RNA–Protein interactions for RNA: ENST00000438395.5

VPS50-204, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 3

Gene VPS50, Length 538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-204ENST00000438395 FAM220BPB1ANY3 271 aa6.57□□□□□ -1.36
VPS50-204ENST00000438395 FBP2O00757 339 aa6.57□□□□□ -1.36
VPS50-204ENST00000438395 PAX4O43316 350 aa6.57□□□□□ -1.36
VPS50-204ENST00000438395 SGCEO43556 437 aa6.57□□□□□ -1.36
VPS50-204ENST00000438395 PIP5K1CO60331 668 aa6.57□□□□□ -1.36
VPS50-204ENST00000438395 UBOX5O94941 541 aa6.57□□□□□ -1.36
VPS50-204ENST00000438395 ZNF682O95780 498 aa6.57□□□□□ -1.36
VPS50-204ENST00000438395 IGHMP01871 453 aa6.57□□□□□ -1.36
VPS50-204ENST00000438395 ADH4P08319 380 aa6.57□□□□□ -1.36
VPS50-204ENST00000438395 TUBG1P23258 451 aa6.57□□□□□ -1.36
VPS50-204ENST00000438395 COMPP49747 757 aaPredicted RBP6.57□□□□□ -1.36
VPS50-204ENST00000438395 MMP15P51511 669 aa6.57□□□□□ -1.36
VPS50-204ENST00000438395 ZNF133P52736 654 aaPredicted RBP6.57□□□□□ -1.36
VPS50-204ENST00000438395 ARFIP2P53365 341 aa6.57□□□□□ -1.36
VPS50-204ENST00000438395 CRYBA2P53672 197 aa6.57□□□□□ -1.36
VPS50-204ENST00000438395 ID3Q02535 119 aa6.57□□□□□ -1.36
VPS50-204ENST00000438395 TRAM2Q15035 370 aa6.57□□□□□ -1.36
VPS50-204ENST00000438395 C1orf94Q6P1W5 598 aa6.57□□□□□ -1.36
VPS50-204ENST00000438395 FKBP9P1Q75LS8 142 aa6.57□□□□□ -1.36
VPS50-204ENST00000438395 NRMQ8IXM6 262 aa6.57□□□□□ -1.36
VPS50-204ENST00000438395 OR2Z1Q8NG97 314 aa6.57□□□□□ -1.36
VPS50-204ENST00000438395 OR51A7Q8NH64 312 aa6.57□□□□□ -1.36
VPS50-204ENST00000438395 C10orf82Q8WW14 230 aa6.57□□□□□ -1.36
VPS50-204ENST00000438395 C22orf15Q8WYQ4 148 aa6.57□□□□□ -1.36
VPS50-204ENST00000438395 ZNF570Q96NI8 536 aa6.57□□□□□ -1.36
VPS50-204ENST00000438395 GPA33Q99795 319 aa6.57□□□□□ -1.36
VPS50-204ENST00000438395 WACQ9BTA9 647 aa6.57□□□□□ -1.36
VPS50-204ENST00000438395 RERGLQ9H628 205 aa6.57□□□□□ -1.36
VPS50-204ENST00000438395 ZMAT3Q9HA38 289 aaKnown RBP6.57□□□□□ -1.36
VPS50-204ENST00000438395 EMC7Q9NPA0 242 aa6.57□□□□□ -1.36
VPS50-204ENST00000438395 KRCC1Q9NPI7 259 aaPredicted RBP6.57□□□□□ -1.36
VPS50-204ENST00000438395 TUBG2Q9NRH3 451 aa6.57□□□□□ -1.36
VPS50-204ENST00000438395 TMEM106BQ9NUM4 274 aa6.57□□□□□ -1.36
VPS50-204ENST00000438395 PLEK2Q9NYT0 353 aa6.57□□□□□ -1.36
VPS50-204ENST00000438395 PURGQ9UJV8 347 aaKnown RBP6.57□□□□□ -1.36
VPS50-204ENST00000438395 PPP1R3CQ9UQK1 317 aa6.57□□□□□ -1.36
VPS50-204ENST00000438395 TMEM5Q9Y2B1 443 aa6.57□□□□□ -1.36
VPS50-204ENST00000438395 AP3M1Q9Y2T2 418 aa6.57□□□□□ -1.36
VPS50-204ENST00000438395 PPIAL4AQ9Y536 164 aa6.57□□□□□ -1.36
VPS50-204ENST00000438395 NPTNQ9Y639 398 aa6.57□□□□□ -1.36
VPS50-204ENST00000438395 AUP1Q9Y679 476 aa6.57□□□□□ -1.36
VPS50-204ENST00000438395 CAPN7Q9Y6W3 813 aa6.57□□□□□ -1.36
VPS50-204ENST00000438395 MEGF8Q7Z7M0 2845 aa6.56□□□□□ -1.36
VPS50-204ENST00000438395 PPIAL4EA0A075B759 164 aa6.56□□□□□ -1.36
VPS50-204ENST00000438395 IGKV1D-43A0A0B4J1Z2 117 aa6.56□□□□□ -1.36
VPS50-204ENST00000438395 PPIAL4CA0A0B4J2A2 164 aa6.56□□□□□ -1.36
VPS50-204ENST00000438395 ELOVL7A1L3X0 281 aa6.56□□□□□ -1.36
VPS50-204ENST00000438395 TMEM89A2RUT3 159 aa6.56□□□□□ -1.36
VPS50-204ENST00000438395 LRRC30A6NM36 301 aa6.56□□□□□ -1.36
VPS50-204ENST00000438395 PPIAL4DF5H284 164 aa6.56□□□□□ -1.36
VPS50-204ENST00000438395 H7C1C5 153 aa6.56□□□□□ -1.36
VPS50-204ENST00000438395 IFNL4K9M1U5 179 aa6.56□□□□□ -1.36
VPS50-204ENST00000438395 FXYD1O00168 92 aa6.56□□□□□ -1.36
VPS50-204ENST00000438395 FBXO24O75426 580 aa6.56□□□□□ -1.36
VPS50-204ENST00000438395 NGFP01138 241 aa6.56□□□□□ -1.36
VPS50-204ENST00000438395 CD55P08174 381 aa6.56□□□□□ -1.36
VPS50-204ENST00000438395 PPIAL4FP0DN26 164 aa6.56□□□□□ -1.36
VPS50-204ENST00000438395 KDELR2P33947 212 aa6.56□□□□□ -1.36
VPS50-204ENST00000438395 MDH2P40926 338 aaKnown RBP6.56□□□□□ -1.36
VPS50-204ENST00000438395 YAP1P46937 504 aaKnown RBP6.56□□□□□ -1.36
VPS50-204ENST00000438395 SLC9A3P48764 834 aa6.56□□□□□ -1.36
VPS50-204ENST00000438395 CENPAP49450 140 aa6.56□□□□□ -1.36
VPS50-204ENST00000438395 BTG1P62324 171 aa6.56□□□□□ -1.36
VPS50-204ENST00000438395 LCN6P62502 163 aa6.56□□□□□ -1.36
VPS50-204ENST00000438395 UBA52P62987 128 aaKnown RBP6.56□□□□□ -1.36
VPS50-204ENST00000438395 GUCY1A3Q02108 690 aa6.56□□□□□ -1.36
VPS50-204ENST00000438395 FOXL1Q12952 345 aa6.56□□□□□ -1.36
VPS50-204ENST00000438395 IFI44LQ53G44 452 aa6.56□□□□□ -1.36
VPS50-204ENST00000438395 AWAT1Q58HT5 328 aa6.56□□□□□ -1.36
VPS50-204ENST00000438395 SLC25A47Q6Q0C1 308 aa6.56□□□□□ -1.36
VPS50-204ENST00000438395 BTNL3Q6UXE8 466 aa6.56□□□□□ -1.36
VPS50-204ENST00000438395 NLRC3Q7RTR2 1065 aa6.56□□□□□ -1.36
VPS50-204ENST00000438395 CALHM3Q86XJ0 350 aa6.56□□□□□ -1.36
VPS50-204ENST00000438395 OFCC1Q8IZS5 231 aa6.56□□□□□ -1.36
VPS50-204ENST00000438395 MUC20Q8N307 709 aaPredicted RBP6.56□□□□□ -1.36
VPS50-204ENST00000438395 CLDN22Q8N7P3 220 aa6.56□□□□□ -1.36
VPS50-204ENST00000438395 SIGLECL1Q8N7X8 197 aa6.56□□□□□ -1.36
VPS50-204ENST00000438395 ATG16L2Q8NAA4 619 aa6.56□□□□□ -1.36
VPS50-204ENST00000438395 OR13C2Q8NGS9 318 aa6.56□□□□□ -1.36
VPS50-204ENST00000438395 ACOT11Q8WXI4 607 aaPredicted RBP6.56□□□□□ -1.36
VPS50-204ENST00000438395 POP5Q969H6 163 aaKnown RBP6.56□□□□□ -1.36
VPS50-204ENST00000438395 NMD3Q96D46 503 aaKnown RBP6.56□□□□□ -1.36
VPS50-204ENST00000438395 VIPAS39Q9H9C1 493 aa6.56□□□□□ -1.36
VPS50-204ENST00000438395 POLE4Q9NR33 117 aa6.56□□□□□ -1.36
VPS50-204ENST00000438395 RHCGQ9UBD6 479 aa6.56□□□□□ -1.36
VPS50-204ENST00000438395 NUP50Q9UKX7 468 aa6.56□□□□□ -1.36
VPS50-204ENST00000438395 FAM32AQ9Y421 112 aaKnown RBP6.56□□□□□ -1.36
VPS50-204ENST00000438395 RNF114Q9Y508 228 aa6.56□□□□□ -1.36
VPS50-204ENST00000438395 LOC100653049A0A140TA62 436 aa6.55□□□□□ -1.36
VPS50-204ENST00000438395 PRSS37A4D1T9 235 aa6.55□□□□□ -1.36
VPS50-204ENST00000438395 AHCYL1O43865 530 aa6.55□□□□□ -1.36
VPS50-204ENST00000438395 GMNNO75496 209 aa6.55□□□□□ -1.36
VPS50-204ENST00000438395 KRT34O76011 436 aa6.55□□□□□ -1.36
VPS50-204ENST00000438395 IGHV2-70P01814 119 aa6.55□□□□□ -1.36
VPS50-204ENST00000438395 CD14P08571 375 aa6.55□□□□□ -1.36
VPS50-204ENST00000438395 TSPAN19P0C672 248 aa6.55□□□□□ -1.36
VPS50-204ENST00000438395 COX5BP10606 129 aa6.55□□□□□ -1.36
VPS50-204ENST00000438395 RPS2P15880 293 aaKnown RBP6.55□□□□□ -1.36
VPS50-204ENST00000438395 GPR4P46093 362 aa6.55□□□□□ -1.36
VPS50-204ENST00000438395 MTNR1AP48039 350 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms