□ -0.59
LINC00399-201ENST00000439008 ELFN2Q5R3F8 820 aa11.34□□□□□ -0.59
LINC00399-201ENST00000439008 LINC01590Q5TEZ4 76 aa11.34□□□□□ -0.59
LINC00399-201ENST00000439008 SHQ1Q6PI26 577 aaKnown RBP11.34□□□□□ -0.59
LINC00399-201ENST00000439008 DNM1P34Q6PK57 102 aa11.34□□□□□ -0.59
LINC00399-201ENST00000439008 CLEC9AQ6UXN8 241 aa11.34□□□□□ -0.59
LINC00399-201ENST00000439008 NAA40Q86UY6 237 aa11.34□□□□□ -0.59
LINC00399-201ENST00000439008 ALDH16A1Q8IZ83 802 aa11.34□□□□□ -0.59
LINC00399-201ENST00000439008 OR2T33Q8NG76 320 aa11.34□□□□□ -0.59
LINC00399-201ENST00000439008 OR1F12Q8NHA8 337 aa11.34□□□□□ -0.59
LINC00399-201ENST00000439008 SYNPRQ8TBG9 265 aa11.34□□□□□ -0.59
LINC00399-201ENST00000439008 KLF14Q8TD94 323 aaPredicted RBP11.34□□□□□ -0.59
LINC00399-201ENST00000439008 LRTOMTQ8WZ04 291 aa11.34□□□□□ -0.59
LINC00399-201ENST00000439008 FAM168AQ92567 244 aa11.34□□□□□ -0.59
LINC00399-201ENST00000439008 WACQ9BTA9 647 aa11.34□□□□□ -0.59
LINC00399-201ENST00000439008 BCL2L14Q9BZR8 327 aa11.34□□□□□ -0.59
LINC00399-201ENST00000439008 DYNLRB1Q9NP97 96 aa11.34□□□□□ -0.59
LINC00399-201ENST00000439008 CMC2Q9NRP2 79 aa11.34□□□□□ -0.59
LINC00399-201ENST00000439008 GRIP1Q9Y3R0 1128 aa11.34□□□□□ -0.59
LINC00399-201ENST00000439008 AP4S1Q9Y587 144 aa11.34□□□□□ -0.59
LINC00399-201ENST00000439008 ANK3Q12955 4377 aaKnown RBP11.34□□□□□ -0.59
LINC00399-201ENST00000439008 C5orf63A6NC05 138 aa11.33□□□□□ -0.6
LINC00399-201ENST00000439008 VSTM5A8MXK1 200 aa11.33□□□□□ -0.6
LINC00399-201ENST00000439008 H3BN98 237 aa11.33□□□□□ -0.6
LINC00399-201ENST00000439008 OSMP13725 252 aa11.33□□□□□ -0.6
LINC00399-201ENST00000439008 DAOP14920 347 aa11.33□□□□□ -0.6
LINC00399-201ENST00000439008 HOXB6P17509 224 aaKnown RBP11.33□□□□□ -0.6
LINC00399-201ENST00000439008 COL8A2P25067 703 aa11.33□□□□□ -0.6
LINC00399-201ENST00000439008 GRK5P34947 590 aa11.33□□□□□ -0.6
LINC00399-201ENST00000439008 MAGEB1P43366 347 aa11.33□□□□□ -0.6
LINC00399-201ENST00000439008 MMP15P51511 669 aa11.33□□□□□ -0.6
LINC00399-201ENST00000439008 SLC25A1P53007 311 aa11.33□□□□□ -0.6
LINC00399-201ENST00000439008 KLF3P57682 345 aaPredicted RBP11.33□□□□□ -0.6
LINC00399-201ENST00000439008 TMEM154Q6P9G4 183 aa11.33□□□□□ -0.6
LINC00399-201ENST00000439008 CLEC2AQ6UVW9 174 aa11.33□□□□□ -0.6
LINC00399-201ENST00000439008 CCDC121Q6ZUS5 278 aa11.33□□□□□ -0.6
LINC00399-201ENST00000439008 TEX47Q8TBZ9 253 aa11.33□□□□□ -0.6
LINC00399-201ENST00000439008 YIPF5Q969M3 257 aa11.33□□□□□ -0.6
LINC00399-201ENST00000439008 RHNO1Q9BSD3 238 aa11.33□□□□□ -0.6
LINC00399-201ENST00000439008 RAB1BQ9H0U4 201 aa11.33□□□□□ -0.6
LINC00399-201ENST00000439008 YY1AP1Q9H869 796 aa11.33□□□□□ -0.6
LINC00399-201ENST00000439008 KLHL21Q9UJP4 597 aa11.33□□□□□ -0.6
LINC00399-201ENST00000439008 BAIAP2Q9UQB8 552 aa11.33□□□□□ -0.6
LINC00399-201ENST00000439008 COMMD3-BMI1R4GMX3 469 aa11.33□□□□□ -0.6
LINC00399-201ENST00000439008 A0A1W2PPW3 197 aa11.32□□□□□ -0.6
LINC00399-201ENST00000439008 ZSCAN5BA6NJL1 495 aa11.32□□□□□ -0.6
LINC00399-201ENST00000439008 H3BNX3 289 aa11.32□□□□□ -0.6
LINC00399-201ENST00000439008 DEAF1O75398 565 aaPredicted RBP11.32□□□□□ -0.6
LINC00399-201ENST00000439008 ABHD16AO95870 558 aa11.32□□□□□ -0.6
LINC00399-201ENST00000439008 HEXAP06865 529 aa11.32□□□□□ -0.6
LINC00399-201ENST00000439008 ANXA8P13928 327 aa11.32□□□□□ -0.6
LINC00399-201ENST00000439008 DSCR9P59020 149 aa11.32□□□□□ -0.6
LINC00399-201ENST00000439008 PSG7Q13046 419 aa11.32□□□□□ -0.6
LINC00399-201ENST00000439008 KPNB1Q14974 876 aaKnown RBP11.32□□□□□ -0.6
LINC00399-201ENST00000439008 CARTPTQ16568 116 aa11.32□□□□□ -0.6
LINC00399-201ENST00000439008 PCK2Q16822 640 aa11.32□□□□□ -0.6
LINC00399-201ENST00000439008 MBNL2Q5VZF2 373 aaKnown RBP11.32□□□□□ -0.6
LINC00399-201ENST00000439008 ATG16L2Q8NAA4 619 aa11.32□□□□□ -0.6
LINC00399-201ENST00000439008 PROKR2Q8NFJ6 384 aa11.32□□□□□ -0.6
LINC00399-201ENST00000439008 BBS1Q8NFJ9 593 aa11.32□□□□□ -0.6
LINC00399-201ENST00000439008 GJC3Q8NFK1 279 aa11.32□□□□□ -0.6
LINC00399-201ENST00000439008 OR2T4Q8NH00 348 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms